RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C RPB9P27999 122 aa3.53□□□□□ -1.84
PRP28YDR243C YBR144CP34215 104 aa3.53□□□□□ -1.84
PRP28YDR243C YHR173CP38864 112 aa3.53□□□□□ -1.84
PRP28YDR243C PET8P38921 284 aa3.53□□□□□ -1.84
PRP28YDR243C PET191Q02772 108 aa3.53□□□□□ -1.84
PRP28YDR243C YLR112WQ12130 139 aa3.53□□□□□ -1.84
PRP28YDR243C SPS100P13130 326 aa3.53□□□□□ -1.84
PRP28YDR243C YKR045CP36138 183 aa3.53□□□□□ -1.84
PRP28YDR243C YHR180WP38868 163 aa3.53□□□□□ -1.84
PRP28YDR243C ICS3P47034 131 aa3.53□□□□□ -1.84
PRP28YDR243C YMR181CQ03231 154 aa3.53□□□□□ -1.84
PRP28YDR243C PPT2Q12036 173 aa3.53□□□□□ -1.84
PRP28YDR243C YHR214C-DP0CX93 97 aa3.52□□□□□ -1.85
PRP28YDR243C DSS4P32601 143 aa3.52□□□□□ -1.85
PRP28YDR243C RPL32P38061 130 aaKnown RBP3.52□□□□□ -1.85
PRP28YDR243C CTR2P38865 189 aa3.52□□□□□ -1.85
PRP28YDR243C AIM19P40502 157 aa3.52□□□□□ -1.85
PRP28YDR243C YFR035CP43608 114 aa3.52□□□□□ -1.85
PRP28YDR243C YGL034CP53186 121 aa3.52□□□□□ -1.85
PRP28YDR243C PBA1Q05778 276 aa3.52□□□□□ -1.85
PRP28YDR243C TIM22Q12328 207 aa3.52□□□□□ -1.85
PRP28YDR243C YBR209WP38311 105 aa3.51□□□□□ -1.85
PRP28YDR243C MTC6P38849 526 aa3.51□□□□□ -1.85
PRP28YDR243C RSM18P40033 138 aa3.51□□□□□ -1.85
PRP28YDR243C VTC1P40046 129 aaRIP-Chip data3.51□□□□□ -1.85not detected
PRP28YDR243C TOS8P53147 276 aa3.51□□□□□ -1.85
PRP28YDR243C API2Q04413 109 aa3.51□□□□□ -1.85
PRP28YDR243C YOL160WQ08321 113 aa3.51□□□□□ -1.85
PRP28YDR243C TSC3Q3E790 80 aa3.51□□□□□ -1.85
PRP28YDR243C YKR032WP36127 104 aa3.51□□□□□ -1.85
PRP28YDR243C SPI1P40092 148 aa3.51□□□□□ -1.85
PRP28YDR243C YGL193CP53097 103 aa3.51□□□□□ -1.85
PRP28YDR243C YDR274CP87283 123 aa3.51□□□□□ -1.85
PRP28YDR243C YML122CQ03207 126 aa3.51□□□□□ -1.85
PRP28YDR243C YMR295CQ03559 197 aa3.51□□□□□ -1.85
PRP28YDR243C YDL009CQ12210 107 aa3.51□□□□□ -1.85
PRP28YDR243C HSP12P22943 109 aaKnown RBP3.5□□□□□ -1.85
PRP28YDR243C TIM17P39515 158 aa3.5□□□□□ -1.85
PRP28YDR243C HUA1P40325 198 aa3.5□□□□□ -1.85
PRP28YDR243C ECO1P43605 281 aa3.5□□□□□ -1.85
PRP28YDR243C NCA3P46955 337 aa3.5□□□□□ -1.85
PRP28YDR243C YOR192C-CQ3E736 78 aa3.5□□□□□ -1.85
PRP28YDR243C YAL065CO13511 128 aa3.49□□□□□ -1.85
PRP28YDR243C HHF1P02309 103 aaKnown RBP3.49□□□□□ -1.85
PRP28YDR243C ARF2P19146 181 aaKnown RBP3.49□□□□□ -1.85
PRP28YDR243C ERI1P62651 68 aaKnown RBP3.49□□□□□ -1.85
PRP28YDR243C MGR2Q02889 113 aa3.49□□□□□ -1.85
PRP28YDR243C YML100W-AQ8TGT0 57 aa3.49□□□□□ -1.85
PRP28YDR243C RPS14AP06367 137 aaKnown RBP3.48□□□□□ -1.85
PRP28YDR243C AIM4P38305 123 aaPredicted RBP3.48□□□□□ -1.85
PRP28YDR243C PCL5P38794 229 aa3.48□□□□□ -1.85
PRP28YDR243C MPC2P38857 129 aa3.48□□□□□ -1.85
PRP28YDR243C MIG3P39943 394 aa3.48□□□□□ -1.85
PRP28YDR243C YNL208WP40159 199 aaKnown RBP3.48□□□□□ -1.85
PRP28YDR243C PCP1P53259 346 aa3.48□□□□□ -1.85
PRP28YDR243C RPL26AP05743 127 aaKnown RBP3.48□□□□□ -1.85
PRP28YDR243C RPL15AP05748 204 aaKnown RBP3.48□□□□□ -1.85
PRP28YDR243C YEL045CP32616 141 aa3.48□□□□□ -1.85
PRP28YDR243C DCV1P43595 202 aa3.48□□□□□ -1.85
PRP28YDR243C HUR1P45820 110 aa3.48□□□□□ -1.85
PRP28YDR243C TOM7P53507 60 aa3.48□□□□□ -1.85
PRP28YDR243C RPL15BP54780 204 aaPredicted RBP3.48□□□□□ -1.85
PRP28YDR243C LDB16P25587 256 aa3.47□□□□□ -1.85
PRP28YDR243C YHR022CP38763 256 aa3.47□□□□□ -1.85
PRP28YDR243C FIT2Q08906 153 aa3.47□□□□□ -1.85
PRP28YDR243C YOR314WQ12506 109 aa3.47□□□□□ -1.85
PRP28YDR243C YLR285C-AQ3E771 56 aa3.47□□□□□ -1.85
PRP28YDR243C COA3Q3E7B2 85 aa3.47□□□□□ -1.85
PRP28YDR243C MSA2P36157 363 aa3.46□□□□□ -1.86
PRP28YDR243C TDA2P40045 126 aa3.46□□□□□ -1.86
PRP28YDR243C IMP2P46972 177 aa3.46□□□□□ -1.86
PRP28YDR243C YLR194CQ05777 254 aa3.46□□□□□ -1.86
PRP28YDR243C YLR162WQ06235 118 aa3.46□□□□□ -1.86
PRP28YDR243C YLR012CQ07927 99 aa3.46□□□□□ -1.86
PRP28YDR243C CRC1Q12289 327 aa3.46□□□□□ -1.86
PRP28YDR243C YOR343CQ12484 108 aa3.46□□□□□ -1.86
PRP28YDR243C YOR381W-AQ3E804 55 aa3.46□□□□□ -1.86
PRP28YDR243C YGR121W-AQ3E816 71 aa3.46□□□□□ -1.86
PRP28YDR243C YHR214C-EQ8TGK0 99 aa3.46□□□□□ -1.86
PRP28YDR243C HMRA2P0CY13 119 aa3.46□□□□□ -1.86
PRP28YDR243C AGA1P32323 725 aa3.46□□□□□ -1.86
PRP28YDR243C YGL088WP53151 121 aa3.46□□□□□ -1.86
PRP28YDR243C YOL118CQ08259 102 aa3.46□□□□□ -1.86
PRP28YDR243C VPS68Q12016 184 aa3.46□□□□□ -1.86
PRP28YDR243C MDM35O60200 86 aa3.45□□□□□ -1.86
PRP28YDR243C ATP20Q12233 115 aa3.45□□□□□ -1.86
PRP28YDR243C YHL005CP38752 130 aa3.44□□□□□ -1.86
PRP28YDR243C TOS6P48560 102 aa3.44□□□□□ -1.86
PRP28YDR243C SPG1P50088 95 aa3.44□□□□□ -1.86
PRP28YDR243C YHP1Q04116 353 aa3.44□□□□□ -1.86
PRP28YDR243C NCE102Q12207 173 aaRIP-Chip data3.44□□□□□ -1.86not detected
PRP28YDR243C YLR156WP0CE96 114 aa3.43□□□□□ -1.86
PRP28YDR243C YLR159WP0CE97 114 aa3.43□□□□□ -1.86
PRP28YDR243C YLR161WP0CE98 114 aa3.43□□□□□ -1.86
PRP28YDR243C RPS14BP39516 138 aaKnown RBP3.43□□□□□ -1.86
PRP28YDR243C YAL064WP39711 94 aa3.43□□□□□ -1.86
PRP28YDR243C YBR182C-AQ8TGU6 64 aa3.43□□□□□ -1.86
PRP28YDR243C RNH203Q12338 110 aa3.43□□□□□ -1.86
PRP28YDR243C PRM7Q12459 698 aa3.43□□□□□ -1.86
PRP28YDR243C ARF1P11076 181 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 60.8 ms