RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W BUD4P47136 1447 aa0.88□□□□□ -2.27
SNC1YAL030W YLR419WQ06698 1435 aaKnown RBP0.88□□□□□ -2.27
SNC1YAL030W NTE1Q04958 1679 aa0.88□□□□□ -2.27
SNC1YAL030W KRE5P22023 1365 aa0.87□□□□□ -2.27
SNC1YAL030W YBR090CP38253 122 aa0.87□□□□□ -2.27
SNC1YAL030W YCL048W-AQ2V2Q2 79 aa0.87□□□□□ -2.27
SNC1YAL030W YOS1Q3E834 85 aa0.87□□□□□ -2.27
SNC1YAL030W MIC10Q96VH5 97 aa0.87□□□□□ -2.27
SNC1YAL030W YJR128WP47162 119 aa0.86□□□□□ -2.27
SNC1YAL030W ZEO1Q08245 113 aa0.86□□□□□ -2.27
SNC1YAL030W YOL118CQ08259 102 aa0.86□□□□□ -2.27
SNC1YAL030W YPL225WQ08971 146 aaKnown RBP0.86□□□□□ -2.27
SNC1YAL030W YOR034C-AQ3E735 80 aa0.86□□□□□ -2.27
SNC1YAL030W GEA1P47102 1408 aaPredicted RBP0.86□□□□□ -2.27
SNC1YAL030W GEA2P39993 1459 aaKnown RBP0.86□□□□□ -2.27
SNC1YAL030W TY1B-BRQ12193 1756 aa0.85□□□□□ -2.27
SNC1YAL030W REV3P14284 1504 aa0.85□□□□□ -2.27
SNC1YAL030W UBC4P15731 148 aa0.85□□□□□ -2.27
SNC1YAL030W YCR101CP25607 182 aa0.85□□□□□ -2.27
SNC1YAL030W IMP2P46972 177 aa0.85□□□□□ -2.27
SNC1YAL030W LCL1Q02786 101 aa0.85□□□□□ -2.27
SNC1YAL030W RIM15P43565 1770 aa0.85□□□□□ -2.27
SNC1YAL030W BRR2P32639 2163 aaKnown RBP0.84□□□□□ -2.27
SNC1YAL030W UBC5P15732 148 aa0.84□□□□□ -2.27
SNC1YAL030W MRPS12P53732 153 aa0.84□□□□□ -2.27
SNC1YAL030W BPT1P14772 1559 aa0.83□□□□□ -2.28
SNC1YAL030W TY1B-BLQ12490 1755 aa0.83□□□□□ -2.28
SNC1YAL030W CAT8P39113 1433 aa0.83□□□□□ -2.28
SNC1YAL030W YRF1-2P40105 1681 aa0.83□□□□□ -2.28
SNC1YAL030W MOT1P32333 1867 aa0.82□□□□□ -2.28
SNC1YAL030W ECM29P38737 1868 aa0.82□□□□□ -2.28
SNC1YAL030W BLM10P43583 2143 aa0.82□□□□□ -2.28
SNC1YAL030W RSM19P53733 91 aaPredicted RBP0.82□□□□□ -2.28
SNC1YAL030W SNA2P56508 79 aa0.82□□□□□ -2.28
SNC1YAL030W YCR095W-AQ3E787 52 aa0.82□□□□□ -2.28
SNC1YAL030W YPL038W-AQ3E7B4 63 aa0.82□□□□□ -2.28
SNC1YAL030W URA2P07259 2214 aaKnown RBP0.82□□□□□ -2.28
SNC1YAL030W TOP2P06786 1428 aaKnown RBP0.81□□□□□ -2.28
SNC1YAL030W YLR157W-EP0CF00 54 aa0.81□□□□□ -2.28
SNC1YAL030W MIX14Q04341 121 aa0.81□□□□□ -2.28
SNC1YAL030W YLR307C-AQ3E825 87 aa0.81□□□□□ -2.28
SNC1YAL030W POL2P21951 2222 aaKnown RBP0.8□□□□□ -2.28
SNC1YAL030W CCW14O13547 238 aa0.8□□□□□ -2.28
SNC1YAL030W YIL086CP40503 102 aa0.8□□□□□ -2.28
SNC1YAL030W KSH1Q8TGJ3 72 aa0.8□□□□□ -2.28
SNC1YAL030W TY1B-DR6P0C2I3 1755 aa0.8□□□□□ -2.28
SNC1YAL030W TY1B-LR2P0C2I5 1755 aa0.8□□□□□ -2.28
SNC1YAL030W TY1B-PR2P0C2J0 1756 aa0.8□□□□□ -2.28
SNC1YAL030W TY1B-PR3P0C2J1 1755 aaKnown RBP0.8□□□□□ -2.28
SNC1YAL030W TY1B-JR2P47100 1755 aaKnown RBP0.8□□□□□ -2.28
SNC1YAL030W TY1B-MR1Q04214 1755 aa0.8□□□□□ -2.28
SNC1YAL030W TY1B-MR2Q04670 1755 aaKnown RBP0.8□□□□□ -2.28
SNC1YAL030W TY1B-NL1Q12112 1755 aa0.8□□□□□ -2.28
SNC1YAL030W TY1B-GR1Q12141 1755 aa0.8□□□□□ -2.28
SNC1YAL030W TY1B-GR3Q12316 1755 aa0.8□□□□□ -2.28
SNC1YAL030W TY1B-PLQ12414 1755 aaKnown RBP0.8□□□□□ -2.28
SNC1YAL030W TY1B-ORQ92393 1755 aa0.8□□□□□ -2.28
SNC1YAL030W ESC1Q03661 1658 aaKnown RBP0.79□□□□□ -2.28
SNC1YAL030W YHR173CP38864 112 aa0.79□□□□□ -2.28
SNC1YAL030W EMC5P40540 141 aa0.79□□□□□ -2.28
SNC1YAL030W PAU5P43575 122 aa0.79□□□□□ -2.28
SNC1YAL030W COX12Q01519 83 aa0.79□□□□□ -2.28
SNC1YAL030W YOR289WQ12012 251 aaPredicted RBP0.79□□□□□ -2.28
SNC1YAL030W SNF2P22082 1703 aa0.78□□□□□ -2.28
SNC1YAL030W TY1B-LR3P0C2I6 1755 aaKnown RBP0.78□□□□□ -2.28
SNC1YAL030W ROX3P25046 220 aa0.78□□□□□ -2.28
SNC1YAL030W SHU1P38751 150 aa0.78□□□□□ -2.28
SNC1YAL030W MRX7P53869 86 aa0.78□□□□□ -2.28
SNC1YAL030W RSF2P46974 1380 aa0.78□□□□□ -2.28
SNC1YAL030W SRB8P25648 1427 aa0.78□□□□□ -2.28
SNC1YAL030W MLP1Q02455 1875 aaKnown RBP0.78□□□□□ -2.29
SNC1YAL030W PAU6P0CE90 120 aa0.77□□□□□ -2.29
SNC1YAL030W PAU18P0CE91 120 aa0.77□□□□□ -2.29
SNC1YAL030W HMRA1P0CY11 126 aa0.77□□□□□ -2.29
SNC1YAL030W MRP17P28778 131 aa0.77□□□□□ -2.29
SNC1YAL030W GCV3P39726 170 aaPredicted RBP0.77□□□□□ -2.29
SNC1YAL030W MSL1P40567 111 aaPredicted RBP0.77□□□□□ -2.29
SNC1YAL030W YBR072C-AQ3E794 53 aa0.77□□□□□ -2.29
SNC1YAL030W SWR1Q05471 1514 aa0.77□□□□□ -2.29
SNC1YAL030W PDR10P51533 1564 aa0.76□□□□□ -2.29
SNC1YAL030W YLR255CO13574 117 aa0.76□□□□□ -2.29
SNC1YAL030W YBL071CP38185 102 aa0.76□□□□□ -2.29
SNC1YAL030W YHL005CP38752 130 aa0.76□□□□□ -2.29
SNC1YAL030W MPC2P38857 129 aa0.76□□□□□ -2.29
SNC1YAL030W YDR210WQ03482 75 aa0.76□□□□□ -2.29
SNC1YAL030W PAU20Q08322 120 aa0.76□□□□□ -2.29
SNC1YAL030W AUA1P32450 94 aa0.75□□□□□ -2.29
SNC1YAL030W ICY1Q04329 127 aa0.75□□□□□ -2.29
SNC1YAL030W SUS1Q6WNK7 96 aa0.75□□□□□ -2.29
SNC1YAL030W SSN2P38931 1420 aa0.74□□□□□ -2.29
SNC1YAL030W PAU1P0CE88 120 aa0.74□□□□□ -2.29
SNC1YAL030W PAU14P0CE89 120 aa0.74□□□□□ -2.29
SNC1YAL030W PAU8P0CE92 120 aa0.74□□□□□ -2.29
SNC1YAL030W PAU11P0CE93 120 aa0.74□□□□□ -2.29
SNC1YAL030W PAU13P38725 120 aa0.74□□□□□ -2.29
SNC1YAL030W SPC1P46965 94 aa0.74□□□□□ -2.29
SNC1YAL030W PAU10Q03050 120 aa0.74□□□□□ -2.29
SNC1YAL030W YDR029WQ12111 104 aa0.74□□□□□ -2.29
SNC1YAL030W YDR010CQ12426 110 aa0.74□□□□□ -2.29
SNC1YAL030W COX19Q3E731 98 aa0.74□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms