RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W YNL190WP53872 204 aa3.69□□□□□ -1.82
VHC1YBR235W SMD1Q02260 146 aaPredicted RBP3.69□□□□□ -1.82
VHC1YBR235W TIM22Q12328 207 aa3.69□□□□□ -1.82
VHC1YBR235W OST1P41543 476 aaKnown RBP3.68□□□□□ -1.82
VHC1YBR235W RPS8AP0CX39 200 aaKnown RBP3.68□□□□□ -1.82
VHC1YBR235W RPS8BP0CX40 200 aaKnown RBP3.68□□□□□ -1.82
VHC1YBR235W PAU7P39545 55 aa3.68□□□□□ -1.82
VHC1YBR235W YMR141CP40211 102 aa3.68□□□□□ -1.82
VHC1YBR235W GLO1P50107 326 aa3.68□□□□□ -1.82
VHC1YBR235W AIR2Q12476 344 aaKnown RBP3.68□□□□□ -1.82
VHC1YBR235W FAS1P07149 2051 aaKnown RBP3.68□□□□□ -1.82
VHC1YBR235W YHR213WP0CI67 198 aa3.68□□□□□ -1.82
VHC1YBR235W YHR173CP38864 112 aa3.68□□□□□ -1.82
VHC1YBR235W RPS14BP39516 138 aaKnown RBP3.68□□□□□ -1.82
VHC1YBR235W ATP19P81451 68 aa3.68□□□□□ -1.82
VHC1YBR235W PFY1P07274 126 aa3.67□□□□□ -1.82
VHC1YBR235W ARF2P19146 181 aaKnown RBP3.67□□□□□ -1.82
VHC1YBR235W ECO1P43605 281 aa3.67□□□□□ -1.82
VHC1YBR235W SPT4P32914 102 aaPredicted RBP3.67□□□□□ -1.82
VHC1YBR235W NCA3P46955 337 aa3.67□□□□□ -1.82
VHC1YBR235W EDC1P53080 175 aaPredicted RBP3.67□□□□□ -1.82
VHC1YBR235W YLR112WQ12130 139 aa3.67□□□□□ -1.82
VHC1YBR235W ICS3P47034 131 aa3.66□□□□□ -1.82
VHC1YBR235W YML122CQ03207 126 aa3.66□□□□□ -1.82
VHC1YBR235W PBP4Q07362 185 aaKnown RBP3.66□□□□□ -1.82
VHC1YBR235W MTC6P38849 526 aa3.66□□□□□ -1.82
VHC1YBR235W ERI1P62651 68 aaKnown RBP3.66□□□□□ -1.82
VHC1YBR235W HSP12P22943 109 aaKnown RBP3.66□□□□□ -1.82
VHC1YBR235W YMR295CQ03559 197 aa3.66□□□□□ -1.82
VHC1YBR235W FIT2Q08906 153 aa3.66□□□□□ -1.82
VHC1YBR235W YLR285C-AQ3E771 56 aa3.66□□□□□ -1.82
VHC1YBR235W FLO9P39712 1322 aa3.65□□□□□ -1.83
VHC1YBR235W RTG1P32607 177 aa3.65□□□□□ -1.83
VHC1YBR235W DAD4P69851 72 aa3.65□□□□□ -1.83
VHC1YBR235W SHH4Q06236 168 aa3.65□□□□□ -1.83
VHC1YBR235W YDR246W-AQ3E763 66 aa3.65□□□□□ -1.83
VHC1YBR235W YIL029CP40538 142 aa3.65□□□□□ -1.83
VHC1YBR235W YMR181CQ03231 154 aa3.65□□□□□ -1.83
VHC1YBR235W YOL029CQ08187 201 aa3.65□□□□□ -1.83
VHC1YBR235W SPS100P13130 326 aa3.64□□□□□ -1.83
VHC1YBR235W YLR012CQ07927 99 aa3.64□□□□□ -1.83
VHC1YBR235W UBC13P52490 153 aa3.64□□□□□ -1.83
VHC1YBR235W YOR381W-AQ3E804 55 aa3.64□□□□□ -1.83
VHC1YBR235W AGA1P32323 725 aa3.63□□□□□ -1.83
VHC1YBR235W AIM4P38305 123 aaPredicted RBP3.63□□□□□ -1.83
VHC1YBR235W YDR274CP87283 123 aa3.63□□□□□ -1.83
VHC1YBR235W PPT2Q12036 173 aa3.63□□□□□ -1.83
VHC1YBR235W FHN1P53279 174 aa3.63□□□□□ -1.83
VHC1YBR235W NCE102Q12207 173 aaRIP-Chip data3.63□□□□□ -1.83not detected
VHC1YBR235W SEC16P48415 2195 aaKnown RBP3.63□□□□□ -1.83
VHC1YBR235W YLR156WP0CE96 114 aa3.62□□□□□ -1.83
VHC1YBR235W YLR159WP0CE97 114 aa3.62□□□□□ -1.83
VHC1YBR235W YLR161WP0CE98 114 aa3.62□□□□□ -1.83
VHC1YBR235W YLR194CQ05777 254 aa3.62□□□□□ -1.83
VHC1YBR235W VPS68Q12016 184 aa3.62□□□□□ -1.83
VHC1YBR235W ACC1Q00955 2233 aaKnown RBP3.62□□□□□ -1.83
VHC1YBR235W YHR214C-DP0CX93 97 aa3.62□□□□□ -1.83
VHC1YBR235W YOR343CQ12484 108 aa3.62□□□□□ -1.83
VHC1YBR235W COA3Q3E7B2 85 aa3.62□□□□□ -1.83
VHC1YBR235W RPL26AP05743 127 aaKnown RBP3.62□□□□□ -1.83
VHC1YBR235W YLR111WQ12528 110 aa3.62□□□□□ -1.83
VHC1YBR235W ARF1P11076 181 aaKnown RBP3.61□□□□□ -1.83
VHC1YBR235W YAL064WP39711 94 aa3.61□□□□□ -1.83
VHC1YBR235W YFR035CP43608 114 aa3.61□□□□□ -1.83
VHC1YBR235W YOR034C-AQ3E735 80 aa3.61□□□□□ -1.83
VHC1YBR235W MPC2P38857 129 aa3.61□□□□□ -1.83
VHC1YBR235W RPL15AP05748 204 aaKnown RBP3.6□□□□□ -1.83
VHC1YBR235W RPB9P27999 122 aa3.6□□□□□ -1.83
VHC1YBR235W TDA2P40045 126 aa3.6□□□□□ -1.83
VHC1YBR235W PEX17P40155 199 aa3.6□□□□□ -1.83
VHC1YBR235W PGU1P47180 361 aa3.6□□□□□ -1.83
VHC1YBR235W ATP15P21306 62 aa3.6□□□□□ -1.83
VHC1YBR235W YKR045CP36138 183 aa3.6□□□□□ -1.83
VHC1YBR235W RSM18P40033 138 aa3.6□□□□□ -1.83
VHC1YBR235W ATP20Q12233 115 aa3.6□□□□□ -1.83
VHC1YBR235W SEN1Q00416 2231 aaKnown RBP3.6□□□□□ -1.83
VHC1YBR235W MDM35O60200 86 aa3.59□□□□□ -1.83
VHC1YBR235W KRE9P39005 276 aa3.59□□□□□ -1.83
VHC1YBR235W DCV1P43595 202 aa3.59□□□□□ -1.83
VHC1YBR235W YEL045CP32616 141 aa3.58□□□□□ -1.84
VHC1YBR235W IMP2P46972 177 aa3.58□□□□□ -1.84
VHC1YBR235W RPL26BP53221 127 aaKnown RBP3.58□□□□□ -1.84
VHC1YBR235W COX17Q12287 69 aa3.58□□□□□ -1.84
VHC1YBR235W YHR022CP38763 256 aa3.58□□□□□ -1.84
VHC1YBR235W HUR1P45820 110 aa3.58□□□□□ -1.84
VHC1YBR235W LDB16P25587 256 aa3.57□□□□□ -1.84
VHC1YBR235W MGR2Q02889 113 aa3.57□□□□□ -1.84
VHC1YBR235W YOL160WQ08321 113 aa3.57□□□□□ -1.84
VHC1YBR235W DDR48P18899 430 aaKnown RBP3.57□□□□□ -1.84
VHC1YBR235W TVP23P38962 199 aa3.57□□□□□ -1.84
VHC1YBR235W SPI1P40092 148 aa3.57□□□□□ -1.84
VHC1YBR235W YDL009CQ12210 107 aa3.57□□□□□ -1.84
VHC1YBR235W CRC1Q12289 327 aa3.57□□□□□ -1.84
VHC1YBR235W MIG3P39943 394 aa3.56□□□□□ -1.84
VHC1YBR235W PCP1P53259 346 aa3.56□□□□□ -1.84
VHC1YBR235W YHR214C-EQ8TGK0 99 aa3.56□□□□□ -1.84
VHC1YBR235W YML100W-AQ8TGT0 57 aa3.56□□□□□ -1.84
VHC1YBR235W POL2P21951 2222 aaKnown RBP3.56□□□□□ -1.84
VHC1YBR235W RPB10P22139 70 aa3.56□□□□□ -1.84
VHC1YBR235W SED1Q01589 338 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms