RNA–Protein interactions for RNA: YDL004W

ATP16, Transcript of Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, yeast

Gene ATP16, Length 483 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP16	YDL004W	SNA2	P56508	79 aa		0.93	□□□□□ -2.26
ATP16	YDL004W	COX12	Q01519	83 aa		0.93	□□□□□ -2.26
ATP16	YDL004W	LSM6	Q06406	86 aa	Known RBP	0.93	□□□□□ -2.26
ATP16	YDL004W	PRM3	Q08931	133 aa		0.93	□□□□□ -2.26
ATP16	YDL004W	YDR029W	Q12111	104 aa		0.93	□□□□□ -2.26
ATP16	YDL004W	MHF2	Q3E829	80 aa		0.93	□□□□□ -2.26
ATP16	YDL004W	KSH1	Q8TGJ3	72 aa		0.93	□□□□□ -2.26
ATP16	YDL004W	ENV10	Q99382	181 aa		0.93	□□□□□ -2.26
ATP16	YDL004W	BNI1	P41832	1953 aa		0.93	□□□□□ -2.26
ATP16	YDL004W	TY4B-J	P47024	1803 aa		0.93	□□□□□ -2.26
ATP16	YDL004W	GSC2	P40989	1895 aa		0.92	□□□□□ -2.26
ATP16	YDL004W	NHP2	P32495	156 aa	Predicted RBP	0.92	□□□□□ -2.26
ATP16	YDL004W	COX23	P38824	151 aa		0.92	□□□□□ -2.26
ATP16	YDL004W	PAU12	P53343	120 aa		0.92	□□□□□ -2.26
ATP16	YDL004W	YGR240C-A	Q3E786	66 aa		0.92	□□□□□ -2.26
ATP16	YDL004W	YKL068W-A	Q3E826	78 aa		0.92	□□□□□ -2.26
ATP16	YDL004W	DNA2	P38859	1522 aa		0.92	□□□□□ -2.26
ATP16	YDL004W	SWR1	Q05471	1514 aa		0.91	□□□□□ -2.26
ATP16	YDL004W	HMRA1	P0CY11	126 aa		0.91	□□□□□ -2.26
ATP16	YDL004W	HMRA2	P0CY13	119 aa		0.91	□□□□□ -2.26
ATP16	YDL004W	PAU16	P35994	123 aa		0.91	□□□□□ -2.26
ATP16	YDL004W	RSM18	P40033	138 aa		0.91	□□□□□ -2.26
ATP16	YDL004W	YIR020C	P40575	100 aa		0.91	□□□□□ -2.26
ATP16	YDL004W	PAU15	P40585	124 aa		0.91	□□□□□ -2.26
ATP16	YDL004W	IMP2	P46972	177 aa		0.91	□□□□□ -2.26
ATP16	YDL004W	VPS55	P47111	140 aa		0.91	□□□□□ -2.26
ATP16	YDL004W	MYO1	P08964	1928 aa		0.91	□□□□□ -2.26
ATP16	YDL004W	RPA190	P10964	1664 aa	Known RBP	0.91	□□□□□ -2.26
ATP16	YDL004W	PAU2	P32612	120 aa		0.9	□□□□□ -2.27
ATP16	YDL004W	AIM19	P40502	157 aa		0.9	□□□□□ -2.27
ATP16	YDL004W	MVB12	P42939	101 aa		0.9	□□□□□ -2.27
ATP16	YDL004W	MIC27	P50945	234 aa		0.9	□□□□□ -2.27
ATP16	YDL004W	YLR285C-A	Q3E771	56 aa		0.9	□□□□□ -2.27
ATP16	YDL004W	YCR095W-A	Q3E787	52 aa		0.9	□□□□□ -2.27
ATP16	YDL004W	BPT1	P14772	1559 aa		0.9	□□□□□ -2.27
ATP16	YDL004W	PDR10	P51533	1564 aa		0.9	□□□□□ -2.27
ATP16	YDL004W	ESC1	Q03661	1658 aa	Known RBP	0.9	□□□□□ -2.27
ATP16	YDL004W	SRB8	P25648	1427 aa		0.89	□□□□□ -2.27
ATP16	YDL004W	NTE1	Q04958	1679 aa		0.89	□□□□□ -2.27
ATP16	YDL004W	ROX3	P25046	220 aa		0.89	□□□□□ -2.27
ATP16	YDL004W	PAU24	P38155	120 aa		0.89	□□□□□ -2.27
ATP16	YDL004W	YBR013C	P38215	129 aa		0.89	□□□□□ -2.27
ATP16	YDL004W	YBR292C	P38357	123 aa		0.89	□□□□□ -2.27
ATP16	YDL004W	COX19	Q3E731	98 aa		0.89	□□□□□ -2.27
ATP16	YDL004W	YPL038W-A	Q3E7B4	63 aa		0.89	□□□□□ -2.27
ATP16	YDL004W	ESP1	Q03018	1630 aa		0.89	□□□□□ -2.27
ATP16	YDL004W	CCW14	O13547	238 aa		0.88	□□□□□ -2.27
ATP16	YDL004W	AIM4	P38305	123 aa	Predicted RBP	0.88	□□□□□ -2.27
ATP16	YDL004W	YMR141C	P40211	102 aa		0.88	□□□□□ -2.27
ATP16	YDL004W	YDR042C	Q03205	200 aa		0.88	□□□□□ -2.27
ATP16	YDL004W	YMR082C	Q04276	118 aa		0.88	□□□□□ -2.27
ATP16	YDL004W	YGL194C-A	Q2V2P6	80 aa		0.88	□□□□□ -2.27
ATP16	YDL004W	RPA12	P32529	125 aa	Known RBP	0.87	□□□□□ -2.27
ATP16	YDL004W	SCP1	Q08873	200 aa		0.87	□□□□□ -2.27
ATP16	YDL004W	HUG1	Q6Q5K6	68 aa		0.87	□□□□□ -2.27
ATP16	YDL004W	GDB1	Q06625	1536 aa		0.86	□□□□□ -2.27
ATP16	YDL004W	PAU1	P0CE88	120 aa		0.86	□□□□□ -2.27
ATP16	YDL004W	PAU14	P0CE89	120 aa		0.86	□□□□□ -2.27
ATP16	YDL004W	PAU6	P0CE90	120 aa		0.86	□□□□□ -2.27
ATP16	YDL004W	PAU18	P0CE91	120 aa		0.86	□□□□□ -2.27
ATP16	YDL004W	PAU8	P0CE92	120 aa		0.86	□□□□□ -2.27
ATP16	YDL004W	PAU11	P0CE93	120 aa		0.86	□□□□□ -2.27
ATP16	YDL004W	TOM6	P33448	61 aa		0.86	□□□□□ -2.27
ATP16	YDL004W	PAU13	P38725	120 aa		0.86	□□□□□ -2.27
ATP16	YDL004W	YIL086C	P40503	102 aa		0.86	□□□□□ -2.27
ATP16	YDL004W	PAU4	P53427	120 aa		0.86	□□□□□ -2.27
ATP16	YDL004W	MRX7	P53869	86 aa		0.86	□□□□□ -2.27
ATP16	YDL004W	PAU10	Q03050	120 aa		0.86	□□□□□ -2.27
ATP16	YDL004W	ICY1	Q04329	127 aa		0.86	□□□□□ -2.27
ATP16	YDL004W	PAU20	Q08322	120 aa		0.86	□□□□□ -2.27
ATP16	YDL004W	YKL065W-A	Q2V2P2	73 aa		0.86	□□□□□ -2.27
ATP16	YDL004W	PAU9	Q3E770	120 aa		0.86	□□□□□ -2.27
ATP16	YDL004W	YCR085W	P25650	117 aa		0.85	□□□□□ -2.27
ATP16	YDL004W	MPC2	P38857	129 aa		0.85	□□□□□ -2.27
ATP16	YDL004W	PAU5	P43575	122 aa		0.85	□□□□□ -2.27
ATP16	YDL004W	YJR128W	P47162	119 aa		0.85	□□□□□ -2.27
ATP16	YDL004W	BSC4	P53841	131 aa		0.85	□□□□□ -2.27
ATP16	YDL004W	MLP1	Q02455	1875 aa	Known RBP	0.85	□□□□□ -2.27
ATP16	YDL004W	YOR343C	Q12484	108 aa		0.85	□□□□□ -2.27
ATP16	YDL004W	BRR2	P32639	2163 aa	Known RBP	0.84	□□□□□ -2.27
ATP16	YDL004W	LAA1	P39526	2014 aa		0.84	□□□□□ -2.27
ATP16	YDL004W	SHU1	P38751	150 aa		0.84	□□□□□ -2.27
ATP16	YDL004W	YBR072C-A	Q3E794	53 aa		0.84	□□□□□ -2.27
ATP16	YDL004W	MMS22	Q06164	1454 aa		0.84	□□□□□ -2.28
ATP16	YDL004W	YBL071C	P38185	102 aa		0.83	□□□□□ -2.28
ATP16	YDL004W	SPC1	P46965	94 aa		0.83	□□□□□ -2.28
ATP16	YDL004W	URB1	P34241	1764 aa	Known RBP	0.83	□□□□□ -2.28
ATP16	YDL004W	TY4B-H	P0C2J7	1802 aa		0.82	□□□□□ -2.28
ATP16	YDL004W	YLR255C	O13574	117 aa		0.82	□□□□□ -2.28
ATP16	YDL004W	RPL43A	P0CX25	92 aa	Known RBP	0.82	□□□□□ -2.28
ATP16	YDL004W	RPL43B	P0CX26	92 aa		0.82	□□□□□ -2.28
ATP16	YDL004W	YHR214C-D	P0CX93	97 aa		0.82	□□□□□ -2.28
ATP16	YDL004W	CWP2	P43497	92 aa		0.82	□□□□□ -2.28
ATP16	YDL004W	YOR105W	Q08504	108 aa		0.82	□□□□□ -2.28
ATP16	YDL004W	YMR175W-A	Q3E766	64 aa		0.82	□□□□□ -2.28
ATP16	YDL004W	YOL097W-A	Q3E7Y9	61 aa		0.82	□□□□□ -2.28
ATP16	YDL004W	RRT15	Q3E811	62 aa		0.82	□□□□□ -2.28
ATP16	YDL004W	YHR213W-A	Q8TGT4	77 aa		0.82	□□□□□ -2.28
ATP16	YDL004W	YRF1-1	P0CX20	1796 aa		0.82	□□□□□ -2.28
ATP16	YDL004W	YRF1-5	P0CX21	1796 aa		0.82	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms