RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W RRT13P40042 185 aa2.55□□□□□ -2
VPS17YOR132W SKI6P46948 246 aaPredicted RBP2.55□□□□□ -2
VPS17YOR132W TTI2P47168 421 aa2.55□□□□□ -2
VPS17YOR132W YDR391CQ04170 232 aa2.55□□□□□ -2
VPS17YOR132W PIN3Q06449 215 aa2.55□□□□□ -2
VPS17YOR132W RAF1Q06891 181 aa2.55□□□□□ -2
VPS17YOR132W POC4Q12245 148 aaPredicted RBP2.55□□□□□ -2
VPS17YOR132W YDL180WQ12301 547 aa2.55□□□□□ -2
VPS17YOR132W SMT3Q12306 101 aaKnown RBP2.55□□□□□ -2
VPS17YOR132W YOR032W-AQ8TGS1 66 aa2.55□□□□□ -2
VPS17YOR132W RPS25BP0C0T4 108 aaKnown RBP2.54□□□□□ -2
VPS17YOR132W FUN14P18411 198 aa2.54□□□□□ -2
VPS17YOR132W QCR9P22289 66 aa2.54□□□□□ -2
VPS17YOR132W HSP10P38910 106 aa2.54□□□□□ -2
VPS17YOR132W YER084WP40057 128 aa2.54□□□□□ -2
VPS17YOR132W NSA2P40078 261 aaKnown RBP2.54□□□□□ -2
VPS17YOR132W YGL088WP53151 121 aa2.54□□□□□ -2
VPS17YOR132W YDR114CQ04597 100 aa2.54□□□□□ -2
VPS17YOR132W FRQ1Q06389 190 aa2.54□□□□□ -2
VPS17YOR132W RPS25AQ3E792 108 aaPredicted RBP2.54□□□□□ -2
VPS17YOR132W ADH1P00330 348 aaKnown RBP2.53□□□□□ -2
VPS17YOR132W POR1P04840 283 aaKnown RBP2.53□□□□□ -2
VPS17YOR132W MRPL44P19956 98 aa2.53□□□□□ -2
VPS17YOR132W ROX3P25046 220 aa2.53□□□□□ -2
VPS17YOR132W CAX4P53223 239 aa2.53□□□□□ -2
VPS17YOR132W CAB4P53332 305 aa2.53□□□□□ -2
VPS17YOR132W DAD3P69850 94 aa2.53□□□□□ -2
VPS17YOR132W RCE1Q03530 315 aa2.53□□□□□ -2
VPS17YOR132W FMP49A0A023PZB3 126 aa2.53□□□□□ -2
VPS17YOR132W YLR156WP0CE96 114 aa2.53□□□□□ -2
VPS17YOR132W YLR159WP0CE97 114 aa2.53□□□□□ -2
VPS17YOR132W YLR161WP0CE98 114 aa2.53□□□□□ -2
VPS17YOR132W COX10P21592 462 aa2.53□□□□□ -2
VPS17YOR132W YGL010WP25338 174 aa2.53□□□□□ -2
VPS17YOR132W CPR5P35176 225 aa2.53□□□□□ -2
VPS17YOR132W YBR090CP38253 122 aa2.53□□□□□ -2
VPS17YOR132W YPL073CP40323 161 aa2.53□□□□□ -2
VPS17YOR132W YIL163CP40448 117 aa2.53□□□□□ -2
VPS17YOR132W GON7P46984 123 aa2.53□□□□□ -2
VPS17YOR132W TDA4P47153 279 aa2.53□□□□□ -2
VPS17YOR132W DSK2P48510 373 aa2.53□□□□□ -2
VPS17YOR132W UPS1Q05776 175 aa2.53□□□□□ -2
VPS17YOR132W NAT3Q06504 195 aa2.53□□□□□ -2
VPS17YOR132W SLO1Q3E784 85 aa2.53□□□□□ -2
VPS17YOR132W YOL085CQ99345 113 aa2.53□□□□□ -2
VPS17YOR132W RPS22AP0C0W1 130 aaKnown RBP2.52□□□□□ -2.01
VPS17YOR132W BET1P22804 142 aa2.52□□□□□ -2.01
VPS17YOR132W TOM40P23644 387 aaKnown RBP2.52□□□□□ -2.01
VPS17YOR132W MRPL11P36521 249 aaPredicted RBP2.52□□□□□ -2.01
VPS17YOR132W YAR068WP39564 161 aa2.52□□□□□ -2.01
VPS17YOR132W GPI2P46961 280 aa2.52□□□□□ -2.01
VPS17YOR132W COF1Q03048 143 aaKnown RBP2.52□□□□□ -2.01
VPS17YOR132W YHP1Q04116 353 aa2.52□□□□□ -2.01
VPS17YOR132W SHH3Q04487 196 aa2.52□□□□□ -2.01
VPS17YOR132W PRP11Q07350 266 aaPredicted RBP2.52□□□□□ -2.01
VPS17YOR132W MCH1Q07376 486 aa2.52□□□□□ -2.01
VPS17YOR132W YOL014WQ08110 124 aa2.52□□□□□ -2.01
VPS17YOR132W GEP5Q12393 293 aa2.52□□□□□ -2.01
VPS17YOR132W COA6Q3E846 104 aa2.52□□□□□ -2.01
VPS17YOR132W ISD11Q6Q560 94 aa2.52□□□□□ -2.01
VPS17YOR132W MIG1P27705 504 aa2.51□□□□□ -2.01
VPS17YOR132W SRP21P32342 167 aa2.51□□□□□ -2.01
VPS17YOR132W UGX2P32772 223 aa2.51□□□□□ -2.01
VPS17YOR132W PAM17P36147 197 aa2.51□□□□□ -2.01
VPS17YOR132W FIP1P45976 327 aa2.51□□□□□ -2.01
VPS17YOR132W OST2P46964 130 aa2.51□□□□□ -2.01
VPS17YOR132W APS2Q00381 147 aa2.51□□□□□ -2.01
VPS17YOR132W ATG39Q06159 398 aa2.51□□□□□ -2.01
VPS17YOR132W ATP15P21306 62 aa2.5□□□□□ -2.01
VPS17YOR132W YHR138CP38841 114 aaPredicted RBP2.5□□□□□ -2.01
VPS17YOR132W YER134CP40081 178 aa2.5□□□□□ -2.01
VPS17YOR132W CYB5P40312 120 aa2.5□□□□□ -2.01
VPS17YOR132W HUA1P40325 198 aa2.5□□□□□ -2.01
VPS17YOR132W SIP18P50263 79 aa2.5□□□□□ -2.01
VPS17YOR132W MIC27P50945 234 aa2.5□□□□□ -2.01
VPS17YOR132W YGR219WP53307 113 aa2.5□□□□□ -2.01
VPS17YOR132W SDH7Q04401 133 aa2.5□□□□□ -2.01
VPS17YOR132W YOR105WQ08504 108 aa2.5□□□□□ -2.01
VPS17YOR132W YGL258W-AQ3E740 77 aa2.5□□□□□ -2.01
VPS17YOR132W YML100W-AQ8TGT0 57 aa2.5□□□□□ -2.01
VPS17YOR132W RPL9AP05738 191 aaKnown RBP2.5□□□□□ -2.01
VPS17YOR132W YFL019CP43576 117 aa2.5□□□□□ -2.01
VPS17YOR132W PIR5P46999 287 aa2.5□□□□□ -2.01
VPS17YOR132W YPL067CQ02754 198 aa2.5□□□□□ -2.01
VPS17YOR132W NAT5Q08689 176 aa2.5□□□□□ -2.01
VPS17YOR132W FYV7Q12247 151 aa2.5□□□□□ -2.01
VPS17YOR132W YOS1Q3E834 85 aa2.5□□□□□ -2.01
VPS17YOR132W YMR105W-AQ8TGS8 64 aa2.5□□□□□ -2.01
VPS17YOR132W YOR304C-AO14468 76 aa2.49□□□□□ -2.01
VPS17YOR132W RPL39P04650 51 aa2.49□□□□□ -2.01
VPS17YOR132W YFL051CP43552 160 aa2.49□□□□□ -2.01
VPS17YOR132W RPL9BP51401 191 aaKnown RBP2.49□□□□□ -2.01
VPS17YOR132W YDR366CP87287 132 aa2.49□□□□□ -2.01
VPS17YOR132W VPS71Q03433 280 aa2.49□□□□□ -2.01
VPS17YOR132W RUB1Q03919 77 aa2.49□□□□□ -2.01
VPS17YOR132W CNL1Q06333 122 aa2.49□□□□□ -2.01
VPS17YOR132W ATP5P09457 212 aa2.48□□□□□ -2.01
VPS17YOR132W MRP49P32388 137 aa2.48□□□□□ -2.01
VPS17YOR132W GSP1P32835 219 aaKnown RBP2.48□□□□□ -2.01
VPS17YOR132W GSP2P32836 220 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms