RNA–Protein interactions for RNA: YGL066W

SGF73, Transcript of SAGA complex subunit, yeast

Gene SGF73, Length 1,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGF73	YGL066W	YIP3	P53633	176 aa		5.87	□□□□□ -1.47
SGF73	YGL066W	YPL229W	Q99395	206 aa		5.87	□□□□□ -1.47
SGF73	YGL066W	RRG8	Q06109	277 aa		5.87	□□□□□ -1.47
SGF73	YGL066W	MRPL23	Q12487	163 aa	Predicted RBP	5.87	□□□□□ -1.47
SGF73	YGL066W	YPR053C	Q6Q5F3	151 aa		5.87	□□□□□ -1.47
SGF73	YGL066W	DSE2	P38844	325 aa		5.86	□□□□□ -1.47
SGF73	YGL066W	DCV1	P43595	202 aa		5.86	□□□□□ -1.47
SGF73	YGL066W	FIP1	P45976	327 aa		5.86	□□□□□ -1.47
SGF73	YGL066W	RPL28	P02406	149 aa	Known RBP	5.86	□□□□□ -1.47
SGF73	YGL066W	COX17	Q12287	69 aa		5.86	□□□□□ -1.47
SGF73	YGL066W	KEG1	P43614	200 aa		5.85	□□□□□ -1.47
SGF73	YGL066W	YNL190W	P53872	204 aa		5.85	□□□□□ -1.47
SGF73	YGL066W	YPL080C	Q02826	108 aa		5.85	□□□□□ -1.47
SGF73	YGL066W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.85	□□□□□ -1.47	not detected
SGF73	YGL066W	YHR022C	P38763	256 aa		5.84	□□□□□ -1.47
SGF73	YGL066W	ABF2	Q02486	183 aa		5.84	□□□□□ -1.47
SGF73	YGL066W	YBR200W-A	Q3E755	54 aa		5.84	□□□□□ -1.47
SGF73	YGL066W	YAL063C-A	Q3E791	96 aa		5.84	□□□□□ -1.47
SGF73	YGL066W	RPL18A	P0CX49	186 aa	Known RBP	5.84	□□□□□ -1.48
SGF73	YGL066W	RPL18B	P0CX50	186 aa	Known RBP	5.84	□□□□□ -1.48
SGF73	YGL066W	BNA1	P47096	177 aa		5.84	□□□□□ -1.48
SGF73	YGL066W	YJR146W	P47174	117 aa		5.84	□□□□□ -1.48
SGF73	YGL066W	CCW14	O13547	238 aa		5.83	□□□□□ -1.48
SGF73	YGL066W	RPL16A	P26784	199 aa	Known RBP	5.83	□□□□□ -1.48
SGF73	YGL066W	UGX2	P32772	223 aa		5.83	□□□□□ -1.48
SGF73	YGL066W	TOA2	P32774	122 aa		5.83	□□□□□ -1.48
SGF73	YGL066W	YIA6	P40556	373 aa		5.83	□□□□□ -1.48
SGF73	YGL066W	MRPS12	P53732	153 aa		5.83	□□□□□ -1.48
SGF73	YGL066W	KRE1	P17260	313 aa		5.82	□□□□□ -1.48
SGF73	YGL066W	MIC12	P38341	106 aa		5.82	□□□□□ -1.48
SGF73	YGL066W	YML122C	Q03207	126 aa		5.82	□□□□□ -1.48
SGF73	YGL066W	NRG2	P38082	220 aa		5.81	□□□□□ -1.48
SGF73	YGL066W	NCE103	P53615	221 aa		5.81	□□□□□ -1.48
SGF73	YGL066W	YGL260W	P53056	76 aa		5.8	□□□□□ -1.48
SGF73	YGL066W	YMR317W	Q04893	1140 aa		5.8	□□□□□ -1.48
SGF73	YGL066W	CCW12	Q12127	133 aa		5.8	□□□□□ -1.48
SGF73	YGL066W	YCR085W	P25650	117 aa		5.8	□□□□□ -1.48
SGF73	YGL066W	PEX17	P40155	199 aa		5.8	□□□□□ -1.48
SGF73	YGL066W	YBL112C	Q3E7Y4	105 aa		5.8	□□□□□ -1.48
SGF73	YGL066W	YOR011W-A	Q3E807	68 aa		5.8	□□□□□ -1.48
SGF73	YGL066W	YFL041W-A	Q3E817	63 aa		5.8	□□□□□ -1.48
SGF73	YGL066W	RPL16B	P26785	198 aa	Known RBP	5.79	□□□□□ -1.48
SGF73	YGL066W	YPR013C	Q12145	317 aa		5.79	□□□□□ -1.48
SGF73	YGL066W	Q0255	P03881	472 aa		5.78	□□□□□ -1.48
SGF73	YGL066W	SKI6	P46948	246 aa	Predicted RBP	5.78	□□□□□ -1.48
SGF73	YGL066W	SBH2	P52871	88 aa		5.78	□□□□□ -1.48
SGF73	YGL066W	SPS100	P13130	326 aa		5.78	□□□□□ -1.48
SGF73	YGL066W	VPS55	P47111	140 aa		5.78	□□□□□ -1.48
SGF73	YGL066W	YLR042C	Q07990	161 aa		5.78	□□□□□ -1.48
SGF73	YGL066W	TOR2	P32600	2474 aa	Known RBP	5.77	□□□□□ -1.49
SGF73	YGL066W	GCN1	P33892	2672 aa	Known RBP	5.77	□□□□□ -1.49
SGF73	YGL066W	RPL15A	P05748	204 aa	Known RBP	5.76	□□□□□ -1.49
SGF73	YGL066W	YBR209W	P38311	105 aa		5.76	□□□□□ -1.49
SGF73	YGL066W	SHU1	P38751	150 aa		5.76	□□□□□ -1.49
SGF73	YGL066W	YGL088W	P53151	121 aa		5.76	□□□□□ -1.49
SGF73	YGL066W	TRP1	P00912	224 aa		5.76	□□□□□ -1.49
SGF73	YGL066W	YER135C	P40082	130 aa		5.76	□□□□□ -1.49
SGF73	YGL066W	YNL146C-A	Q3E7Z1	64 aa		5.76	□□□□□ -1.49
SGF73	YGL066W	AIM19	P40502	157 aa		5.75	□□□□□ -1.49
SGF73	YGL066W	YGR039W	P53225	103 aa		5.75	□□□□□ -1.49
SGF73	YGL066W	PBI2	P0CT04	75 aa	Known RBP	5.74	□□□□□ -1.49
SGF73	YGL066W	TOS8	P53147	276 aa		5.74	□□□□□ -1.49
SGF73	YGL066W	CAX4	P53223	239 aa		5.74	□□□□□ -1.49
SGF73	YGL066W	YCL021W-A	Q96VH3	125 aa		5.74	□□□□□ -1.49
SGF73	YGL066W	YHR139C-A	O13536	103 aa		5.73	□□□□□ -1.49
SGF73	YGL066W	YEL008W	P40001	126 aa		5.73	□□□□□ -1.49
SGF73	YGL066W	YNL194C	P40169	301 aa		5.73	□□□□□ -1.49
SGF73	YGL066W	TMC1	Q08422	150 aa	Predicted RBP	5.73	□□□□□ -1.49
SGF73	YGL066W	YIR020C	P40575	100 aa		5.73	□□□□□ -1.49
SGF73	YGL066W	COX12	Q01519	83 aa		5.73	□□□□□ -1.49
SGF73	YGL066W	YDR119W-A	Q2V2P9	66 aa		5.73	□□□□□ -1.49
SGF73	YGL066W	YIR021W-A	Q3E739	70 aa		5.73	□□□□□ -1.49
SGF73	YGL066W	QCR8	P08525	94 aa		5.72	□□□□□ -1.49
SGF73	YGL066W	VMA11	P32842	164 aa		5.72	□□□□□ -1.49
SGF73	YGL066W	CWP2	P43497	92 aa		5.72	□□□□□ -1.49
SGF73	YGL066W	HUR1	P45820	110 aa		5.72	□□□□□ -1.49
SGF73	YGL066W	PBA1	Q05778	276 aa		5.72	□□□□□ -1.49
SGF73	YGL066W	YDR381C-A	Q3E6R5	114 aa		5.72	□□□□□ -1.49
SGF73	YGL066W	ENV10	Q99382	181 aa		5.72	□□□□□ -1.49
SGF73	YGL066W	RPL11A	P0C0W9	174 aa	Known RBP	5.71	□□□□□ -1.49
SGF73	YGL066W	INO2	P26798	304 aa		5.71	□□□□□ -1.49
SGF73	YGL066W	MIG3	P39943	394 aa		5.71	□□□□□ -1.49
SGF73	YGL066W	RPL11B	Q3E757	174 aa	Predicted RBP	5.71	□□□□□ -1.49
SGF73	YGL066W	URA2	P07259	2214 aa	Known RBP	5.71	□□□□□ -1.5
SGF73	YGL066W	RRT13	P40042	185 aa		5.7	□□□□□ -1.5
SGF73	YGL066W	YFR035C	P43608	114 aa		5.7	□□□□□ -1.5
SGF73	YGL066W	COF1	Q03048	143 aa	Known RBP	5.7	□□□□□ -1.5
SGF73	YGL066W	SIM1	P40472	476 aa		5.69	□□□□□ -1.5
SGF73	YGL066W	YIL059C	P40520	121 aa		5.69	□□□□□ -1.5
SGF73	YGL066W	TIM10	P87108	93 aa		5.69	□□□□□ -1.5
SGF73	YGL066W	YMR244W	Q04018	355 aa		5.69	□□□□□ -1.5
SGF73	YGL066W	MRPL24	P36525	258 aa	Predicted RBP	5.69	□□□□□ -1.5
SGF73	YGL066W	YPL278C	Q08990	100 aa		5.69	□□□□□ -1.5
SGF73	YGL066W	SMP1	P38128	452 aa		5.68	□□□□□ -1.5
SGF73	YGL066W	YDL186W	P48568	277 aa		5.67	□□□□□ -1.5
SGF73	YGL066W	HOR7	Q05827	59 aa		5.67	□□□□□ -1.5
SGF73	YGL066W	SVP26	P38869	228 aa		5.67	□□□□□ -1.5
SGF73	YGL066W	KRE9	P39005	276 aa		5.67	□□□□□ -1.5
SGF73	YGL066W	RGM1	Q00453	211 aa		5.67	□□□□□ -1.5
SGF73	YGL066W	MRPS8	Q03799	155 aa		5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 56 ms