RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W RPS27BP38711 82 aa4.05□□□□□ -1.76
UBP9YER098W VTC1P40046 129 aaRIP-Chip data4.05□□□□□ -1.76not detected
UBP9YER098W YHR139C-AO13536 103 aa4.04□□□□□ -1.76
UBP9YER098W HHF1P02309 103 aaKnown RBP4.04□□□□□ -1.76
UBP9YER098W MRPL49P40858 161 aaPredicted RBP4.04□□□□□ -1.76
UBP9YER098W ECO1P43605 281 aa4.04□□□□□ -1.76
UBP9YER098W YGL258W-AQ3E740 77 aa4.04□□□□□ -1.76
UBP9YER098W MDM35O60200 86 aa4.04□□□□□ -1.76
UBP9YER098W SKI6P46948 246 aaPredicted RBP4.04□□□□□ -1.76
UBP9YER098W NAG1Q8TGN9 163 aa4.04□□□□□ -1.76
UBP9YER098W RPL27AP0C2H6 136 aaKnown RBP4.03□□□□□ -1.76
UBP9YER098W HMRA2P0CY13 119 aa4.03□□□□□ -1.76
UBP9YER098W MED6P38782 295 aa4.03□□□□□ -1.76
UBP9YER098W HSK3P69852 69 aa4.03□□□□□ -1.76
UBP9YER098W GPI19Q04082 140 aa4.03□□□□□ -1.76
UBP9YER098W NRM1P53718 249 aa4.02□□□□□ -1.77
UBP9YER098W MIX14Q04341 121 aa4.02□□□□□ -1.77
UBP9YER098W PBA1Q05778 276 aa4.02□□□□□ -1.77
UBP9YER098W IGO2Q9P305 131 aa4.02□□□□□ -1.77
UBP9YER098W FAS1P07149 2051 aaKnown RBP4.02□□□□□ -1.77
UBP9YER098W VPS13Q07878 3144 aa4.02□□□□□ -1.77
UBP9YER098W YFL051CP43552 160 aa4.02□□□□□ -1.77
UBP9YER098W SWS2P53937 143 aa4.02□□□□□ -1.77
UBP9YER098W RPS28BP0C0X0 67 aaKnown RBP4.01□□□□□ -1.77
UBP9YER098W SMP1P38128 452 aa4.01□□□□□ -1.77
UBP9YER098W AIM34Q03673 198 aa4.01□□□□□ -1.77
UBP9YER098W RPS28AQ3E7X9 67 aaPredicted RBP4.01□□□□□ -1.77
UBP9YER098W YHL042WP38729 150 aa4.01□□□□□ -1.77
UBP9YER098W GON7P46984 123 aa4.01□□□□□ -1.77
UBP9YER098W TIM22Q12328 207 aa4.01□□□□□ -1.77
UBP9YER098W Q0255P03881 472 aa4□□□□□ -1.77
UBP9YER098W RPL2AP0CX45 254 aaKnown RBP4□□□□□ -1.77
UBP9YER098W RPL2BP0CX46 254 aaKnown RBP4□□□□□ -1.77
UBP9YER098W SBH1P52870 82 aa4□□□□□ -1.77
UBP9YER098W ALG13P53178 202 aa4□□□□□ -1.77
UBP9YER098W YDR114CQ04597 100 aa4□□□□□ -1.77
UBP9YER098W YLR042CQ07990 161 aa4□□□□□ -1.77
UBP9YER098W NIP7Q08962 181 aaKnown RBP4□□□□□ -1.77
UBP9YER098W PPT2Q12036 173 aa4□□□□□ -1.77
UBP9YER098W PBI2P0CT04 75 aaKnown RBP4□□□□□ -1.77
UBP9YER098W YCR050CP25630 102 aa4□□□□□ -1.77
UBP9YER098W PRM7Q12459 698 aa4□□□□□ -1.77
UBP9YER098W COX12Q01519 83 aa3.99□□□□□ -1.77
UBP9YER098W UPS1Q05776 175 aa3.99□□□□□ -1.77
UBP9YER098W RRS1Q08746 203 aaKnown RBP3.99□□□□□ -1.77
UBP9YER098W BPH1P25356 2167 aa3.99□□□□□ -1.77
UBP9YER098W FPR2P32472 135 aa3.98□□□□□ -1.77
UBP9YER098W YNL217WP40152 326 aa3.98□□□□□ -1.77
UBP9YER098W YMR320WQ04897 101 aa3.98□□□□□ -1.77
UBP9YER098W MGR2Q02889 113 aa3.98□□□□□ -1.77
UBP9YER098W COA3Q3E7B2 85 aa3.98□□□□□ -1.77
UBP9YER098W YRA2P36036 203 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
UBP9YER098W YNL190WP53872 204 aa3.97□□□□□ -1.77
UBP9YER098W YPL038W-AQ3E7B4 63 aa3.97□□□□□ -1.77
UBP9YER098W TOM6P33448 61 aa3.97□□□□□ -1.77
UBP9YER098W YGR018CP53211 109 aa3.97□□□□□ -1.77
UBP9YER098W AIM11P87275 137 aa3.96□□□□□ -1.78
UBP9YER098W YPL278CQ08990 100 aa3.96□□□□□ -1.78
UBP9YER098W RPL28P02406 149 aaKnown RBP3.96□□□□□ -1.78
UBP9YER098W YBL071CP38185 102 aa3.96□□□□□ -1.78
UBP9YER098W YHL018WP38744 120 aaPredicted RBP3.96□□□□□ -1.78
UBP9YER098W GLE2P40066 365 aa3.96□□□□□ -1.78
UBP9YER098W REE1P40893 198 aa3.96□□□□□ -1.78
UBP9YER098W YLR194CQ05777 254 aa3.96□□□□□ -1.78
UBP9YER098W IRC23Q08416 157 aa3.96□□□□□ -1.78
UBP9YER098W SEN1Q00416 2231 aaKnown RBP3.95□□□□□ -1.78
UBP9YER098W IRA2P19158 3079 aa3.95□□□□□ -1.78
UBP9YER098W PFY1P07274 126 aa3.95□□□□□ -1.78
UBP9YER098W RRT13P40042 185 aa3.95□□□□□ -1.78
UBP9YER098W AIM19P40502 157 aa3.95□□□□□ -1.78
UBP9YER098W YDR381C-AQ3E6R5 114 aa3.95□□□□□ -1.78
UBP9YER098W YBR209WP38311 105 aa3.95□□□□□ -1.78
UBP9YER098W KRE9P39005 276 aa3.95□□□□□ -1.78
UBP9YER098W SDC1Q03323 175 aa3.95□□□□□ -1.78
UBP9YER098W ATP15P21306 62 aa3.93□□□□□ -1.78
UBP9YER098W YDR115WQ04598 105 aa3.93□□□□□ -1.78
UBP9YER098W MIG3P39943 394 aa3.93□□□□□ -1.78
UBP9YER098W PGU1P47180 361 aa3.92□□□□□ -1.78
UBP9YER098W TOS6P48560 102 aa3.92□□□□□ -1.78
UBP9YER098W YHR214C-DP0CX93 97 aa3.92□□□□□ -1.78
UBP9YER098W FPR1P20081 114 aaKnown RBP3.92□□□□□ -1.78
UBP9YER098W KSH1Q8TGJ3 72 aa3.92□□□□□ -1.78
UBP9YER098W YHR213WP0CI67 198 aa3.91□□□□□ -1.78
UBP9YER098W SVP26P38869 228 aa3.91□□□□□ -1.78
UBP9YER098W SPG4Q04438 115 aa3.91□□□□□ -1.78
UBP9YER098W KTI11Q3E840 82 aa3.91□□□□□ -1.78
UBP9YER098W BET1P22804 142 aa3.91□□□□□ -1.78
UBP9YER098W YER187WP40102 141 aa3.91□□□□□ -1.78
UBP9YER098W YSY6P38374 65 aa3.9□□□□□ -1.79
UBP9YER098W SPI1P40092 148 aa3.9□□□□□ -1.79
UBP9YER098W EMC6Q12431 108 aa3.9□□□□□ -1.79
UBP9YER098W YLR342W-AQ3E810 57 aa3.9□□□□□ -1.79
UBP9YER098W LDB16P25587 256 aa3.9□□□□□ -1.79
UBP9YER098W YMR244WQ04018 355 aa3.9□□□□□ -1.79
UBP9YER098W YMR175W-AQ3E766 64 aa3.9□□□□□ -1.79
UBP9YER098W YOR008C-AQ3E7B9 74 aa3.9□□□□□ -1.79
UBP9YER098W FAB1P34756 2278 aa3.89□□□□□ -1.79
UBP9YER098W IMP2P46972 177 aa3.89□□□□□ -1.79
UBP9YER098W YIL086CP40503 102 aa3.88□□□□□ -1.79
UBP9YER098W IGD1P43598 195 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms