RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W NSA2P40078 261 aaKnown RBP2.75□□□□□ -1.97
NUP85YJR042W YGR269WP40326 108 aa2.75□□□□□ -1.97
NUP85YJR042W UPS1Q05776 175 aa2.75□□□□□ -1.97
NUP85YJR042W YNR034W-AQ3E841 98 aa2.75□□□□□ -1.97
NUP85YJR042W ATG40Q99325 256 aa2.75□□□□□ -1.97
NUP85YJR042W FUN14P18411 198 aa2.74□□□□□ -1.97
NUP85YJR042W SEN15Q04675 128 aa2.74□□□□□ -1.97
NUP85YJR042W YNR064CP53750 290 aa2.74□□□□□ -1.97
NUP85YJR042W MIX14Q04341 121 aa2.74□□□□□ -1.97
NUP85YJR042W RIM9Q04734 239 aa2.74□□□□□ -1.97
NUP85YJR042W CYB5P40312 120 aa2.73□□□□□ -1.97
NUP85YJR042W YFR045WP43617 309 aa2.73□□□□□ -1.97
NUP85YJR042W YNR077CP53758 84 aa2.73□□□□□ -1.97
NUP85YJR042W YDL241WQ07738 123 aa2.73□□□□□ -1.97
NUP85YJR042W YOR192C-CQ3E736 78 aa2.73□□□□□ -1.97
NUP85YJR042W YIL134C-AQ45U18 67 aa2.73□□□□□ -1.97
NUP85YJR042W UBC5P15732 148 aa2.73□□□□□ -1.97
NUP85YJR042W MIG1P27705 504 aa2.73□□□□□ -1.97
NUP85YJR042W UTH1P36135 365 aa2.73□□□□□ -1.97
NUP85YJR042W PAM17P36147 197 aa2.73□□□□□ -1.97
NUP85YJR042W SFT2P38166 215 aa2.73□□□□□ -1.97
NUP85YJR042W YHR138CP38841 114 aaPredicted RBP2.73□□□□□ -1.97
NUP85YJR042W RCE1Q03530 315 aa2.73□□□□□ -1.97
NUP85YJR042W YOL118CQ08259 102 aa2.73□□□□□ -1.97
NUP85YJR042W YOR097CQ12274 175 aaPredicted RBP2.73□□□□□ -1.97
NUP85YJR042W YMR230W-AQ3E7B5 62 aa2.73□□□□□ -1.97
NUP85YJR042W RPS25BP0C0T4 108 aaKnown RBP2.72□□□□□ -1.97
NUP85YJR042W ROX3P25046 220 aa2.72□□□□□ -1.97
NUP85YJR042W MRPL11P36521 249 aaPredicted RBP2.72□□□□□ -1.97
NUP85YJR042W YBR090CP38253 122 aa2.72□□□□□ -1.97
NUP85YJR042W YNL217WP40152 326 aa2.72□□□□□ -1.97
NUP85YJR042W YJL027CP47063 138 aaPredicted RBP2.72□□□□□ -1.97
NUP85YJR042W DSK2P48510 373 aa2.72□□□□□ -1.97
NUP85YJR042W YMR007WQ03675 126 aa2.72□□□□□ -1.97
NUP85YJR042W YMR103CQ04436 120 aa2.72□□□□□ -1.97
NUP85YJR042W RPS25AQ3E792 108 aaPredicted RBP2.72□□□□□ -1.97
NUP85YJR042W YNL162W-AQ3E7A8 72 aa2.72□□□□□ -1.97
NUP85YJR042W SCS22Q6Q595 175 aa2.72□□□□□ -1.97
NUP85YJR042W HFA1P32874 2273 aa2.72□□□□□ -1.97
NUP85YJR042W RAD6P06104 172 aa2.72□□□□□ -1.97
NUP85YJR042W HYP2P23301 157 aaKnown RBP2.72□□□□□ -1.97
NUP85YJR042W FZF1P32805 299 aa2.72□□□□□ -1.97
NUP85YJR042W PIR5P46999 287 aa2.72□□□□□ -1.97
NUP85YJR042W YPL067CQ02754 198 aa2.72□□□□□ -1.97
NUP85YJR042W PPT2Q12036 173 aa2.72□□□□□ -1.97
NUP85YJR042W YGL258W-AQ3E740 77 aa2.72□□□□□ -1.97
NUP85YJR042W KTI11Q3E840 82 aa2.72□□□□□ -1.97
NUP85YJR042W YGL010WP25338 174 aa2.71□□□□□ -1.98
NUP85YJR042W FIT3Q08907 204 aa2.71□□□□□ -1.98
NUP85YJR042W RPS22BQ3E7Y3 130 aaKnown RBP2.71□□□□□ -1.98
NUP85YJR042W INO4P13902 151 aa2.7□□□□□ -1.98
NUP85YJR042W FPR2P32472 135 aa2.7□□□□□ -1.98
NUP85YJR042W MRPS8Q03799 155 aa2.7□□□□□ -1.98
NUP85YJR042W YOR105WQ08504 108 aa2.7□□□□□ -1.98
NUP85YJR042W POC4Q12245 148 aaPredicted RBP2.7□□□□□ -1.98
NUP85YJR042W MIC27P50945 234 aa2.7□□□□□ -1.98
NUP85YJR042W LIP1Q03579 150 aa2.7□□□□□ -1.98
NUP85YJR042W SHH3Q04487 196 aa2.7□□□□□ -1.98
NUP85YJR042W RAF1Q06891 181 aa2.7□□□□□ -1.98
NUP85YJR042W SEN1Q00416 2231 aaKnown RBP2.7□□□□□ -1.98
NUP85YJR042W HMRA1P0CY11 126 aa2.69□□□□□ -1.98
NUP85YJR042W YER084WP40057 128 aa2.69□□□□□ -1.98
NUP85YJR042W PAU16P35994 123 aa2.69□□□□□ -1.98
NUP85YJR042W YML122CQ03207 126 aa2.69□□□□□ -1.98
NUP85YJR042W IRC23Q08416 157 aa2.69□□□□□ -1.98
NUP85YJR042W YHR130CP38834 111 aa2.68□□□□□ -1.98
NUP85YJR042W YHR173CP38864 112 aa2.68□□□□□ -1.98
NUP85YJR042W SNF11P38956 169 aa2.68□□□□□ -1.98
NUP85YJR042W SNU13P39990 126 aaKnown RBP2.68□□□□□ -1.98
NUP85YJR042W SIP18P50263 79 aa2.68□□□□□ -1.98
NUP85YJR042W ATP19P81451 68 aa2.68□□□□□ -1.98
NUP85YJR042W YMR295CQ03559 197 aa2.68□□□□□ -1.98
NUP85YJR042W SOD1P00445 154 aaKnown RBP2.68□□□□□ -1.98
NUP85YJR042W YKL044WP36092 106 aa2.68□□□□□ -1.98
NUP85YJR042W YIL163CP40448 117 aa2.68□□□□□ -1.98
NUP85YJR042W YFR035CP43608 114 aa2.68□□□□□ -1.98
NUP85YJR042W PAU23Q07987 124 aa2.68□□□□□ -1.98
NUP85YJR042W PAU17Q12370 124 aa2.68□□□□□ -1.98
NUP85YJR042W HAP3P13434 144 aa2.67□□□□□ -1.98
NUP85YJR042W PRE1P22141 198 aaKnown RBP2.67□□□□□ -1.98
NUP85YJR042W KNH1P50112 268 aa2.66□□□□□ -1.98
NUP85YJR042W NAT5Q08689 176 aa2.66□□□□□ -1.98
NUP85YJR042W YIL059CP40520 121 aa2.66□□□□□ -1.98
NUP85YJR042W YHP1Q04116 353 aa2.66□□□□□ -1.98
NUP85YJR042W FIT2Q08906 153 aa2.66□□□□□ -1.98
NUP85YJR042W YDL157CQ12082 118 aa2.66□□□□□ -1.98
NUP85YJR042W YOS1Q3E834 85 aa2.66□□□□□ -1.98
NUP85YJR042W UTR5P32630 166 aa2.65□□□□□ -1.98
NUP85YJR042W FYV5P25585 152 aa2.65□□□□□ -1.99
NUP85YJR042W YPR117WQ06116 2489 aa2.64□□□□□ -1.99
NUP85YJR042W RPS23AP0CX29 145 aaKnown RBP2.64□□□□□ -1.99
NUP85YJR042W RPS23BP0CX30 145 aa2.64□□□□□ -1.99
NUP85YJR042W YBL071CP38185 102 aa2.64□□□□□ -1.99
NUP85YJR042W YDR114CQ04597 100 aa2.64□□□□□ -1.99
NUP85YJR042W SOM1Q05676 74 aa2.64□□□□□ -1.99
NUP85YJR042W MIC10Q96VH5 97 aa2.64□□□□□ -1.99
NUP85YJR042W TDA2P40045 126 aa2.64□□□□□ -1.99
NUP85YJR042W BRP1P53194 125 aa2.64□□□□□ -1.99
NUP85YJR042W FMP27Q06179 2628 aa2.63□□□□□ -1.99
NUP85YJR042W MRPL31P14063 131 aaPredicted RBP2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 60.7 ms