RNA–Protein interactions for RNA: YDL133W

SRF1, Transcript of Regulator of phospholipase D (Spo14p), yeastyeast

Gene SRF1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRF1YDL133W SHH4Q06236 168 aa5.48□□□□□ -1.53
SRF1YDL133W PRM7Q12459 698 aa5.48□□□□□ -1.53
SRF1YDL133W RPS28AQ3E7X9 67 aaPredicted RBP5.48□□□□□ -1.53
SRF1YDL133W YBR121C-AP0C5L4 52 aa5.48□□□□□ -1.53
SRF1YDL133W INO2P26798 304 aa5.48□□□□□ -1.53
SRF1YDL133W URM1P40554 99 aaPredicted RBP5.48□□□□□ -1.53
SRF1YDL133W YJL027CP47063 138 aaPredicted RBP5.48□□□□□ -1.53
SRF1YDL133W NCE103P53615 221 aa5.48□□□□□ -1.53
SRF1YDL133W MRPS12P53732 153 aa5.48□□□□□ -1.53
SRF1YDL133W PBI2P0CT04 75 aaKnown RBP5.47□□□□□ -1.53
SRF1YDL133W AIM19P40502 157 aa5.47□□□□□ -1.53
SRF1YDL133W SIP18P50263 79 aa5.47□□□□□ -1.53
SRF1YDL133W YOR029WQ12243 111 aa5.47□□□□□ -1.53
SRF1YDL133W YMR105W-AQ8TGS8 64 aa5.47□□□□□ -1.53
SRF1YDL133W RPL28P02406 149 aaKnown RBP5.46□□□□□ -1.54
SRF1YDL133W ATP15P21306 62 aa5.46□□□□□ -1.54
SRF1YDL133W YDR209CQ03480 137 aa5.46□□□□□ -1.54
SRF1YDL133W RPL42AP0CX27 106 aaKnown RBP5.45□□□□□ -1.54
SRF1YDL133W RPL42BP0CX28 106 aaKnown RBP5.45□□□□□ -1.54
SRF1YDL133W RPL2AP0CX45 254 aaKnown RBP5.45□□□□□ -1.54
SRF1YDL133W RPL2BP0CX46 254 aaKnown RBP5.45□□□□□ -1.54
SRF1YDL133W LTP1P40347 161 aa5.45□□□□□ -1.54
SRF1YDL133W SBH1P52870 82 aa5.45□□□□□ -1.54
SRF1YDL133W RNH203Q12338 110 aa5.45□□□□□ -1.54
SRF1YDL133W BNA1P47096 177 aa5.44□□□□□ -1.54
SRF1YDL133W YNL190WP53872 204 aa5.44□□□□□ -1.54
SRF1YDL133W PBA1Q05778 276 aa5.44□□□□□ -1.54
SRF1YDL133W PEX17P40155 199 aa5.43□□□□□ -1.54
SRF1YDL133W YOL160WQ08321 113 aa5.43□□□□□ -1.54
SRF1YDL133W RPL39P04650 51 aa5.42□□□□□ -1.54
SRF1YDL133W YCR050CP25630 102 aa5.42□□□□□ -1.54
SRF1YDL133W MSA2P36157 363 aa5.42□□□□□ -1.54
SRF1YDL133W MPC2P38857 129 aa5.42□□□□□ -1.54
SRF1YDL133W SVP26P38869 228 aa5.42□□□□□ -1.54
SRF1YDL133W SIM1P40472 476 aa5.42□□□□□ -1.54
SRF1YDL133W GAT3Q07928 141 aa5.42□□□□□ -1.54
SRF1YDL133W BEM2P39960 2167 aaKnown RBP5.42□□□□□ -1.54
SRF1YDL133W RPL18AP0CX49 186 aaKnown RBP5.41□□□□□ -1.54
SRF1YDL133W RPL18BP0CX50 186 aaKnown RBP5.41□□□□□ -1.54
SRF1YDL133W YHL018WP38744 120 aaPredicted RBP5.41□□□□□ -1.54
SRF1YDL133W DCV1P43595 202 aa5.41□□□□□ -1.54
SRF1YDL133W YJR146WP47174 117 aa5.41□□□□□ -1.54
SRF1YDL133W EMC6Q12431 108 aa5.41□□□□□ -1.54
SRF1YDL133W ADH5P38113 351 aaKnown RBP5.4□□□□□ -1.55
SRF1YDL133W HUR1P45820 110 aa5.4□□□□□ -1.55
SRF1YDL133W UBC11P52492 156 aa5.4□□□□□ -1.55
SRF1YDL133W MLF3P32047 452 aa5.39□□□□□ -1.55
SRF1YDL133W YSY6P38374 65 aa5.39□□□□□ -1.55
SRF1YDL133W KTI11Q3E840 82 aa5.39□□□□□ -1.55
SRF1YDL133W MRPL38P35996 138 aaPredicted RBP5.38□□□□□ -1.55
SRF1YDL133W ERG28P40030 148 aa5.38□□□□□ -1.55
SRF1YDL133W ALG13P53178 202 aa5.38□□□□□ -1.55
SRF1YDL133W YNL234WP53857 426 aa5.38□□□□□ -1.55
SRF1YDL133W FAB1P34756 2278 aa5.38□□□□□ -1.55
SRF1YDL133W TRP1P00912 224 aa5.37□□□□□ -1.55
SRF1YDL133W RPS23AP0CX29 145 aaKnown RBP5.37□□□□□ -1.55
SRF1YDL133W RPS23BP0CX30 145 aa5.37□□□□□ -1.55
SRF1YDL133W RPL16AP26784 199 aaKnown RBP5.37□□□□□ -1.55
SRF1YDL133W YGR219WP53307 113 aa5.37□□□□□ -1.55
SRF1YDL133W IES6P32617 166 aa5.36□□□□□ -1.55
SRF1YDL133W SHU1P38751 150 aa5.36□□□□□ -1.55
SRF1YDL133W RRT13P40042 185 aa5.36□□□□□ -1.55
SRF1YDL133W YBR200W-AQ3E755 54 aa5.36□□□□□ -1.55
SRF1YDL133W QCR8P08525 94 aa5.35□□□□□ -1.55
SRF1YDL133W RPL16BP26785 198 aaKnown RBP5.35□□□□□ -1.55
SRF1YDL133W YER187WP40102 141 aa5.35□□□□□ -1.55
SRF1YDL133W POR2P40478 281 aa5.35□□□□□ -1.55
SRF1YDL133W YMR175W-AQ3E766 64 aa5.35□□□□□ -1.55
SRF1YDL133W RPL15AP05748 204 aaKnown RBP5.34□□□□□ -1.55
SRF1YDL133W PBP4Q07362 185 aaKnown RBP5.34□□□□□ -1.55
SRF1YDL133W CTR2P38865 189 aa5.33□□□□□ -1.56
SRF1YDL133W YGR025WP53216 100 aa5.33□□□□□ -1.56
SRF1YDL133W PPT2Q12036 173 aa5.33□□□□□ -1.56
SRF1YDL133W UTH1P36135 365 aa5.32□□□□□ -1.56
SRF1YDL133W YHR022CP38763 256 aa5.32□□□□□ -1.56
SRF1YDL133W RGM1Q00453 211 aa5.32□□□□□ -1.56
SRF1YDL133W YLR412C-AQ3E742 68 aa5.32□□□□□ -1.56
SRF1YDL133W KRE9P39005 276 aa5.31□□□□□ -1.56
SRF1YDL133W YNL194CP40169 301 aa5.31□□□□□ -1.56
SRF1YDL133W ARC15P40518 154 aaRIP-Chip data5.31□□□□□ -1.56not detected
SRF1YDL133W KEG1P43614 200 aa5.31□□□□□ -1.56
SRF1YDL133W YLR042CQ07990 161 aa5.31□□□□□ -1.56
SRF1YDL133W YDL009CQ12210 107 aa5.31□□□□□ -1.56
SRF1YDL133W YOL085CQ99345 113 aa5.31□□□□□ -1.56
SRF1YDL133W TOM1Q03280 3268 aa5.31□□□□□ -1.56
SRF1YDL133W SEN1Q00416 2231 aaKnown RBP5.3□□□□□ -1.56
SRF1YDL133W YGR045CP53229 120 aa5.3□□□□□ -1.56
SRF1YDL133W YGR164WP53291 111 aa5.3□□□□□ -1.56
SRF1YDL133W NRM1P53718 249 aa5.3□□□□□ -1.56
SRF1YDL133W YNL046WP53956 172 aa5.3□□□□□ -1.56
SRF1YDL133W CCW12Q12127 133 aa5.3□□□□□ -1.56
SRF1YDL133W YDR246W-AQ3E763 66 aa5.3□□□□□ -1.56
SRF1YDL133W KSH1Q8TGJ3 72 aa5.3□□□□□ -1.56
SRF1YDL133W BET1P22804 142 aa5.29□□□□□ -1.56
SRF1YDL133W YBR209WP38311 105 aa5.29□□□□□ -1.56
SRF1YDL133W YEL008WP40001 126 aa5.29□□□□□ -1.56
SRF1YDL133W YML122CQ03207 126 aa5.29□□□□□ -1.56
SRF1YDL133W YLR285C-AQ3E771 56 aa5.29□□□□□ -1.56
SRF1YDL133W SED1Q01589 338 aa5.28□□□□□ -1.56
SRF1YDL133W HAL1Q01766 294 aa5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 66.9 ms