RNA–Protein interactions for RNA: YMR004W

MVP1, Transcript of Protein required for sorting proteins to the vacuole, yeastyeast

Gene MVP1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MVP1YMR004W BUD23P25627 275 aaPredicted RBP0.66□□□□□ -2.3
MVP1YMR004W RSM19P53733 91 aaPredicted RBP0.66□□□□□ -2.3
MVP1YMR004W SNA2P56508 79 aa0.66□□□□□ -2.3
MVP1YMR004W YRF1-3P0CX14 1859 aa0.66□□□□□ -2.3
MVP1YMR004W YRF1-7P0CX15 1859 aa0.66□□□□□ -2.3
MVP1YMR004W RSF2P46974 1380 aa0.66□□□□□ -2.3
MVP1YMR004W PDX3P38075 228 aaKnown RBP0.65□□□□□ -2.31
MVP1YMR004W YHL005CP38752 130 aa0.65□□□□□ -2.31
MVP1YMR004W MSL1P40567 111 aaPredicted RBP0.65□□□□□ -2.31
MVP1YMR004W YIR020CP40575 100 aa0.65□□□□□ -2.31
MVP1YMR004W PAU15P40585 124 aa0.65□□□□□ -2.31
MVP1YMR004W IMP2P46972 177 aa0.65□□□□□ -2.31
MVP1YMR004W RPL37AP49166 88 aaKnown RBP0.65□□□□□ -2.31
MVP1YMR004W NHP10Q03435 203 aa0.65□□□□□ -2.31
MVP1YMR004W SUS1Q6WNK7 96 aa0.65□□□□□ -2.31
MVP1YMR004W YCL001W-BQ96VH2 84 aa0.65□□□□□ -2.31
MVP1YMR004W MIC10Q96VH5 97 aa0.65□□□□□ -2.31
MVP1YMR004W TY1B-HO13535 1793 aa0.65□□□□□ -2.31
MVP1YMR004W PAU16P35994 123 aa0.64□□□□□ -2.31
MVP1YMR004W SNU13P39990 126 aaKnown RBP0.64□□□□□ -2.31
MVP1YMR004W YJR128WP47162 119 aa0.64□□□□□ -2.31
MVP1YMR004W COX19Q3E731 98 aa0.64□□□□□ -2.31
MVP1YMR004W NTE1Q04958 1679 aa0.64□□□□□ -2.31
MVP1YMR004W BPT1P14772 1559 aa0.64□□□□□ -2.31
MVP1YMR004W SRB8P25648 1427 aa0.64□□□□□ -2.31
MVP1YMR004W AIM19P40502 157 aa0.64□□□□□ -2.31
MVP1YMR004W YIL086CP40503 102 aa0.64□□□□□ -2.31
MVP1YMR004W YCR095W-AQ3E787 52 aa0.64□□□□□ -2.31
MVP1YMR004W YBR072C-AQ3E794 53 aa0.64□□□□□ -2.31
MVP1YMR004W YPL038W-AQ3E7B4 63 aa0.64□□□□□ -2.31
MVP1YMR004W MHF2Q3E829 80 aa0.64□□□□□ -2.31
MVP1YMR004W URA2P07259 2214 aaKnown RBP0.63□□□□□ -2.31
MVP1YMR004W CCW14O13547 238 aa0.63□□□□□ -2.31
MVP1YMR004W RPL43AP0CX25 92 aaKnown RBP0.63□□□□□ -2.31
MVP1YMR004W RPL43BP0CX26 92 aa0.63□□□□□ -2.31
MVP1YMR004W YBR292CP38357 123 aa0.63□□□□□ -2.31
MVP1YMR004W KSH1Q8TGJ3 72 aa0.63□□□□□ -2.31
MVP1YMR004W SEC7P11075 2009 aaKnown RBP0.63□□□□□ -2.31
MVP1YMR004W ROX3P25046 220 aa0.62□□□□□ -2.31
MVP1YMR004W RSM18P40033 138 aa0.62□□□□□ -2.31
MVP1YMR004W RPL37BP51402 88 aaKnown RBP0.62□□□□□ -2.31
MVP1YMR004W MRX7P53869 86 aa0.62□□□□□ -2.31
MVP1YMR004W LCL1Q02786 101 aa0.62□□□□□ -2.31
MVP1YMR004W YDR029WQ12111 104 aa0.62□□□□□ -2.31
MVP1YMR004W YKL068W-AQ3E826 78 aa0.62□□□□□ -2.31
MVP1YMR004W SWR1Q05471 1514 aa0.62□□□□□ -2.31
MVP1YMR004W YRF1-6P53819 1859 aa0.61□□□□□ -2.31
MVP1YMR004W ECM12O13529 151 aa0.61□□□□□ -2.31
MVP1YMR004W HMRA1P0CY11 126 aa0.61□□□□□ -2.31
MVP1YMR004W NHP2P32495 156 aaPredicted RBP0.61□□□□□ -2.31
MVP1YMR004W SHU1P38751 150 aa0.61□□□□□ -2.31
MVP1YMR004W MPC2P38857 129 aa0.61□□□□□ -2.31
MVP1YMR004W MRPS12P53732 153 aa0.61□□□□□ -2.31
MVP1YMR004W PAU20Q08322 120 aa0.61□□□□□ -2.31
MVP1YMR004W YOR034C-AQ3E735 80 aa0.61□□□□□ -2.31
MVP1YMR004W BRR2P32639 2163 aaKnown RBP0.61□□□□□ -2.31
MVP1YMR004W SEC16P48415 2195 aaKnown RBP0.61□□□□□ -2.31
MVP1YMR004W YER188C-AP0C0V2 99 aa0.6□□□□□ -2.31
MVP1YMR004W PAU1P0CE88 120 aa0.6□□□□□ -2.31
MVP1YMR004W PAU14P0CE89 120 aa0.6□□□□□ -2.31
MVP1YMR004W PAU6P0CE90 120 aa0.6□□□□□ -2.31
MVP1YMR004W PAU18P0CE91 120 aa0.6□□□□□ -2.31
MVP1YMR004W PAU8P0CE92 120 aa0.6□□□□□ -2.31
MVP1YMR004W PAU11P0CE93 120 aa0.6□□□□□ -2.31
MVP1YMR004W PAU13P38725 120 aa0.6□□□□□ -2.31
MVP1YMR004W YHR173CP38864 112 aa0.6□□□□□ -2.31
MVP1YMR004W PAU10Q03050 120 aa0.6□□□□□ -2.31
MVP1YMR004W PAU9Q3E770 120 aa0.6□□□□□ -2.31
MVP1YMR004W RPA190P10964 1664 aaKnown RBP0.6□□□□□ -2.31
MVP1YMR004W MYO1P08964 1928 aa0.6□□□□□ -2.31
MVP1YMR004W PDR10P51533 1564 aa0.6□□□□□ -2.31
MVP1YMR004W URB1P34241 1764 aaKnown RBP0.59□□□□□ -2.31
MVP1YMR004W PAU5P43575 122 aa0.59□□□□□ -2.31
MVP1YMR004W YDR010CQ12426 110 aa0.59□□□□□ -2.31
MVP1YMR004W YCR075W-AQ3E830 75 aa0.59□□□□□ -2.31
MVP1YMR004W LTE1P07866 1435 aa0.59□□□□□ -2.31
MVP1YMR004W SSN2P38931 1420 aa0.59□□□□□ -2.31
MVP1YMR004W BNI1P41832 1953 aa0.59□□□□□ -2.32
MVP1YMR004W PAU4P53427 120 aa0.59□□□□□ -2.32
MVP1YMR004W BSC4P53841 131 aa0.59□□□□□ -2.32
MVP1YMR004W YDR042CQ03205 200 aa0.59□□□□□ -2.32
MVP1YMR004W ICY1Q04329 127 aa0.59□□□□□ -2.32
MVP1YMR004W YLR255CO13574 117 aa0.58□□□□□ -2.32
MVP1YMR004W YBL071CP38185 102 aa0.58□□□□□ -2.32
MVP1YMR004W ATX1P38636 73 aa0.58□□□□□ -2.32
MVP1YMR004W POL2P21951 2222 aaKnown RBP0.57□□□□□ -2.32
MVP1YMR004W GDB1Q06625 1536 aa0.57□□□□□ -2.32
MVP1YMR004W TY4B-HP0C2J7 1802 aa0.57□□□□□ -2.32
MVP1YMR004W YDR210WQ03482 75 aa0.57□□□□□ -2.32
MVP1YMR004W RRT15Q3E811 62 aa0.57□□□□□ -2.32
MVP1YMR004W YLR307C-AQ3E825 87 aa0.57□□□□□ -2.32
MVP1YMR004W BLM10P43583 2143 aa0.57□□□□□ -2.32
MVP1YMR004W ESP1Q03018 1630 aa0.56□□□□□ -2.32
MVP1YMR004W PRP8P33334 2413 aaKnown RBP0.56□□□□□ -2.32
MVP1YMR004W YLR157W-EP0CF00 54 aa0.56□□□□□ -2.32
MVP1YMR004W YHR214C-DP0CX93 97 aa0.56□□□□□ -2.32
MVP1YMR004W COX7P10174 60 aa0.56□□□□□ -2.32
MVP1YMR004W SPC1P46965 94 aa0.56□□□□□ -2.32
MVP1YMR004W RPL38P49167 78 aaKnown RBP0.56□□□□□ -2.32
MVP1YMR004W YMR082CQ04276 118 aa0.56□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms