RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeastyeast

Gene VAM10, Length 345 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM10YOR068C NMA1Q06178 401 aaKnown RBP2.58□□□□□ -2
VAM10YOR068C CSI2Q08054 341 aa2.58□□□□□ -2
VAM10YOR068C TMC1Q08422 150 aaPredicted RBP2.58□□□□□ -2
VAM10YOR068C POC4Q12245 148 aaPredicted RBP2.58□□□□□ -2
VAM10YOR068C TIM22Q12328 207 aa2.58□□□□□ -2
VAM10YOR068C YLR363W-AQ3E747 85 aa2.58□□□□□ -2
VAM10YOR068C ODC2Q99297 307 aa2.58□□□□□ -2
VAM10YOR068C MSB2P32334 1306 aa2.58□□□□□ -2
VAM10YOR068C MLP1Q02455 1875 aaKnown RBP2.58□□□□□ -2
VAM10YOR068C PDR5P33302 1511 aaKnown RBP2.58□□□□□ -2
VAM10YOR068C GDB1Q06625 1536 aa2.58□□□□□ -2
VAM10YOR068C THO2P53552 1597 aaKnown RBP2.57□□□□□ -2
VAM10YOR068C RPA190P10964 1664 aaKnown RBP2.57□□□□□ -2
VAM10YOR068C RRP5Q05022 1729 aaKnown RBP2.57□□□□□ -2
VAM10YOR068C TIM9O74700 87 aa2.57□□□□□ -2
VAM10YOR068C COX4P04037 155 aa2.57□□□□□ -2
VAM10YOR068C RPB9P27999 122 aa2.57□□□□□ -2
VAM10YOR068C YKL044WP36092 106 aa2.57□□□□□ -2
VAM10YOR068C ARC15P40518 154 aaRIP-Chip data2.57□□□□□ -2not detected
VAM10YOR068C YIL054WP40524 105 aa2.57□□□□□ -2
VAM10YOR068C YDR274CP87283 123 aa2.57□□□□□ -2
VAM10YOR068C YOR015WQ12169 119 aa2.57□□□□□ -2
VAM10YOR068C SMT3Q12306 101 aaKnown RBP2.57□□□□□ -2
VAM10YOR068C ATO3Q12359 275 aa2.57□□□□□ -2
VAM10YOR068C EMC6Q12431 108 aa2.57□□□□□ -2
VAM10YOR068C YMR175W-AQ3E766 64 aa2.57□□□□□ -2
VAM10YOR068C SCS22Q6Q595 175 aa2.57□□□□□ -2
VAM10YOR068C VTH1P40438 1549 aa2.57□□□□□ -2
VAM10YOR068C VTH2P40890 1549 aa2.57□□□□□ -2
VAM10YOR068C DOP1Q03921 1698 aa2.57□□□□□ -2
VAM10YOR068C DUR1,2P32528 1835 aaKnown RBP2.56□□□□□ -2
VAM10YOR068C ECM29P38737 1868 aa2.56□□□□□ -2
VAM10YOR068C PAU21P0CE86 164 aa2.56□□□□□ -2
VAM10YOR068C PAU22P0CE87 164 aa2.56□□□□□ -2
VAM10YOR068C HSP26P15992 214 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
VAM10YOR068C YKR045CP36138 183 aa2.56□□□□□ -2
VAM10YOR068C ATG8P38182 117 aaRIP-Chip data2.56□□□□□ -2not detected
VAM10YOR068C YHL042WP38729 150 aa2.56□□□□□ -2
VAM10YOR068C YEL073CP39974 107 aa2.56□□□□□ -2
VAM10YOR068C ATP20Q12233 115 aa2.56□□□□□ -2
VAM10YOR068C YDR119W-AQ2V2P9 66 aa2.56□□□□□ -2
VAM10YOR068C YAL063C-AQ3E791 96 aa2.56□□□□□ -2
VAM10YOR068C CHC1P22137 1653 aaKnown RBP2.55□□□□□ -2
VAM10YOR068C SPO14P36126 1683 aa2.55□□□□□ -2
VAM10YOR068C QCR10P37299 77 aa2.55□□□□□ -2
VAM10YOR068C BCK1Q01389 1478 aa2.55□□□□□ -2
VAM10YOR068C API2Q04413 109 aa2.55□□□□□ -2
VAM10YOR068C RPS25AQ3E792 108 aaPredicted RBP2.55□□□□□ -2
VAM10YOR068C TY4B-HP0C2J7 1802 aa2.54□□□□□ -2
VAM10YOR068C RKR1Q04781 1562 aa2.54□□□□□ -2
VAM10YOR068C RPL22AP05749 121 aaKnown RBP2.54□□□□□ -2
VAM10YOR068C MAK31P23059 88 aa2.54□□□□□ -2
VAM10YOR068C FZF1P32805 299 aa2.54□□□□□ -2
VAM10YOR068C RPB7P34087 171 aa2.54□□□□□ -2
VAM10YOR068C RRT1P38192 103 aa2.54□□□□□ -2
VAM10YOR068C YHL005CP38752 130 aa2.54□□□□□ -2
VAM10YOR068C YGL118CP53132 145 aa2.54□□□□□ -2
VAM10YOR068C MRPS16Q02608 121 aa2.54□□□□□ -2
VAM10YOR068C DAD1Q12248 94 aa2.54□□□□□ -2
VAM10YOR068C TY3B-GQ99315 1547 aa2.53□□□□□ -2
VAM10YOR068C YHR213WP0CI67 198 aa2.53□□□□□ -2
VAM10YOR068C FYV5P25585 152 aa2.53□□□□□ -2
VAM10YOR068C CTR2P38865 189 aa2.53□□□□□ -2
VAM10YOR068C TVP23P38962 199 aa2.53□□□□□ -2
VAM10YOR068C ASP1P38986 381 aaPredicted RBP2.53□□□□□ -2
VAM10YOR068C RSM18P40033 138 aa2.53□□□□□ -2
VAM10YOR068C YNL198CP40166 100 aa2.53□□□□□ -2
VAM10YOR068C IGO1P53897 168 aa2.53□□□□□ -2
VAM10YOR068C TVP15Q03860 143 aa2.53□□□□□ -2
VAM10YOR068C SOM1Q05676 74 aa2.53□□□□□ -2
VAM10YOR068C YPR145C-AQ2V2P0 78 aa2.53□□□□□ -2
VAM10YOR068C YFL041W-AQ3E817 63 aa2.53□□□□□ -2
VAM10YOR068C CDC25P04821 1589 aa2.53□□□□□ -2.01
VAM10YOR068C GCV3P39726 170 aaPredicted RBP2.52□□□□□ -2.01
VAM10YOR068C RRT13P40042 185 aa2.52□□□□□ -2.01
VAM10YOR068C YER187WP40102 141 aa2.52□□□□□ -2.01
VAM10YOR068C YNL217WP40152 326 aa2.52□□□□□ -2.01
VAM10YOR068C SMX2P40204 77 aaKnown RBP2.52□□□□□ -2.01
VAM10YOR068C MIC27P50945 234 aa2.52□□□□□ -2.01
VAM10YOR068C COX12Q01519 83 aa2.52□□□□□ -2.01
VAM10YOR068C MZM1Q03429 123 aaPredicted RBP2.52□□□□□ -2.01
VAM10YOR068C YMR244WQ04018 355 aa2.52□□□□□ -2.01
VAM10YOR068C YOL029CQ08187 201 aa2.52□□□□□ -2.01
VAM10YOR068C YPL247CQ12523 523 aa2.52□□□□□ -2.01
VAM10YOR068C NTE1Q04958 1679 aa2.52□□□□□ -2.01
VAM10YOR068C LAA1P39526 2014 aa2.52□□□□□ -2.01
VAM10YOR068C MDM35O60200 86 aa2.51□□□□□ -2.01
VAM10YOR068C RPL40AP0CH08 128 aaKnown RBP2.51□□□□□ -2.01
VAM10YOR068C RPL40BP0CH09 128 aaKnown RBP2.51□□□□□ -2.01
VAM10YOR068C YBR292CP38357 123 aa2.51□□□□□ -2.01
VAM10YOR068C PAU15P40585 124 aa2.51□□□□□ -2.01
VAM10YOR068C MET31Q03081 177 aa2.51□□□□□ -2.01
VAM10YOR068C YIL102C-AQ2V2P5 75 aa2.51□□□□□ -2.01
VAM10YOR068C YPL038W-AQ3E7B4 63 aa2.51□□□□□ -2.01
VAM10YOR068C RRT15Q3E811 62 aa2.51□□□□□ -2.01
VAM10YOR068C MRPL27P36526 146 aaPredicted RBP2.5□□□□□ -2.01
VAM10YOR068C YHR125WP38831 101 aa2.5□□□□□ -2.01
VAM10YOR068C HSP10P38910 106 aa2.5□□□□□ -2.01
VAM10YOR068C MPC3P53311 146 aa2.5□□□□□ -2.01
VAM10YOR068C RPL22BP56628 122 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms