RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeastyeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDR1YGR100W PBA1Q05778 276 aa3.65□□□□□ -1.83
MDR1YGR100W RPS8AP0CX39 200 aaKnown RBP3.65□□□□□ -1.83
MDR1YGR100W RPS8BP0CX40 200 aaKnown RBP3.65□□□□□ -1.83
MDR1YGR100W RPL16BP26785 198 aaKnown RBP3.65□□□□□ -1.83
MDR1YGR100W YGR164WP53291 111 aa3.65□□□□□ -1.83
MDR1YGR100W RSM19P53733 91 aaPredicted RBP3.65□□□□□ -1.83
MDR1YGR100W HAL1Q01766 294 aa3.65□□□□□ -1.83
MDR1YGR100W PRM7Q12459 698 aa3.65□□□□□ -1.83
MDR1YGR100W GAT4P40569 121 aa3.64□□□□□ -1.83
MDR1YGR100W KEG1P43614 200 aa3.64□□□□□ -1.83
MDR1YGR100W IRC19Q07843 230 aa3.64□□□□□ -1.83
MDR1YGR100W NCE102Q12207 173 aaRIP-Chip data3.64□□□□□ -1.83not detected
MDR1YGR100W TDA8Q6B2U8 126 aa3.64□□□□□ -1.83
MDR1YGR100W ACC1Q00955 2233 aaKnown RBP3.64□□□□□ -1.83
MDR1YGR100W TOM1Q03280 3268 aa3.64□□□□□ -1.83
MDR1YGR100W SIM1P40472 476 aa3.64□□□□□ -1.83
MDR1YGR100W AIM19P40502 157 aa3.64□□□□□ -1.83
MDR1YGR100W YNL046WP53956 172 aa3.64□□□□□ -1.83
MDR1YGR100W YHR214C-EQ8TGK0 99 aa3.64□□□□□ -1.83
MDR1YGR100W BPH1P25356 2167 aa3.63□□□□□ -1.83
MDR1YGR100W RPL28P02406 149 aaKnown RBP3.63□□□□□ -1.83
MDR1YGR100W YNL190WP53872 204 aa3.63□□□□□ -1.83
MDR1YGR100W ICY1Q04329 127 aa3.63□□□□□ -1.83
MDR1YGR100W YBR126W-AQ8TGU7 68 aa3.63□□□□□ -1.83
MDR1YGR100W RPL16AP26784 199 aaKnown RBP3.62□□□□□ -1.83
MDR1YGR100W YSY6P38374 65 aa3.62□□□□□ -1.83
MDR1YGR100W PIR5P46999 287 aa3.62□□□□□ -1.83
MDR1YGR100W YNL234WP53857 426 aa3.62□□□□□ -1.83
MDR1YGR100W SPO24Q3E752 67 aa3.62□□□□□ -1.83
MDR1YGR100W YHR213WP0CI67 198 aa3.62□□□□□ -1.83
MDR1YGR100W AGA1P32323 725 aa3.62□□□□□ -1.83
MDR1YGR100W TOS8P53147 276 aa3.62□□□□□ -1.83
MDR1YGR100W SMD1Q02260 146 aaPredicted RBP3.62□□□□□ -1.83
MDR1YGR100W YMR181CQ03231 154 aa3.62□□□□□ -1.83
MDR1YGR100W COA3Q3E7B2 85 aa3.62□□□□□ -1.83
MDR1YGR100W PFY1P07274 126 aa3.61□□□□□ -1.83
MDR1YGR100W HSP150P32478 413 aa3.61□□□□□ -1.83
MDR1YGR100W YAL064W-BO13512 126 aa3.61□□□□□ -1.83
MDR1YGR100W YGL258W-AQ3E740 77 aa3.61□□□□□ -1.83
MDR1YGR100W SPT4P32914 102 aaPredicted RBP3.61□□□□□ -1.83
MDR1YGR100W RPS14BP39516 138 aaKnown RBP3.61□□□□□ -1.83
MDR1YGR100W MGR2Q02889 113 aa3.61□□□□□ -1.83
MDR1YGR100W YLR194CQ05777 254 aa3.61□□□□□ -1.83
MDR1YGR100W YDR246W-AQ3E763 66 aa3.61□□□□□ -1.83
MDR1YGR100W ARF1P11076 181 aaKnown RBP3.6□□□□□ -1.83
MDR1YGR100W EDC1P53080 175 aaPredicted RBP3.6□□□□□ -1.83
MDR1YGR100W YML122CQ03207 126 aa3.6□□□□□ -1.83
MDR1YGR100W YMR254CQ04838 102 aa3.6□□□□□ -1.83
MDR1YGR100W SHH4Q06236 168 aa3.6□□□□□ -1.83
MDR1YGR100W VPS68Q12016 184 aa3.6□□□□□ -1.83
MDR1YGR100W MTC6P38849 526 aa3.6□□□□□ -1.83
MDR1YGR100W ICS3P47034 131 aa3.6□□□□□ -1.83
MDR1YGR100W ERI1P62651 68 aaKnown RBP3.6□□□□□ -1.83
MDR1YGR100W BRR2P32639 2163 aaKnown RBP3.59□□□□□ -1.83
MDR1YGR100W GLO1P50107 326 aa3.59□□□□□ -1.83
MDR1YGR100W PBP4Q07362 185 aaKnown RBP3.59□□□□□ -1.83
MDR1YGR100W POL2P21951 2222 aaKnown RBP3.59□□□□□ -1.84
MDR1YGR100W YLR285C-AQ3E771 56 aa3.59□□□□□ -1.84
MDR1YGR100W SPS100P13130 326 aa3.58□□□□□ -1.84
MDR1YGR100W YSF3P0C074 85 aaPredicted RBP3.58□□□□□ -1.84
MDR1YGR100W ATP15P21306 62 aa3.58□□□□□ -1.84
MDR1YGR100W FAS1P07149 2051 aaKnown RBP3.58□□□□□ -1.84
MDR1YGR100W YCR022CP25620 114 aa3.57□□□□□ -1.84
MDR1YGR100W TRS23Q03784 219 aa3.57□□□□□ -1.84
MDR1YGR100W YDR274CP87283 123 aa3.57□□□□□ -1.84
MDR1YGR100W YMR295CQ03559 197 aa3.57□□□□□ -1.84
MDR1YGR100W PPT2Q12036 173 aa3.57□□□□□ -1.84
MDR1YGR100W YIL029CP40538 142 aa3.57□□□□□ -1.84
MDR1YGR100W PCP1P53259 346 aa3.57□□□□□ -1.84
MDR1YGR100W LDB16P25587 256 aa3.56□□□□□ -1.84
MDR1YGR100W MPC2P38857 129 aa3.56□□□□□ -1.84
MDR1YGR100W YGR018CP53211 109 aa3.56□□□□□ -1.84
MDR1YGR100W YDR114CQ04597 100 aa3.56□□□□□ -1.84
MDR1YGR100W YOR381W-AQ3E804 55 aa3.56□□□□□ -1.84
MDR1YGR100W YLR156WP0CE96 114 aa3.56□□□□□ -1.84
MDR1YGR100W YLR159WP0CE97 114 aa3.56□□□□□ -1.84
MDR1YGR100W YLR161WP0CE98 114 aa3.56□□□□□ -1.84
MDR1YGR100W AIM4P38305 123 aaPredicted RBP3.56□□□□□ -1.84
MDR1YGR100W YHR214C-DP0CX93 97 aa3.55□□□□□ -1.84
MDR1YGR100W RPS27AP35997 82 aaKnown RBP3.55□□□□□ -1.84
MDR1YGR100W RPS27BP38711 82 aa3.55□□□□□ -1.84
MDR1YGR100W TOS6P48560 102 aa3.55□□□□□ -1.84
MDR1YGR100W YOR034C-AQ3E735 80 aa3.55□□□□□ -1.84
MDR1YGR100W PGU1P47180 361 aa3.55□□□□□ -1.84
MDR1YGR100W RPB9P27999 122 aa3.54□□□□□ -1.84
MDR1YGR100W YFR035CP43608 114 aa3.54□□□□□ -1.84
MDR1YGR100W HUR1P45820 110 aa3.54□□□□□ -1.84
MDR1YGR100W RPL26AP05743 127 aaKnown RBP3.54□□□□□ -1.84
MDR1YGR100W YBL071CP38185 102 aa3.54□□□□□ -1.84
MDR1YGR100W MRPS12P53732 153 aa3.54□□□□□ -1.84
MDR1YGR100W RPL15AP05748 204 aaKnown RBP3.53□□□□□ -1.84
MDR1YGR100W YKR045CP36138 183 aa3.53□□□□□ -1.84
MDR1YGR100W KRE9P39005 276 aa3.53□□□□□ -1.84
MDR1YGR100W SPI1P40092 148 aa3.53□□□□□ -1.84
MDR1YGR100W PEX17P40155 199 aa3.53□□□□□ -1.84
MDR1YGR100W DCV1P43595 202 aa3.53□□□□□ -1.84
MDR1YGR100W YAL064WP39711 94 aa3.53□□□□□ -1.84
MDR1YGR100W ATP20Q12233 115 aa3.53□□□□□ -1.84
MDR1YGR100W AIR2Q12476 344 aaKnown RBP3.53□□□□□ -1.84
MDR1YGR100W MDM35O60200 86 aa3.53□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms