RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	GCV3	P39726	170 aa	Predicted RBP	2.28	□□□□□ -2.04
VMA22	YHR060W	MGR2	Q02889	113 aa		2.28	□□□□□ -2.04
VMA22	YHR060W	YCR095W-A	Q3E787	52 aa		2.28	□□□□□ -2.04
VMA22	YHR060W	YMR082C	Q04276	118 aa		2.27	□□□□□ -2.05
VMA22	YHR060W	PDR10	P51533	1564 aa		2.27	□□□□□ -2.05
VMA22	YHR060W	ROX3	P25046	220 aa		2.26	□□□□□ -2.05
VMA22	YHR060W	RSM18	P40033	138 aa		2.26	□□□□□ -2.05
VMA22	YHR060W	SNA2	P56508	79 aa		2.26	□□□□□ -2.05
VMA22	YHR060W	SCP1	Q08873	200 aa		2.26	□□□□□ -2.05
VMA22	YHR060W	CCW14	O13547	238 aa		2.25	□□□□□ -2.05
VMA22	YHR060W	YOL013W-A	P0C272	63 aa	Predicted RBP	2.25	□□□□□ -2.05
VMA22	YHR060W	PAU5	P43575	122 aa		2.25	□□□□□ -2.05
VMA22	YHR060W	IMP2	P46972	177 aa		2.25	□□□□□ -2.05
VMA22	YHR060W	YDR042C	Q03205	200 aa		2.25	□□□□□ -2.05
VMA22	YHR060W	MVB12	P42939	101 aa		2.24	□□□□□ -2.05
VMA22	YHR060W	RRT15	Q3E811	62 aa		2.23	□□□□□ -2.05
VMA22	YHR060W	COX12	Q01519	83 aa		2.22	□□□□□ -2.05
VMA22	YHR060W	LCL2	Q08045	131 aa		2.22	□□□□□ -2.05
VMA22	YHR060W	YPL038W-A	Q3E7B4	63 aa		2.22	□□□□□ -2.05
VMA22	YHR060W	MHF2	Q3E829	80 aa		2.22	□□□□□ -2.05
VMA22	YHR060W	HUG1	Q6Q5K6	68 aa		2.21	□□□□□ -2.06
VMA22	YHR060W	MRP17	P28778	131 aa		2.2	□□□□□ -2.06
VMA22	YHR060W	BPT1	P14772	1559 aa		2.19	□□□□□ -2.06
VMA22	YHR060W	SRB8	P25648	1427 aa		2.19	□□□□□ -2.06
VMA22	YHR060W	SWR1	Q05471	1514 aa		2.19	□□□□□ -2.06
VMA22	YHR060W	MRPS12	P53732	153 aa		2.19	□□□□□ -2.06
VMA22	YHR060W	YRF1-3	P0CX14	1859 aa		2.19	□□□□□ -2.06
VMA22	YHR060W	YRF1-7	P0CX15	1859 aa		2.19	□□□□□ -2.06
VMA22	YHR060W	YRF1-6	P53819	1859 aa		2.19	□□□□□ -2.06
VMA22	YHR060W	ICY1	Q04329	127 aa		2.18	□□□□□ -2.06
VMA22	YHR060W	YKL068W-A	Q3E826	78 aa		2.18	□□□□□ -2.06
VMA22	YHR060W	YHR213W-B	Q8TGK1	99 aa		2.18	□□□□□ -2.06
VMA22	YHR060W	CYR1	P08678	2026 aa	Known RBP	2.18	□□□□□ -2.06
VMA22	YHR060W	CDC39	P25655	2108 aa	Known RBP	2.17	□□□□□ -2.06
VMA22	YHR060W	UBR2	Q07963	1872 aa		2.16	□□□□□ -2.06
VMA22	YHR060W	RPA190	P10964	1664 aa	Known RBP	2.16	□□□□□ -2.06
VMA22	YHR060W	HUA1	P40325	198 aa		2.16	□□□□□ -2.06
VMA22	YHR060W	AIM19	P40502	157 aa		2.15	□□□□□ -2.07
VMA22	YHR060W	GSC2	P40989	1895 aa		2.15	□□□□□ -2.07
VMA22	YHR060W	GDB1	Q06625	1536 aa		2.15	□□□□□ -2.07
VMA22	YHR060W	PAU6	P0CE90	120 aa		2.14	□□□□□ -2.07
VMA22	YHR060W	PAU18	P0CE91	120 aa		2.14	□□□□□ -2.07
VMA22	YHR060W	YBL071C	P38185	102 aa		2.14	□□□□□ -2.07
VMA22	YHR060W	HHY1	P39982	102 aa		2.14	□□□□□ -2.07
VMA22	YHR060W	YDR210W	Q03482	75 aa		2.14	□□□□□ -2.07
VMA22	YHR060W	YSP2	Q06681	1438 aa		2.14	□□□□□ -2.07
VMA22	YHR060W	TY4B-J	P47024	1803 aa		2.14	□□□□□ -2.07
VMA22	YHR060W	MRPL38	P35996	138 aa	Predicted RBP	2.13	□□□□□ -2.07
VMA22	YHR060W	SPC1	P46965	94 aa		2.13	□□□□□ -2.07
VMA22	YHR060W	YJR128W	P47162	119 aa		2.13	□□□□□ -2.07
VMA22	YHR060W	MRX7	P53869	86 aa		2.13	□□□□□ -2.07
VMA22	YHR060W	COX19	Q3E731	98 aa		2.13	□□□□□ -2.07
VMA22	YHR060W	ESC1	Q03661	1658 aa	Known RBP	2.12	□□□□□ -2.07
VMA22	YHR060W	ACC1	Q00955	2233 aa	Known RBP	2.12	□□□□□ -2.07
VMA22	YHR060W	YIL086C	P40503	102 aa		2.12	□□□□□ -2.07
VMA22	YHR060W	LCL1	Q02786	101 aa		2.12	□□□□□ -2.07
VMA22	YHR060W	PAU1	P0CE88	120 aa		2.11	□□□□□ -2.07
VMA22	YHR060W	PAU14	P0CE89	120 aa		2.11	□□□□□ -2.07
VMA22	YHR060W	PAU8	P0CE92	120 aa		2.11	□□□□□ -2.07
VMA22	YHR060W	PAU11	P0CE93	120 aa		2.11	□□□□□ -2.07
VMA22	YHR060W	PAU13	P38725	120 aa		2.11	□□□□□ -2.07
VMA22	YHR060W	YMR141C	P40211	102 aa		2.11	□□□□□ -2.07
VMA22	YHR060W	PAU4	P53427	120 aa		2.11	□□□□□ -2.07
VMA22	YHR060W	PAU10	Q03050	120 aa		2.11	□□□□□ -2.07
VMA22	YHR060W	YMR175W-A	Q3E766	64 aa		2.11	□□□□□ -2.07
VMA22	YHR060W	PAU9	Q3E770	120 aa		2.11	□□□□□ -2.07
VMA22	YHR060W	YCR085W	P25650	117 aa		2.1	□□□□□ -2.07
VMA22	YHR060W	RPA12	P32529	125 aa	Known RBP	2.1	□□□□□ -2.07
VMA22	YHR060W	YBR292C	P38357	123 aa		2.1	□□□□□ -2.07
VMA22	YHR060W	CWP2	P43497	92 aa		2.1	□□□□□ -2.07
VMA22	YHR060W	PAU20	Q08322	120 aa		2.1	□□□□□ -2.07
VMA22	YHR060W	YLR255C	O13574	117 aa		2.09	□□□□□ -2.07
VMA22	YHR060W	NHP2	P32495	156 aa	Predicted RBP	2.09	□□□□□ -2.07
VMA22	YHR060W	SHU1	P38751	150 aa		2.09	□□□□□ -2.07
VMA22	YHR060W	MPC2	P38857	129 aa		2.08	□□□□□ -2.08
VMA22	YHR060W	YNR034W-A	Q3E841	98 aa		2.08	□□□□□ -2.08
VMA22	YHR060W	BNI1	P41832	1953 aa		2.08	□□□□□ -2.08
VMA22	YHR060W	BSC4	P53841	131 aa		2.07	□□□□□ -2.08
VMA22	YHR060W	YOR343C	Q12484	108 aa		2.06	□□□□□ -2.08
VMA22	YHR060W	POL1	P13382	1468 aa		2.06	□□□□□ -2.08
VMA22	YHR060W	NTE1	Q04958	1679 aa		2.06	□□□□□ -2.08
VMA22	YHR060W	RPS11A	P0CX47	156 aa	Known RBP	2.05	□□□□□ -2.08
VMA22	YHR060W	RPS11B	P0CX48	156 aa	Known RBP	2.05	□□□□□ -2.08
VMA22	YHR060W	TOM6	P33448	61 aa		2.05	□□□□□ -2.08
VMA22	YHR060W	PDX3	P38075	228 aa	Known RBP	2.02	□□□□□ -2.09
VMA22	YHR060W	POC4	Q12245	148 aa	Predicted RBP	2.02	□□□□□ -2.09
VMA22	YHR060W	RPL37A	P49166	88 aa	Known RBP	2.01	□□□□□ -2.09
VMA22	YHR060W	YOR034C-A	Q3E735	80 aa		2.01	□□□□□ -2.09
VMA22	YHR060W	ESP1	Q03018	1630 aa		1.99	□□□□□ -2.09
VMA22	YHR060W	YBR072C-A	Q3E794	53 aa		1.99	□□□□□ -2.09
VMA22	YHR060W	YHR214C-D	P0CX93	97 aa		1.98	□□□□□ -2.09
VMA22	YHR060W	YKL065W-A	Q2V2P2	73 aa		1.98	□□□□□ -2.09
VMA22	YHR060W	YHR213W-A	Q8TGT4	77 aa		1.97	□□□□□ -2.09
VMA22	YHR060W	MMS22	Q06164	1454 aa		1.96	□□□□□ -2.1
VMA22	YHR060W	FPR2	P32472	135 aa		1.96	□□□□□ -2.1
VMA22	YHR060W	YHR173C	P38864	112 aa		1.96	□□□□□ -2.1
VMA22	YHR060W	YOR105W	Q08504	108 aa		1.96	□□□□□ -2.1
VMA22	YHR060W	YDR381C-A	Q3E6R5	114 aa		1.96	□□□□□ -2.1
VMA22	YHR060W	RPL43A	P0CX25	92 aa	Known RBP	1.95	□□□□□ -2.1
VMA22	YHR060W	RPL43B	P0CX26	92 aa		1.95	□□□□□ -2.1

Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms