RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W VMA7P39111 118 aa1.45□□□□□ -2.18
VPS16YPL045W YEL067CP39978 195 aa1.45□□□□□ -2.18
VPS16YPL045W MPM1P40364 252 aa1.45□□□□□ -2.18
VPS16YPL045W HPM1P40481 377 aa1.45□□□□□ -2.18
VPS16YPL045W SFT1P43682 97 aa1.45□□□□□ -2.18
VPS16YPL045W FIT2Q08906 153 aa1.45□□□□□ -2.18
VPS16YPL045W RPS1BP23248 255 aaKnown RBP1.44□□□□□ -2.18
VPS16YPL045W UGX2P32772 223 aa1.44□□□□□ -2.18
VPS16YPL045W YKR045CP36138 183 aa1.44□□□□□ -2.18
VPS16YPL045W YKR070WP36151 352 aaKnown RBP1.44□□□□□ -2.18
VPS16YPL045W CCS1P40202 249 aaKnown RBP1.44□□□□□ -2.18
VPS16YPL045W YGR017WP53210 297 aa1.44□□□□□ -2.18
VPS16YPL045W YML079WQ03629 201 aa1.44□□□□□ -2.18
VPS16YPL045W YLR099W-AQ3E798 87 aa1.44□□□□□ -2.18
VPS16YPL045W SCS22Q6Q595 175 aa1.44□□□□□ -2.18
VPS16YPL045W TOR1P35169 2470 aa1.44□□□□□ -2.18
VPS16YPL045W SPS2P08459 502 aa1.43□□□□□ -2.18
VPS16YPL045W TMA19P35691 167 aaKnown RBP1.43□□□□□ -2.18
VPS16YPL045W MRPL15P36523 253 aa1.43□□□□□ -2.18
VPS16YPL045W RGM1Q00453 211 aa1.43□□□□□ -2.18
VPS16YPL045W BOL1Q3E793 110 aa1.43□□□□□ -2.18
VPS16YPL045W YGR269WP40326 108 aa1.43□□□□□ -2.18
VPS16YPL045W ALB1P47019 175 aaPredicted RBP1.43□□□□□ -2.18
VPS16YPL045W ELC1Q03071 99 aa1.43□□□□□ -2.18
VPS16YPL045W TVP18Q04767 167 aa1.43□□□□□ -2.18
VPS16YPL045W STF2P16965 84 aa1.42□□□□□ -2.18
VPS16YPL045W ATP19P81451 68 aa1.42□□□□□ -2.18
VPS16YPL045W YHR086W-AQ3E746 53 aa1.42□□□□□ -2.18
VPS16YPL045W YKL018C-AQ3E7A7 99 aa1.42□□□□□ -2.18
VPS16YPL045W YIL046W-AQ3E7Z4 54 aa1.42□□□□□ -2.18
VPS16YPL045W NRG2P38082 220 aa1.42□□□□□ -2.18
VPS16YPL045W YIL086CP40503 102 aa1.42□□□□□ -2.18
VPS16YPL045W APS2Q00381 147 aa1.42□□□□□ -2.18
VPS16YPL045W MET31Q03081 177 aa1.42□□□□□ -2.18
VPS16YPL045W ELP6Q04868 273 aa1.42□□□□□ -2.18
VPS16YPL045W YHR007C-AQ07074 71 aa1.42□□□□□ -2.18
VPS16YPL045W IRC19Q07843 230 aa1.42□□□□□ -2.18
VPS16YPL045W YLR118CQ12354 227 aa1.42□□□□□ -2.18
VPS16YPL045W FLO9P39712 1322 aa1.42□□□□□ -2.18
VPS16YPL045W CSF1Q12150 2958 aa1.41□□□□□ -2.18
VPS16YPL045W YCR050CP25630 102 aa1.41□□□□□ -2.18
VPS16YPL045W PHS1P40857 217 aa1.41□□□□□ -2.18
VPS16YPL045W LSM8P47093 109 aaKnown RBP1.41□□□□□ -2.18
VPS16YPL045W SPG1P50088 95 aa1.41□□□□□ -2.18
VPS16YPL045W IGO1P53897 168 aa1.41□□□□□ -2.18
VPS16YPL045W ARL3Q02804 198 aa1.41□□□□□ -2.18
VPS16YPL045W TMA23Q03525 211 aa1.41□□□□□ -2.18
VPS16YPL045W YOR304C-AO14468 76 aa1.41□□□□□ -2.18
VPS16YPL045W YHL042WP38729 150 aa1.41□□□□□ -2.18
VPS16YPL045W RGI1P40043 161 aaPredicted RBP1.41□□□□□ -2.18
VPS16YPL045W YOR385WQ08909 290 aa1.41□□□□□ -2.18
VPS16YPL045W YPL225WQ08971 146 aaKnown RBP1.41□□□□□ -2.18
VPS16YPL045W YDL157CQ12082 118 aa1.41□□□□□ -2.18
VPS16YPL045W YIR021W-AQ3E739 70 aa1.41□□□□□ -2.18
VPS16YPL045W RPB7P34087 171 aa1.4□□□□□ -2.19
VPS16YPL045W FLX1P40464 311 aa1.4□□□□□ -2.19
VPS16YPL045W DIE2P50076 525 aa1.4□□□□□ -2.19
VPS16YPL045W YCL001W-AP87012 153 aa1.4□□□□□ -2.19
VPS16YPL045W AIM11P87275 137 aa1.4□□□□□ -2.19
VPS16YPL045W NMA1Q06178 401 aaKnown RBP1.4□□□□□ -2.19
VPS16YPL045W YOL131WQ08270 108 aa1.4□□□□□ -2.19
VPS16YPL045W TEL1P38110 2787 aa1.4□□□□□ -2.19
VPS16YPL045W YBL010CP32788 280 aa1.4□□□□□ -2.19
VPS16YPL045W RPS27AP35997 82 aaKnown RBP1.4□□□□□ -2.19
VPS16YPL045W YBR219CP38317 127 aa1.4□□□□□ -2.19
VPS16YPL045W RPS27BP38711 82 aa1.4□□□□□ -2.19
VPS16YPL045W YAL064WP39711 94 aa1.4□□□□□ -2.19
VPS16YPL045W RPS12P48589 143 aaKnown RBP1.4□□□□□ -2.19
VPS16YPL045W KEI1Q06346 221 aa1.4□□□□□ -2.19
VPS16YPL045W GCN1P33892 2672 aaKnown RBP1.39□□□□□ -2.19
VPS16YPL045W COX5BP00425 151 aa1.39□□□□□ -2.19
VPS16YPL045W HPA3P39979 161 aa1.39□□□□□ -2.19
VPS16YPL045W GAT4P40569 121 aa1.39□□□□□ -2.19
VPS16YPL045W SAE3P89114 91 aa1.39□□□□□ -2.19
VPS16YPL045W RUB1Q03919 77 aa1.39□□□□□ -2.19
VPS16YPL045W IRA2P19158 3079 aa1.39□□□□□ -2.19
VPS16YPL045W ADK1P07170 222 aaKnown RBP1.39□□□□□ -2.19
VPS16YPL045W RPS25BP0C0T4 108 aaKnown RBP1.39□□□□□ -2.19
VPS16YPL045W BLM10P43583 2143 aa1.39□□□□□ -2.19
VPS16YPL045W AVO2Q04749 426 aa1.39□□□□□ -2.19
VPS16YPL045W SOM1Q05676 74 aa1.39□□□□□ -2.19
VPS16YPL045W GPI11Q06636 219 aa1.39□□□□□ -2.19
VPS16YPL045W RPS25AQ3E792 108 aaPredicted RBP1.39□□□□□ -2.19
VPS16YPL045W CMC4Q3E7A9 73 aa1.39□□□□□ -2.19
VPS16YPL045W MHF2Q3E829 80 aa1.39□□□□□ -2.19
VPS16YPL045W CDC39P25655 2108 aaKnown RBP1.38□□□□□ -2.19
VPS16YPL045W YSF3P0C074 85 aaPredicted RBP1.38□□□□□ -2.19
VPS16YPL045W YGL041W-AP0C5N3 154 aa1.38□□□□□ -2.19
VPS16YPL045W CUP1-1P0CX80 61 aa1.38□□□□□ -2.19
VPS16YPL045W CUP1-2P0CX81 61 aa1.38□□□□□ -2.19
VPS16YPL045W FYV5P25585 152 aa1.38□□□□□ -2.19
VPS16YPL045W LHP1P33399 275 aaKnown RBP1.38□□□□□ -2.19
VPS16YPL045W SFT2P38166 215 aa1.38□□□□□ -2.19
VPS16YPL045W YLR162WQ06235 118 aa1.38□□□□□ -2.19
VPS16YPL045W YOR032W-AQ8TGS1 66 aa1.38□□□□□ -2.19
VPS16YPL045W SEC16P48415 2195 aaKnown RBP1.38□□□□□ -2.19
VPS16YPL045W YER137CP40083 148 aaKnown RBP1.37□□□□□ -2.19
VPS16YPL045W AIM36Q03798 255 aa1.37□□□□□ -2.19
VPS16YPL045W HUT1Q12520 339 aa1.37□□□□□ -2.19
VPS16YPL045W PRP8P33334 2413 aaKnown RBP1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 76.5 ms