RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	YGL230C	P53074	147 aa		0.87	□□□□□ -2.27
RIC1	YLR039C	YLR365W	Q7LIF2	110 aa		0.87	□□□□□ -2.27
RIC1	YLR039C	YHR140W	P38842	239 aa		0.86	□□□□□ -2.27
RIC1	YLR039C	HUA1	P40325	198 aa		0.86	□□□□□ -2.27
RIC1	YLR039C	GNA1	P43577	159 aa	Predicted RBP	0.86	□□□□□ -2.27
RIC1	YLR039C	COF1	Q03048	143 aa	Known RBP	0.86	□□□□□ -2.27
RIC1	YLR039C	ERI1	P62651	68 aa	Known RBP	0.86	□□□□□ -2.27
RIC1	YLR039C	HOR7	Q05827	59 aa		0.86	□□□□□ -2.27
RIC1	YLR039C	YGL258W-A	Q3E740	77 aa		0.86	□□□□□ -2.27
RIC1	YLR039C	TRA1	P38811	3744 aa		0.86	□□□□□ -2.27
RIC1	YLR039C	SEN1	Q00416	2231 aa	Known RBP	0.86	□□□□□ -2.27
RIC1	YLR039C	YKR070W	P36151	352 aa	Known RBP	0.86	□□□□□ -2.27
RIC1	YLR039C	YHR138C	P38841	114 aa	Predicted RBP	0.86	□□□□□ -2.27
RIC1	YLR039C	YNL019C	P53975	284 aa		0.86	□□□□□ -2.27
RIC1	YLR039C	YDR366C	P87287	132 aa		0.86	□□□□□ -2.27
RIC1	YLR039C	FCY1	Q12178	158 aa		0.86	□□□□□ -2.27
RIC1	YLR039C	YGR240C-A	Q3E786	66 aa		0.86	□□□□□ -2.27
RIC1	YLR039C	HFA1	P32874	2273 aa		0.85	□□□□□ -2.27
RIC1	YLR039C	MRP49	P32388	137 aa		0.85	□□□□□ -2.27
RIC1	YLR039C	YCL001W-A	P87012	153 aa		0.85	□□□□□ -2.27
RIC1	YLR039C	MIX14	Q04341	121 aa		0.85	□□□□□ -2.27
RIC1	YLR039C	YDR278C	Q05612	105 aa		0.85	□□□□□ -2.27
RIC1	YLR039C	YPR153W	Q06537	140 aa		0.85	□□□□□ -2.27
RIC1	YLR039C	GPI11	Q06636	219 aa		0.85	□□□□□ -2.27
RIC1	YLR039C	VAM10	Q08474	114 aa		0.85	□□□□□ -2.27
RIC1	YLR039C	CCW12	Q12127	133 aa		0.85	□□□□□ -2.27
RIC1	YLR039C	YBR027C	P38220	110 aa		0.85	□□□□□ -2.27
RIC1	YLR039C	SPC1	P46965	94 aa		0.85	□□□□□ -2.27
RIC1	YLR039C	FIT3	Q08907	204 aa		0.85	□□□□□ -2.27
RIC1	YLR039C	TOR2	P32600	2474 aa	Known RBP	0.85	□□□□□ -2.27
RIC1	YLR039C	FYV5	P25585	152 aa		0.84	□□□□□ -2.27
RIC1	YLR039C	RPS20	P38701	121 aa	Known RBP	0.84	□□□□□ -2.27
RIC1	YLR039C	VPS55	P47111	140 aa		0.84	□□□□□ -2.27
RIC1	YLR039C	RTR2	Q12378	196 aa		0.84	□□□□□ -2.27
RIC1	YLR039C	YCR075W-A	Q3E830	75 aa		0.84	□□□□□ -2.27
RIC1	YLR039C	SNF11	P38956	169 aa		0.84	□□□□□ -2.28
RIC1	YLR039C	HHO1	P53551	258 aa		0.84	□□□□□ -2.28
RIC1	YLR039C	SDH7	Q04401	133 aa		0.84	□□□□□ -2.28
RIC1	YLR039C	YPR145C-A	Q2V2P0	78 aa		0.84	□□□□□ -2.28
RIC1	YLR039C	YPR108W-A	Q3E7B3	70 aa		0.84	□□□□□ -2.28
RIC1	YLR039C	ADK1	P07170	222 aa	Known RBP	0.84	□□□□□ -2.28
RIC1	YLR039C	BUD23	P25627	275 aa	Predicted RBP	0.84	□□□□□ -2.28
RIC1	YLR039C	HPM1	P40481	377 aa		0.84	□□□□□ -2.28
RIC1	YLR039C	CSN9	Q03981	162 aa		0.84	□□□□□ -2.28
RIC1	YLR039C	SOM1	Q05676	74 aa		0.84	□□□□□ -2.28
RIC1	YLR039C	RPS11A	P0CX47	156 aa	Known RBP	0.83	□□□□□ -2.28
RIC1	YLR039C	RPS11B	P0CX48	156 aa	Known RBP	0.83	□□□□□ -2.28
RIC1	YLR039C	RPL14A	P36105	138 aa	Known RBP	0.83	□□□□□ -2.28
RIC1	YLR039C	RPL14B	P38754	138 aa	Known RBP	0.83	□□□□□ -2.28
RIC1	YLR039C	PRE1	P22141	198 aa	Known RBP	0.83	□□□□□ -2.28
RIC1	YLR039C	MRP17	P28778	131 aa		0.83	□□□□□ -2.28
RIC1	YLR039C	UTP11	P34247	250 aa	Predicted RBP	0.83	□□□□□ -2.28
RIC1	YLR039C	POR2	P40478	281 aa		0.83	□□□□□ -2.28
RIC1	YLR039C	PHB1	P40961	287 aa		0.83	□□□□□ -2.28
RIC1	YLR039C	RPL37A	P49166	88 aa	Known RBP	0.83	□□□□□ -2.28
RIC1	YLR039C	YGR039W	P53225	103 aa		0.83	□□□□□ -2.28
RIC1	YLR039C	IRA2	P19158	3079 aa		0.83	□□□□□ -2.28
RIC1	YLR039C	BLM10	P43583	2143 aa		0.82	□□□□□ -2.28
RIC1	YLR039C	POL2	P21951	2222 aa	Known RBP	0.82	□□□□□ -2.28
RIC1	YLR039C	LHP1	P33399	275 aa	Known RBP	0.82	□□□□□ -2.28
RIC1	YLR039C	ATG8	P38182	117 aa	RIP-Chip data	0.82	□□□□□ -2.28	not detected
RIC1	YLR039C	ATP19	P81451	68 aa		0.82	□□□□□ -2.28
RIC1	YLR039C	SCP1	Q08873	200 aa		0.82	□□□□□ -2.28
RIC1	YLR039C	NHP6A	P11632	93 aa	Known RBP	0.82	□□□□□ -2.28
RIC1	YLR039C	IRA1	P18963	3092 aa		0.82	□□□□□ -2.28
RIC1	YLR039C	EMP24	P32803	203 aa	Known RBP	0.82	□□□□□ -2.28
RIC1	YLR039C	COX12	Q01519	83 aa		0.82	□□□□□ -2.28
RIC1	YLR039C	YLR361C-A	Q3E795	98 aa		0.82	□□□□□ -2.28
RIC1	YLR039C	YLR342W-A	Q3E810	57 aa		0.82	□□□□□ -2.28
RIC1	YLR039C	PAU24	P38155	120 aa		0.82	□□□□□ -2.28
RIC1	YLR039C	BRP1	P53194	125 aa		0.82	□□□□□ -2.28
RIC1	YLR039C	YMR105W-A	Q8TGS8	64 aa		0.82	□□□□□ -2.28
RIC1	YLR039C	CSF1	Q12150	2958 aa		0.81	□□□□□ -2.28
RIC1	YLR039C	HSP10	P38910	106 aa		0.81	□□□□□ -2.28
RIC1	YLR039C	DCV1	P43595	202 aa		0.81	□□□□□ -2.28
RIC1	YLR039C	SGF11	Q03067	99 aa		0.81	□□□□□ -2.28
RIC1	YLR039C	TMA23	Q03525	211 aa		0.81	□□□□□ -2.28
RIC1	YLR039C	HUT1	Q12520	339 aa		0.81	□□□□□ -2.28
RIC1	YLR039C	QCR9	P22289	66 aa		0.81	□□□□□ -2.28
RIC1	YLR039C	AUA1	P32450	94 aa		0.81	□□□□□ -2.28
RIC1	YLR039C	YBL071C	P38185	102 aa		0.81	□□□□□ -2.28
RIC1	YLR039C	YBR292C	P38357	123 aa		0.81	□□□□□ -2.28
RIC1	YLR039C	LCL2	Q08045	131 aa		0.81	□□□□□ -2.28
RIC1	YLR039C	YCR050C	P25630	102 aa		0.8	□□□□□ -2.28
RIC1	YLR039C	YAL064W	P39711	94 aa		0.8	□□□□□ -2.28
RIC1	YLR039C	CYB5	P40312	120 aa		0.8	□□□□□ -2.28
RIC1	YLR039C	SEN15	Q04675	128 aa		0.8	□□□□□ -2.28
RIC1	YLR039C	YCL048W-A	Q2V2Q2	79 aa		0.8	□□□□□ -2.28
RIC1	YLR039C	YAR064W	P39563	99 aa		0.8	□□□□□ -2.28
RIC1	YLR039C	YGR017W	P53210	297 aa		0.8	□□□□□ -2.28
RIC1	YLR039C	FRQ1	Q06389	190 aa		0.8	□□□□□ -2.28
RIC1	YLR039C	YHR213W-A	Q8TGT4	77 aa		0.8	□□□□□ -2.28
RIC1	YLR039C	RPS22A	P0C0W1	130 aa	Known RBP	0.8	□□□□□ -2.28
RIC1	YLR039C	YGL014C-A	P0C5N1	53 aa		0.8	□□□□□ -2.28
RIC1	YLR039C	SEC59	P20048	519 aa		0.8	□□□□□ -2.28
RIC1	YLR039C	SRL3	P36167	246 aa		0.8	□□□□□ -2.28
RIC1	YLR039C	COA4	Q05809	96 aa		0.8	□□□□□ -2.28
RIC1	YLR039C	RPL33A	P05744	107 aa	Known RBP	0.79	□□□□□ -2.28
RIC1	YLR039C	HYP2	P23301	157 aa	Known RBP	0.79	□□□□□ -2.28
RIC1	YLR039C	IMP2	P46972	177 aa		0.79	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms