RNA–Protein interactions for RNA: YDL033C

SLM3, Transcript of tRNA-specific 2-thiouridylase, yeastyeast

Gene SLM3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLM3YDL033C DYN1P36022 4092 aa6.19□□□□□ -1.42
SLM3YDL033C YCH1P42937 148 aa6.18□□□□□ -1.42
SLM3YDL033C YMR181CQ03231 154 aa6.18□□□□□ -1.42
SLM3YDL033C YLR194CQ05777 254 aa6.18□□□□□ -1.42
SLM3YDL033C TIM22Q12328 207 aa6.18□□□□□ -1.42
SLM3YDL033C VMA11P32842 164 aa6.17□□□□□ -1.42
SLM3YDL033C DSE2P38844 325 aa6.17□□□□□ -1.42
SLM3YDL033C VHS2P40463 436 aa6.17□□□□□ -1.42
SLM3YDL033C YIL059CP40520 121 aa6.17□□□□□ -1.42
SLM3YDL033C MRPL49P40858 161 aaPredicted RBP6.17□□□□□ -1.42
SLM3YDL033C COF1Q03048 143 aaKnown RBP6.17□□□□□ -1.42
SLM3YDL033C FCY1Q12178 158 aa6.17□□□□□ -1.42
SLM3YDL033C YHR213WP0CI67 198 aa6.16□□□□□ -1.42
SLM3YDL033C NRG2P38082 220 aa6.16□□□□□ -1.42
SLM3YDL033C MIC12P38341 106 aa6.16□□□□□ -1.42
SLM3YDL033C PIR5P46999 287 aa6.16□□□□□ -1.42
SLM3YDL033C AIM11P87275 137 aa6.16□□□□□ -1.42
SLM3YDL033C COX12Q01519 83 aa6.16□□□□□ -1.42
SLM3YDL033C RXT3Q07458 294 aa6.16□□□□□ -1.42
SLM3YDL033C YCL048W-AQ2V2Q2 79 aa6.16□□□□□ -1.42
SLM3YDL033C KTI12P34253 313 aaKnown RBP6.15□□□□□ -1.42
SLM3YDL033C YER085CP40058 173 aa6.15□□□□□ -1.42
SLM3YDL033C SPI1P40092 148 aa6.15□□□□□ -1.42
SLM3YDL033C Q0255P03881 472 aa6.14□□□□□ -1.43
SLM3YDL033C RPL39P04650 51 aa6.14□□□□□ -1.43
SLM3YDL033C YDL022C-AP0C5L6 82 aa6.14□□□□□ -1.43
SLM3YDL033C AGA1P32323 725 aa6.14□□□□□ -1.43
SLM3YDL033C VTC1P40046 129 aaRIP-Chip data6.14□□□□□ -1.43not detected
SLM3YDL033C URM1P40554 99 aaPredicted RBP6.14□□□□□ -1.43
SLM3YDL033C LCB3P47013 409 aa6.14□□□□□ -1.43
SLM3YDL033C CAX4P53223 239 aa6.14□□□□□ -1.43
SLM3YDL033C YDR119W-AQ2V2P9 66 aa6.14□□□□□ -1.43
SLM3YDL033C YOR008C-AQ3E7B9 74 aa6.14□□□□□ -1.43
SLM3YDL033C ECM12O13529 151 aa6.13□□□□□ -1.43
SLM3YDL033C YLR415CO13578 112 aa6.13□□□□□ -1.43
SLM3YDL033C RPS8AP0CX39 200 aaKnown RBP6.13□□□□□ -1.43
SLM3YDL033C RPS8BP0CX40 200 aaKnown RBP6.13□□□□□ -1.43
SLM3YDL033C MID2P36027 376 aa6.13□□□□□ -1.43
SLM3YDL033C CTR2P38865 189 aa6.13□□□□□ -1.43
SLM3YDL033C YIA6P40556 373 aa6.13□□□□□ -1.43
SLM3YDL033C IMP2P46972 177 aa6.13□□□□□ -1.43
SLM3YDL033C GLO1P50107 326 aa6.13□□□□□ -1.43
SLM3YDL033C YHR139C-AO13536 103 aa6.12□□□□□ -1.43
SLM3YDL033C YHL042WP38729 150 aa6.12□□□□□ -1.43
SLM3YDL033C SGN1P40561 250 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
SLM3YDL033C MRPL23Q12487 163 aaPredicted RBP6.12□□□□□ -1.43
SLM3YDL033C VPS55P47111 140 aa6.11□□□□□ -1.43
SLM3YDL033C AIM34Q03673 198 aa6.11□□□□□ -1.43
SLM3YDL033C YDR029WQ12111 104 aa6.11□□□□□ -1.43
SLM3YDL033C YCL021W-AQ96VH3 125 aa6.11□□□□□ -1.43
SLM3YDL033C YFL015CP43578 164 aa6.1□□□□□ -1.43
SLM3YDL033C KNH1P50112 268 aa6.1□□□□□ -1.43
SLM3YDL033C RPL42AP0CX27 106 aaKnown RBP6.09□□□□□ -1.43
SLM3YDL033C RPL42BP0CX28 106 aaKnown RBP6.09□□□□□ -1.43
SLM3YDL033C INO2P26798 304 aa6.09□□□□□ -1.43
SLM3YDL033C YER039C-AP0CD97 72 aa6.08□□□□□ -1.44
SLM3YDL033C PBI2P0CT04 75 aaKnown RBP6.08□□□□□ -1.44
SLM3YDL033C SMP1P38128 452 aa6.08□□□□□ -1.44
SLM3YDL033C YMR317WQ04893 1140 aa6.08□□□□□ -1.44
SLM3YDL033C RPL28P02406 149 aaKnown RBP6.07□□□□□ -1.44
SLM3YDL033C ATP15P21306 62 aa6.07□□□□□ -1.44
SLM3YDL033C YKR045CP36138 183 aa6.07□□□□□ -1.44
SLM3YDL033C PEX17P40155 199 aa6.07□□□□□ -1.44
SLM3YDL033C AIM19P40502 157 aa6.07□□□□□ -1.44
SLM3YDL033C YPR053CQ6Q5F3 151 aa6.07□□□□□ -1.44
SLM3YDL033C YMR105W-AQ8TGS8 64 aa6.07□□□□□ -1.44
SLM3YDL033C TOM6P33448 61 aa6.06□□□□□ -1.44
SLM3YDL033C GLE2P40066 365 aa6.06□□□□□ -1.44
SLM3YDL033C YJL027CP47063 138 aaPredicted RBP6.06□□□□□ -1.44
SLM3YDL033C PBA1Q05778 276 aa6.06□□□□□ -1.44
SLM3YDL033C PRM7Q12459 698 aa6.06□□□□□ -1.44
SLM3YDL033C YDR381C-AQ3E6R5 114 aa6.06□□□□□ -1.44
SLM3YDL033C YPL038W-AQ3E7B4 63 aa6.06□□□□□ -1.44
SLM3YDL033C RPL18AP0CX49 186 aaKnown RBP6.05□□□□□ -1.44
SLM3YDL033C RPL18BP0CX50 186 aaKnown RBP6.05□□□□□ -1.44
SLM3YDL033C UBC5P15732 148 aa6.05□□□□□ -1.44
SLM3YDL033C IES6P32617 166 aa6.05□□□□□ -1.44
SLM3YDL033C SHH4Q06236 168 aa6.05□□□□□ -1.44
SLM3YDL033C IRC23Q08416 157 aa6.05□□□□□ -1.44
SLM3YDL033C YDL009CQ12210 107 aa6.05□□□□□ -1.44
SLM3YDL033C YOR029WQ12243 111 aa6.05□□□□□ -1.44
SLM3YDL033C EMC6Q12431 108 aa6.05□□□□□ -1.44
SLM3YDL033C YBR121C-AP0C5L4 52 aa6.04□□□□□ -1.44
SLM3YDL033C MRPL38P35996 138 aaPredicted RBP6.03□□□□□ -1.44
SLM3YDL033C DCV1P43595 202 aa6.03□□□□□ -1.44
SLM3YDL033C YOL160WQ08321 113 aa6.03□□□□□ -1.44
SLM3YDL033C ADH5P38113 351 aaKnown RBP6.02□□□□□ -1.45
SLM3YDL033C HUR1P45820 110 aa6.02□□□□□ -1.45
SLM3YDL033C SBH1P52870 82 aa6.02□□□□□ -1.45
SLM3YDL033C MRPS12P53732 153 aa6.02□□□□□ -1.45
SLM3YDL033C YNL190WP53872 204 aa6.02□□□□□ -1.45
SLM3YDL033C SRL1Q08673 210 aa6.02□□□□□ -1.45
SLM3YDL033C MPC2P38857 129 aa6.01□□□□□ -1.45
SLM3YDL033C YGR219WP53307 113 aa6.01□□□□□ -1.45
SLM3YDL033C RPL2AP0CX45 254 aaKnown RBP6□□□□□ -1.45
SLM3YDL033C RPL2BP0CX46 254 aaKnown RBP6□□□□□ -1.45
SLM3YDL033C POR2P40478 281 aa6□□□□□ -1.45
SLM3YDL033C KEG1P43614 200 aa6□□□□□ -1.45
SLM3YDL033C TRP1P00912 224 aa5.99□□□□□ -1.45
SLM3YDL033C YSY6P38374 65 aa5.99□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 59.8 ms