RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C UBC12P52491 188 aa5.11□□□□□ -1.59
UME1YPL139C BRP1P53194 125 aa5.11□□□□□ -1.59
UME1YPL139C ATP19P81451 68 aa5.11□□□□□ -1.59
UME1YPL139C GSP1P32835 219 aaKnown RBP5.1□□□□□ -1.59
UME1YPL139C GSP2P32836 220 aaKnown RBP5.1□□□□□ -1.59
UME1YPL139C ELF1P36053 145 aa5.1□□□□□ -1.59
UME1YPL139C BNS1P50084 137 aa5.1□□□□□ -1.59
UME1YPL139C POM33Q12164 279 aa5.1□□□□□ -1.59
UME1YPL139C RPL28P02406 149 aaKnown RBP5.09□□□□□ -1.59
UME1YPL139C CUP2P15315 225 aa5.09□□□□□ -1.59
UME1YPL139C SDH8P38345 138 aa5.09□□□□□ -1.59
UME1YPL139C YNL217WP40152 326 aa5.09□□□□□ -1.59
UME1YPL139C ABF2Q02486 183 aa5.09□□□□□ -1.59
UME1YPL139C NAT3Q06504 195 aa5.09□□□□□ -1.59
UME1YPL139C DCN1Q12395 269 aa5.09□□□□□ -1.59
UME1YPL139C RPL12AP0CX53 165 aaKnown RBP5.08□□□□□ -1.6
UME1YPL139C RPL12BP0CX54 165 aa5.08□□□□□ -1.6
UME1YPL139C TIR1P10863 254 aa5.08□□□□□ -1.6
UME1YPL139C YCR023CP25351 611 aa5.08□□□□□ -1.6
UME1YPL139C OXA1P39952 402 aa5.08□□□□□ -1.6
UME1YPL139C PHS1P40857 217 aa5.08□□□□□ -1.6
UME1YPL139C YDR366CP87287 132 aa5.08□□□□□ -1.6
UME1YPL139C YLL066W-BQ8TGJ7 56 aa5.08□□□□□ -1.6
UME1YPL139C POF1P25576 258 aa5.07□□□□□ -1.6
UME1YPL139C GAT4P40569 121 aa5.07□□□□□ -1.6
UME1YPL139C KEG1P43614 200 aa5.07□□□□□ -1.6
UME1YPL139C MMS2P53152 137 aa5.07□□□□□ -1.6
UME1YPL139C YGR017WP53210 297 aa5.07□□□□□ -1.6
UME1YPL139C AIM34Q03673 198 aa5.07□□□□□ -1.6
UME1YPL139C YLR042CQ07990 161 aa5.07□□□□□ -1.6
UME1YPL139C TIM22Q12328 207 aa5.07□□□□□ -1.6
UME1YPL139C YCR075W-AQ3E830 75 aa5.07□□□□□ -1.6
UME1YPL139C PCC1Q3E833 88 aa5.07□□□□□ -1.6
UME1YPL139C YCL001W-BQ96VH2 84 aa5.07□□□□□ -1.6
UME1YPL139C MRPL31P14063 131 aaPredicted RBP5.06□□□□□ -1.6
UME1YPL139C RUB1Q03919 77 aa5.06□□□□□ -1.6
UME1YPL139C ARC18Q05933 178 aaKnown RBP5.06□□□□□ -1.6
UME1YPL139C YOR105WQ08504 108 aa5.06□□□□□ -1.6
UME1YPL139C MRPL28P36527 147 aa5.05□□□□□ -1.6
UME1YPL139C YGR026WP53217 278 aa5.05□□□□□ -1.6
UME1YPL139C FYV7Q12247 151 aa5.05□□□□□ -1.6
UME1YPL139C CRC1Q12289 327 aa5.05□□□□□ -1.6
UME1YPL139C UTP23Q12339 254 aaKnown RBP5.05□□□□□ -1.6
UME1YPL139C YGR240C-AQ3E786 66 aa5.05□□□□□ -1.6
UME1YPL139C LAC1P28496 418 aa5.04□□□□□ -1.6
UME1YPL139C QRI5P32344 111 aa5.04□□□□□ -1.6
UME1YPL139C IRC22P40006 225 aa5.04□□□□□ -1.6
UME1YPL139C YER076CP40049 302 aa5.04□□□□□ -1.6
UME1YPL139C GIS2P53849 153 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
UME1YPL139C ARL3Q02804 198 aa5.04□□□□□ -1.6
UME1YPL139C DPP1Q05521 289 aa5.04□□□□□ -1.6
UME1YPL139C YLR050CQ12155 161 aaKnown RBP5.04□□□□□ -1.6
UME1YPL139C NTF2P33331 125 aaKnown RBP5.04□□□□□ -1.6
UME1YPL139C YCH1P42937 148 aa5.04□□□□□ -1.6
UME1YPL139C DAD3P69850 94 aa5.04□□□□□ -1.6
UME1YPL139C DGA1Q08650 418 aa5.04□□□□□ -1.6
UME1YPL139C PAM17P36147 197 aa5.03□□□□□ -1.6
UME1YPL139C MIX23P38162 196 aa5.03□□□□□ -1.6
UME1YPL139C RPB11P38902 120 aa5.03□□□□□ -1.6
UME1YPL139C YIL024CP40543 189 aa5.03□□□□□ -1.6
UME1YPL139C UBC11P52492 156 aa5.03□□□□□ -1.6
UME1YPL139C PBA1Q05778 276 aa5.03□□□□□ -1.6
UME1YPL139C SMT3Q12306 101 aaKnown RBP5.03□□□□□ -1.6
UME1YPL139C FMP49A0A023PZB3 126 aa5.02□□□□□ -1.61
UME1YPL139C LDS1P31379 325 aa5.02□□□□□ -1.61
UME1YPL139C UPS3Q04006 179 aa5.02□□□□□ -1.61
UME1YPL139C YOR304C-AO14468 76 aa5.01□□□□□ -1.61
UME1YPL139C SEC59P20048 519 aa5.01□□□□□ -1.61
UME1YPL139C YKR041WP36134 250 aa5.01□□□□□ -1.61
UME1YPL139C CWC27Q02770 301 aa5.01□□□□□ -1.61
UME1YPL139C SNU23Q12368 194 aaPredicted RBP5.01□□□□□ -1.61
UME1YPL139C SRB6P32570 121 aa5□□□□□ -1.61
UME1YPL139C ZRT1P32804 376 aa5□□□□□ -1.61
UME1YPL139C KTI12P34253 313 aaKnown RBP5□□□□□ -1.61
UME1YPL139C LCL2Q08045 131 aa5□□□□□ -1.61
UME1YPL139C YGL010WP25338 174 aa4.99□□□□□ -1.61
UME1YPL139C YKR032WP36127 104 aa4.99□□□□□ -1.61
UME1YPL139C GPI19Q04082 140 aa4.99□□□□□ -1.61
UME1YPL139C MHR1Q06630 226 aa4.99□□□□□ -1.61
UME1YPL139C ATP16Q12165 160 aa4.99□□□□□ -1.61
UME1YPL139C SLO1Q3E784 85 aa4.99□□□□□ -1.61
UME1YPL139C RRT15Q3E811 62 aa4.99□□□□□ -1.61
UME1YPL139C UBC5P15732 148 aa4.98□□□□□ -1.61
UME1YPL139C MRPS9P38120 278 aa4.98□□□□□ -1.61
UME1YPL139C YHR140WP38842 239 aa4.98□□□□□ -1.61
UME1YPL139C YNL200CP40165 246 aaKnown RBP4.98□□□□□ -1.61
UME1YPL139C THG1P53215 237 aaKnown RBP4.98□□□□□ -1.61
UME1YPL139C RPL33AP05744 107 aaKnown RBP4.97□□□□□ -1.61
UME1YPL139C TOA2P32774 122 aa4.97□□□□□ -1.61
UME1YPL139C PET8P38921 284 aa4.97□□□□□ -1.61
UME1YPL139C YIA6P40556 373 aa4.97□□□□□ -1.61
UME1YPL139C RPL33BP41056 107 aaKnown RBP4.97□□□□□ -1.61
UME1YPL139C SPC1P46965 94 aa4.97□□□□□ -1.61
UME1YPL139C OST3P48439 350 aa4.97□□□□□ -1.61
UME1YPL139C PKR1Q03880 122 aaKnown RBP4.97□□□□□ -1.61
UME1YPL139C YDR115WQ04598 105 aa4.97□□□□□ -1.61
UME1YPL139C RPL31AP0C2H8 113 aaKnown RBP4.96□□□□□ -1.62
UME1YPL139C ANB1P19211 157 aa4.96□□□□□ -1.62
UME1YPL139C URM1P40554 99 aaPredicted RBP4.96□□□□□ -1.62
UME1YPL139C SAE3P89114 91 aa4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms