RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	YMR007W	Q03675	126 aa		2.83	□□□□□ -1.96
TRP4	YDR354W	SMT3	Q12306	101 aa	Known RBP	2.83	□□□□□ -1.96
TRP4	YDR354W	TIM22	Q12328	207 aa		2.83	□□□□□ -1.96
TRP4	YDR354W	YGL010W	P25338	174 aa		2.82	□□□□□ -1.96
TRP4	YDR354W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	2.82	□□□□□ -1.96	not detected
TRP4	YDR354W	HSP10	P38910	106 aa		2.82	□□□□□ -1.96
TRP4	YDR354W	YER134C	P40081	178 aa		2.82	□□□□□ -1.96
TRP4	YDR354W	SPG1	P50088	95 aa		2.82	□□□□□ -1.96
TRP4	YDR354W	GEP7	P53171	287 aa		2.82	□□□□□ -1.96
TRP4	YDR354W	YPL039W	Q03080	316 aa		2.82	□□□□□ -1.96
TRP4	YDR354W	NAT5	Q08689	176 aa		2.82	□□□□□ -1.96
TRP4	YDR354W	POC4	Q12245	148 aa	Predicted RBP	2.82	□□□□□ -1.96
TRP4	YDR354W	YDR034W-B	Q6Q5X2	51 aa		2.82	□□□□□ -1.96
TRP4	YDR354W	RAD6	P06104	172 aa		2.81	□□□□□ -1.96
TRP4	YDR354W	QCR9	P22289	66 aa		2.81	□□□□□ -1.96
TRP4	YDR354W	YER188W	P40103	239 aa		2.81	□□□□□ -1.96
TRP4	YDR354W	CCS1	P40202	249 aa	Known RBP	2.81	□□□□□ -1.96
TRP4	YDR354W	YIL163C	P40448	117 aa		2.81	□□□□□ -1.96
TRP4	YDR354W	YFL019C	P43576	117 aa		2.81	□□□□□ -1.96
TRP4	YDR354W	ELC1	Q03071	99 aa		2.81	□□□□□ -1.96
TRP4	YDR354W	FIT3	Q08907	204 aa		2.81	□□□□□ -1.96
TRP4	YDR354W	RPS22A	P0C0W1	130 aa	Known RBP	2.8	□□□□□ -1.96
TRP4	YDR354W	PAM17	P36147	197 aa		2.8	□□□□□ -1.96
TRP4	YDR354W	YNL200C	P40165	246 aa	Known RBP	2.8	□□□□□ -1.96
TRP4	YDR354W	GAT4	P40569	121 aa		2.8	□□□□□ -1.96
TRP4	YDR354W	DSK2	P48510	373 aa		2.8	□□□□□ -1.96
TRP4	YDR354W	SHH3	Q04487	196 aa		2.8	□□□□□ -1.96
TRP4	YDR354W	TVP18	Q04767	167 aa		2.8	□□□□□ -1.96
TRP4	YDR354W	CSI2	Q08054	341 aa		2.8	□□□□□ -1.96
TRP4	YDR354W	YDL157C	Q12082	118 aa		2.8	□□□□□ -1.96
TRP4	YDR354W	YOR097C	Q12274	175 aa	Predicted RBP	2.8	□□□□□ -1.96
TRP4	YDR354W	YCR075W-A	Q3E830	75 aa		2.8	□□□□□ -1.96
TRP4	YDR354W	ISD11	Q6Q560	94 aa		2.8	□□□□□ -1.96
TRP4	YDR354W	YAR023C	D6VPM8	179 aa		2.79	□□□□□ -1.96
TRP4	YDR354W	ATP15	P21306	62 aa		2.79	□□□□□ -1.96
TRP4	YDR354W	UTR5	P32630	166 aa		2.79	□□□□□ -1.96
TRP4	YDR354W	PAU16	P35994	123 aa		2.79	□□□□□ -1.96
TRP4	YDR354W	MRPS8	Q03799	155 aa		2.79	□□□□□ -1.96
TRP4	YDR354W	HAP3	P13434	144 aa		2.78	□□□□□ -1.96
TRP4	YDR354W	ROX3	P25046	220 aa		2.78	□□□□□ -1.96
TRP4	YDR354W	VTC1	P40046	129 aa	RIP-Chip data	2.78	□□□□□ -1.96	not detected
TRP4	YDR354W	YER135C	P40082	130 aa		2.78	□□□□□ -1.96
TRP4	YDR354W	ARC15	P40518	154 aa	RIP-Chip data	2.78	□□□□□ -1.96	not detected
TRP4	YDR354W	YPL067C	Q02754	198 aa		2.78	□□□□□ -1.96
TRP4	YDR354W	YHP1	Q04116	353 aa		2.78	□□□□□ -1.96
TRP4	YDR354W	YMR103C	Q04436	120 aa		2.78	□□□□□ -1.96
TRP4	YDR354W	RIM9	Q04734	239 aa		2.78	□□□□□ -1.96
TRP4	YDR354W	PAU23	Q07987	124 aa		2.78	□□□□□ -1.96
TRP4	YDR354W	YOR105W	Q08504	108 aa		2.78	□□□□□ -1.96
TRP4	YDR354W	PAU17	Q12370	124 aa		2.78	□□□□□ -1.96
TRP4	YDR354W	YHR214C-D	P0CX93	97 aa		2.77	□□□□□ -1.97
TRP4	YDR354W	FYV4	P38783	130 aa	Predicted RBP	2.77	□□□□□ -1.97
TRP4	YDR354W	SNU13	P39990	126 aa	Known RBP	2.77	□□□□□ -1.97
TRP4	YDR354W	CYB5	P40312	120 aa		2.77	□□□□□ -1.97
TRP4	YDR354W	YDR274C	P87283	123 aa		2.77	□□□□□ -1.97
TRP4	YDR354W	MIX14	Q04341	121 aa		2.77	□□□□□ -1.97
TRP4	YDR354W	FYV12	Q08559	129 aa		2.77	□□□□□ -1.97
TRP4	YDR354W	ATG40	Q99325	256 aa		2.77	□□□□□ -1.97
TRP4	YDR354W	SEC11	P15367	167 aa		2.76	□□□□□ -1.97
TRP4	YDR354W	BRP1	P53194	125 aa		2.76	□□□□□ -1.97
TRP4	YDR354W	YMR295C	Q03559	197 aa		2.76	□□□□□ -1.97
TRP4	YDR354W	UPS3	Q04006	179 aa		2.76	□□□□□ -1.97
TRP4	YDR354W	YDR114C	Q04597	100 aa		2.76	□□□□□ -1.97
TRP4	YDR354W	RPS22B	Q3E7Y3	130 aa	Known RBP	2.76	□□□□□ -1.97
TRP4	YDR354W	DDR48	P18899	430 aa	Known RBP	2.75	□□□□□ -1.97
TRP4	YDR354W	TOM40	P23644	387 aa	Known RBP	2.75	□□□□□ -1.97
TRP4	YDR354W	YHR130C	P38834	111 aa		2.75	□□□□□ -1.97
TRP4	YDR354W	YAR029W	P39549	74 aa		2.75	□□□□□ -1.97
TRP4	YDR354W	YER084W	P40057	128 aa		2.75	□□□□□ -1.97
TRP4	YDR354W	YFR045W	P43617	309 aa		2.75	□□□□□ -1.97
TRP4	YDR354W	MIC27	P50945	234 aa		2.75	□□□□□ -1.97
TRP4	YDR354W	ATP19	P81451	68 aa		2.75	□□□□□ -1.97
TRP4	YDR354W	RAF1	Q06891	181 aa		2.75	□□□□□ -1.97
TRP4	YDR354W	GCN1	P33892	2672 aa	Known RBP	2.74	□□□□□ -1.97
TRP4	YDR354W	HMRA1	P0CY11	126 aa		2.74	□□□□□ -1.97
TRP4	YDR354W	YCR050C	P25630	102 aa		2.74	□□□□□ -1.97
TRP4	YDR354W	FZF1	P32805	299 aa		2.74	□□□□□ -1.97
TRP4	YDR354W	YHR125W	P38831	101 aa		2.74	□□□□□ -1.97
TRP4	YDR354W	HUA1	P40325	198 aa		2.74	□□□□□ -1.97
TRP4	YDR354W	TOM7	P53507	60 aa		2.74	□□□□□ -1.97
TRP4	YDR354W	YNR064C	P53750	290 aa		2.74	□□□□□ -1.97
TRP4	YDR354W	LIP1	Q03579	150 aa		2.74	□□□□□ -1.97
TRP4	YDR354W	ATO3	Q12359	275 aa		2.74	□□□□□ -1.97
TRP4	YDR354W	YHR173C	P38864	112 aa		2.73	□□□□□ -1.97
TRP4	YDR354W	CTR2	P38865	189 aa		2.73	□□□□□ -1.97
TRP4	YDR354W	ECO1	P43605	281 aa		2.73	□□□□□ -1.97
TRP4	YDR354W	THG1	P53215	237 aa	Known RBP	2.73	□□□□□ -1.97
TRP4	YDR354W	FIT2	Q08906	153 aa		2.73	□□□□□ -1.97
TRP4	YDR354W	ATP20	Q12233	115 aa		2.73	□□□□□ -1.97
TRP4	YDR354W	YGL258W-A	Q3E740	77 aa		2.73	□□□□□ -1.97
TRP4	YDR354W	SCS22	Q6Q595	175 aa		2.73	□□□□□ -1.97
TRP4	YDR354W	URA2	P07259	2214 aa	Known RBP	2.72	□□□□□ -1.97
TRP4	YDR354W	LSM2	P38203	95 aa	Known RBP	2.72	□□□□□ -1.97
TRP4	YDR354W	YHR138C	P38841	114 aa	Predicted RBP	2.72	□□□□□ -1.97
TRP4	YDR354W	YNL198C	P40166	100 aa		2.72	□□□□□ -1.97
TRP4	YDR354W	MSL1	P40567	111 aa	Predicted RBP	2.72	□□□□□ -1.97
TRP4	YDR354W	MRPL31	P14063	131 aa	Predicted RBP	2.71	□□□□□ -1.98
TRP4	YDR354W	MIX17	Q03667	156 aa		2.71	□□□□□ -1.98
TRP4	YDR354W	FCF1	Q05498	189 aa	Predicted RBP	2.71	□□□□□ -1.98
TRP4	YDR354W	YOR032W-A	Q8TGS1	66 aa		2.71	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 41 ms