RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A YPR203WQ08994 102 aa1.77□□□□□ -2.13
EFG1YGR271C-A YCR095W-AQ3E787 52 aa1.77□□□□□ -2.13
EFG1YGR271C-A MHF2Q3E829 80 aa1.77□□□□□ -2.13
EFG1YGR271C-A BNI1P41832 1953 aa1.77□□□□□ -2.13
EFG1YGR271C-A GSC2P40989 1895 aa1.77□□□□□ -2.13
EFG1YGR271C-A YCR085WP25650 117 aa1.76□□□□□ -2.13
EFG1YGR271C-A SNA2P56508 79 aa1.76□□□□□ -2.13
EFG1YGR271C-A YOL118CQ08259 102 aa1.76□□□□□ -2.13
EFG1YGR271C-A YGL041C-BQ3E750 60 aa1.76□□□□□ -2.13
EFG1YGR271C-A GDB1Q06625 1536 aa1.76□□□□□ -2.13
EFG1YGR271C-A YPK9Q12697 1472 aa1.75□□□□□ -2.13
EFG1YGR271C-A VPS55P47111 140 aa1.75□□□□□ -2.13
EFG1YGR271C-A CCW12Q12127 133 aa1.75□□□□□ -2.13
EFG1YGR271C-A YMR175W-AQ3E766 64 aa1.75□□□□□ -2.13
EFG1YGR271C-A RPA12P32529 125 aaKnown RBP1.74□□□□□ -2.13
EFG1YGR271C-A YHL037CP38733 133 aa1.74□□□□□ -2.13
EFG1YGR271C-A ICS3P47034 131 aa1.74□□□□□ -2.13
EFG1YGR271C-A LSM2P38203 95 aaKnown RBP1.73□□□□□ -2.13
EFG1YGR271C-A YJL009WP47078 108 aa1.73□□□□□ -2.13
EFG1YGR271C-A MIC27P50945 234 aa1.73□□□□□ -2.13
EFG1YGR271C-A POC4Q12245 148 aaPredicted RBP1.73□□□□□ -2.13
EFG1YGR271C-A RPS22BQ3E7Y3 130 aaKnown RBP1.73□□□□□ -2.13
EFG1YGR271C-A BPT1P14772 1559 aa1.72□□□□□ -2.13
EFG1YGR271C-A TY1B-PR2P0C2J0 1756 aa1.72□□□□□ -2.13
EFG1YGR271C-A CCW14O13547 238 aa1.72□□□□□ -2.13
EFG1YGR271C-A YBR013CP38215 129 aa1.72□□□□□ -2.13
EFG1YGR271C-A YHR213W-AQ8TGT4 77 aa1.72□□□□□ -2.13
EFG1YGR271C-A YHR212W-AP0CX91 67 aa1.71□□□□□ -2.14
EFG1YGR271C-A MRP17P28778 131 aa1.71□□□□□ -2.14
EFG1YGR271C-A NHP2P32495 156 aaPredicted RBP1.71□□□□□ -2.14
EFG1YGR271C-A YBL071CP38185 102 aa1.71□□□□□ -2.14
EFG1YGR271C-A SPC1P46965 94 aa1.71□□□□□ -2.14
EFG1YGR271C-A YNL122CP53921 115 aaPredicted RBP1.71□□□□□ -2.14
EFG1YGR271C-A LCL2Q08045 131 aa1.71□□□□□ -2.14
EFG1YGR271C-A YGR240C-AQ3E786 66 aa1.71□□□□□ -2.14
EFG1YGR271C-A PAU6P0CE90 120 aa1.7□□□□□ -2.14
EFG1YGR271C-A PAU18P0CE91 120 aa1.7□□□□□ -2.14
EFG1YGR271C-A TOM6P33448 61 aa1.7□□□□□ -2.14
EFG1YGR271C-A MRPL38P35996 138 aaPredicted RBP1.7□□□□□ -2.14
EFG1YGR271C-A YPL038W-AQ3E7B4 63 aa1.7□□□□□ -2.14
EFG1YGR271C-A POL1P13382 1468 aa1.69□□□□□ -2.14
EFG1YGR271C-A SRB8P25648 1427 aa1.69□□□□□ -2.14
EFG1YGR271C-A AQY2P0CD90 149 aa1.69□□□□□ -2.14
EFG1YGR271C-A MRPS12P53732 153 aa1.69□□□□□ -2.14
EFG1YGR271C-A YOR072WQ08486 104 aa1.69□□□□□ -2.14
EFG1YGR271C-A ESP1Q03018 1630 aa1.69□□□□□ -2.14
EFG1YGR271C-A YRF1-2P40105 1681 aa1.68□□□□□ -2.14
EFG1YGR271C-A MRPL31P14063 131 aaPredicted RBP1.68□□□□□ -2.14
EFG1YGR271C-A COX12Q01519 83 aa1.68□□□□□ -2.14
EFG1YGR271C-A YOR343CQ12484 108 aa1.68□□□□□ -2.14
EFG1YGR271C-A UBR2Q07963 1872 aa1.68□□□□□ -2.14
EFG1YGR271C-A TY1B-NL2Q99337 1749 aaKnown RBP1.67□□□□□ -2.14
EFG1YGR271C-A YAR064WP39563 99 aa1.67□□□□□ -2.14
EFG1YGR271C-A MRX7P53869 86 aa1.67□□□□□ -2.14
EFG1YGR271C-A YDR210WQ03482 75 aa1.67□□□□□ -2.14
EFG1YGR271C-A NUP159P40477 1460 aa1.67□□□□□ -2.14
EFG1YGR271C-A PAI3P01094 68 aa1.66□□□□□ -2.14
EFG1YGR271C-A PAU1P0CE88 120 aa1.66□□□□□ -2.14
EFG1YGR271C-A PAU14P0CE89 120 aa1.66□□□□□ -2.14
EFG1YGR271C-A PAU8P0CE92 120 aa1.66□□□□□ -2.14
EFG1YGR271C-A PAU11P0CE93 120 aa1.66□□□□□ -2.14
EFG1YGR271C-A YCR001WP25347 104 aa1.66□□□□□ -2.14
EFG1YGR271C-A PAU13P38725 120 aa1.66□□□□□ -2.14
EFG1YGR271C-A AIM19P40502 157 aa1.66□□□□□ -2.14
EFG1YGR271C-A PAU10Q03050 120 aa1.66□□□□□ -2.14
EFG1YGR271C-A YDR381C-AQ3E6R5 114 aa1.66□□□□□ -2.14
EFG1YGR271C-A PAU9Q3E770 120 aa1.66□□□□□ -2.14
EFG1YGR271C-A TY1B-BRQ12193 1756 aa1.66□□□□□ -2.14
EFG1YGR271C-A CDC39P25655 2108 aaKnown RBP1.66□□□□□ -2.14
EFG1YGR271C-A MYO1P08964 1928 aa1.66□□□□□ -2.14
EFG1YGR271C-A MMS22Q06164 1454 aa1.65□□□□□ -2.15
EFG1YGR271C-A YHR214C-DP0CX93 97 aa1.65□□□□□ -2.15
EFG1YGR271C-A PAU4P53427 120 aa1.65□□□□□ -2.15
EFG1YGR271C-A YPR145C-AQ2V2P0 78 aa1.65□□□□□ -2.15
EFG1YGR271C-A YNR034W-AQ3E841 98 aa1.65□□□□□ -2.15
EFG1YGR271C-A YOL013W-AP0C272 63 aaPredicted RBP1.64□□□□□ -2.15
EFG1YGR271C-A BSC4P53841 131 aa1.64□□□□□ -2.15
EFG1YGR271C-A MGR2Q02889 113 aa1.64□□□□□ -2.15
EFG1YGR271C-A PAU20Q08322 120 aa1.64□□□□□ -2.15
EFG1YGR271C-A YDR119W-AQ2V2P9 66 aa1.64□□□□□ -2.15
EFG1YGR271C-A TY4B-JP47024 1803 aa1.63□□□□□ -2.15
EFG1YGR271C-A MVB12P42939 101 aa1.63□□□□□ -2.15
EFG1YGR271C-A NTE1Q04958 1679 aa1.62□□□□□ -2.15
EFG1YGR271C-A RPS11AP0CX47 156 aaKnown RBP1.62□□□□□ -2.15
EFG1YGR271C-A RPS11BP0CX48 156 aaKnown RBP1.62□□□□□ -2.15
EFG1YGR271C-A MPC2P38857 129 aa1.62□□□□□ -2.15
EFG1YGR271C-A YIL102CP40488 101 aa1.62□□□□□ -2.15
EFG1YGR271C-A LCL1Q02786 101 aa1.62□□□□□ -2.15
EFG1YGR271C-A HUG1Q6Q5K6 68 aa1.62□□□□□ -2.15
EFG1YGR271C-A ACC1Q00955 2233 aaKnown RBP1.61□□□□□ -2.15
EFG1YGR271C-A YLR255CO13574 117 aa1.61□□□□□ -2.15
EFG1YGR271C-A YOR105WQ08504 108 aa1.61□□□□□ -2.15
EFG1YGR271C-A SEC7P11075 2009 aaKnown RBP1.61□□□□□ -2.15
EFG1YGR271C-A SIN3P22579 1536 aa1.61□□□□□ -2.15
EFG1YGR271C-A YBR292CP38357 123 aa1.6□□□□□ -2.15
EFG1YGR271C-A ATX1P38636 73 aa1.6□□□□□ -2.15
EFG1YGR271C-A YIL086CP40503 102 aa1.6□□□□□ -2.15
EFG1YGR271C-A YOR314WQ12506 109 aa1.6□□□□□ -2.15
EFG1YGR271C-A YKL065W-AQ2V2P2 73 aa1.6□□□□□ -2.15
EFG1YGR271C-A YER188C-AP0C0V2 99 aa1.59□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms