RNA–Protein interactions for RNA: YNL207W

RIO2, Essential serine kinase involved in the processing of 20S pre-rRNA, yeast

Gene RIO2, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIO2	YNL207W	YPR202W	Q08993	238 aa		0.8	□□□□□ -2.28
RIO2	YNL207W	IRA1	P18963	3092 aa		0.8	□□□□□ -2.28
RIO2	YNL207W	IRA2	P19158	3079 aa		0.8	□□□□□ -2.28
RIO2	YNL207W	RPS22A	P0C0W1	130 aa	Known RBP	0.79	□□□□□ -2.28
RIO2	YNL207W	SLM6	P38343	150 aa		0.79	□□□□□ -2.28
RIO2	YNL207W	IPT1	P38954	527 aa		0.79	□□□□□ -2.28
RIO2	YNL207W	YER181C	P40097	107 aa		0.79	□□□□□ -2.28
RIO2	YNL207W	GPI2	P46961	280 aa		0.79	□□□□□ -2.28
RIO2	YNL207W	YJL009W	P47078	108 aa		0.79	□□□□□ -2.28
RIO2	YNL207W	VMA10	P48836	114 aa	Known RBP	0.79	□□□□□ -2.28
RIO2	YNL207W	IRC21	Q04772	201 aa		0.79	□□□□□ -2.28
RIO2	YNL207W	YPR153W	Q06537	140 aa		0.79	□□□□□ -2.28
RIO2	YNL207W	CMC4	Q3E7A9	73 aa		0.79	□□□□□ -2.28
RIO2	YNL207W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.79	□□□□□ -2.28
RIO2	YNL207W	YIL046W-A	Q3E7Z4	54 aa		0.79	□□□□□ -2.28
RIO2	YNL207W	PHO13	P19881	312 aa		0.78	□□□□□ -2.28
RIO2	YNL207W	MRS4	P23500	304 aa		0.78	□□□□□ -2.28
RIO2	YNL207W	FIG1	P38224	298 aa		0.78	□□□□□ -2.28
RIO2	YNL207W	SED1	Q01589	338 aa		0.78	□□□□□ -2.28
RIO2	YNL207W	GPI11	Q06636	219 aa		0.78	□□□□□ -2.28
RIO2	YNL207W	HUT1	Q12520	339 aa		0.78	□□□□□ -2.28
RIO2	YNL207W	TRA1	P38811	3744 aa		0.77	□□□□□ -2.29
RIO2	YNL207W	CSF1	Q12150	2958 aa		0.77	□□□□□ -2.29
RIO2	YNL207W	YBR056W-A	I2HB52	66 aa		0.77	□□□□□ -2.29
RIO2	YNL207W	RPL33A	P05744	107 aa	Known RBP	0.77	□□□□□ -2.29
RIO2	YNL207W	NHP6A	P11632	93 aa	Known RBP	0.77	□□□□□ -2.29
RIO2	YNL207W	SRP21	P32342	167 aa		0.77	□□□□□ -2.29
RIO2	YNL207W	SRX1	P36077	127 aa		0.77	□□□□□ -2.29
RIO2	YNL207W	MGR2	Q02889	113 aa		0.77	□□□□□ -2.29
RIO2	YNL207W	RAV2	Q03956	351 aa		0.77	□□□□□ -2.29
RIO2	YNL207W	YMR321C	Q04898	105 aa		0.77	□□□□□ -2.29
RIO2	YNL207W	TY4B-H	P0C2J7	1802 aa		0.77	□□□□□ -2.29
RIO2	YNL207W	TY4B-J	P47024	1803 aa		0.77	□□□□□ -2.29
RIO2	YNL207W	RME1	P32338	300 aa	Known RBP	0.76	□□□□□ -2.29
RIO2	YNL207W	MRPL24	P36525	258 aa	Predicted RBP	0.76	□□□□□ -2.29
RIO2	YNL207W	SCS22	Q6Q595	175 aa		0.76	□□□□□ -2.29
RIO2	YNL207W	PMD1	P32634	1753 aa		0.75	□□□□□ -2.29
RIO2	YNL207W	ATG8	P38182	117 aa	RIP-Chip data	0.75	□□□□□ -2.29	not detected
RIO2	YNL207W	HHY1	P39982	102 aa		0.74	□□□□□ -2.29
RIO2	YNL207W	YJL218W	P40892	196 aa	Known RBP	0.74	□□□□□ -2.29
RIO2	YNL207W	EST3	Q03096	181 aa		0.74	□□□□□ -2.29
RIO2	YNL207W	PKR1	Q03880	122 aa	Known RBP	0.74	□□□□□ -2.29
RIO2	YNL207W	PET20	Q99373	253 aa		0.74	□□□□□ -2.29
RIO2	YNL207W	DYN1	P36022	4092 aa		0.74	□□□□□ -2.29
RIO2	YNL207W	HSP12	P22943	109 aa	Known RBP	0.73	□□□□□ -2.29
RIO2	YNL207W	PRM3	Q08931	133 aa		0.73	□□□□□ -2.29
RIO2	YNL207W	COA6	Q3E846	104 aa		0.73	□□□□□ -2.29
RIO2	YNL207W	UBR1	P19812	1950 aa		0.73	□□□□□ -2.29
RIO2	YNL207W	POL2	P21951	2222 aa	Known RBP	0.73	□□□□□ -2.29
RIO2	YNL207W	UTP10	P42945	1769 aa	Known RBP	0.73	□□□□□ -2.29
RIO2	YNL207W	DDR48	P18899	430 aa	Known RBP	0.72	□□□□□ -2.29
RIO2	YNL207W	RAF1	Q06891	181 aa		0.72	□□□□□ -2.29
RIO2	YNL207W	HKR1	P41809	1802 aa		0.72	□□□□□ -2.29
RIO2	YNL207W	RAD50	P12753	1312 aa		0.71	□□□□□ -2.3
RIO2	YNL207W	SPG1	P50088	95 aa		0.71	□□□□□ -2.3
RIO2	YNL207W	SEN15	Q04675	128 aa		0.71	□□□□□ -2.3
RIO2	YNL207W	MHF1	Q3E835	90 aa		0.71	□□□□□ -2.3
RIO2	YNL207W	KTI11	Q3E840	82 aa		0.71	□□□□□ -2.3
RIO2	YNL207W	PET54	P10834	293 aa		0.7	□□□□□ -2.3
RIO2	YNL207W	ANB1	P19211	157 aa		0.7	□□□□□ -2.3
RIO2	YNL207W	YMR141C	P40211	102 aa		0.7	□□□□□ -2.3
RIO2	YNL207W	DIE2	P50076	525 aa		0.7	□□□□□ -2.3
RIO2	YNL207W	YDR366C	P87287	132 aa		0.7	□□□□□ -2.3
RIO2	YNL207W	RIB3	Q99258	208 aa		0.7	□□□□□ -2.3
RIO2	YNL207W	ECM29	P38737	1868 aa		0.69	□□□□□ -2.3
RIO2	YNL207W	YGL014C-A	P0C5N1	53 aa		0.69	□□□□□ -2.3
RIO2	YNL207W	FUN14	P18411	198 aa		0.69	□□□□□ -2.3
RIO2	YNL207W	LSM8	P47093	109 aa	Known RBP	0.69	□□□□□ -2.3
RIO2	YNL207W	NAT5	Q08689	176 aa		0.69	□□□□□ -2.3
RIO2	YNL207W	BRR2	P32639	2163 aa	Known RBP	0.69	□□□□□ -2.3
RIO2	YNL207W	RPS1B	P23248	255 aa	Known RBP	0.68	□□□□□ -2.3
RIO2	YNL207W	SUI1	P32911	108 aa	Known RBP	0.68	□□□□□ -2.3
RIO2	YNL207W	YNL019C	P53975	284 aa		0.68	□□□□□ -2.3
RIO2	YNL207W	YMR122C	Q03879	124 aa		0.68	□□□□□ -2.3
RIO2	YNL207W	DDP1	Q99321	188 aa	Known RBP	0.68	□□□□□ -2.3
RIO2	YNL207W	CCW14	O13547	238 aa		0.67	□□□□□ -2.3
RIO2	YNL207W	COX5B	P00425	151 aa		0.67	□□□□□ -2.3
RIO2	YNL207W	MRPL44	P19956	98 aa		0.67	□□□□□ -2.3
RIO2	YNL207W	FYV5	P25585	152 aa		0.67	□□□□□ -2.3
RIO2	YNL207W	IPI1	P38803	334 aa	Predicted RBP	0.67	□□□□□ -2.3
RIO2	YNL207W	YHR140W	P38842	239 aa		0.67	□□□□□ -2.3
RIO2	YNL207W	LSM1	P47017	172 aa	Known RBP	0.67	□□□□□ -2.3
RIO2	YNL207W	MOG1	P47123	218 aa		0.67	□□□□□ -2.3
RIO2	YNL207W	EFM5	P53200	248 aa	Known RBP	0.67	□□□□□ -2.3
RIO2	YNL207W	HHO1	P53551	258 aa		0.67	□□□□□ -2.3
RIO2	YNL207W	PFY1	P07274	126 aa		0.66	□□□□□ -2.3
RIO2	YNL207W	RPC19	P28000	142 aa	Known RBP	0.66	□□□□□ -2.3
RIO2	YNL207W	ARC19	P33204	171 aa	Known RBP	0.66	□□□□□ -2.3
RIO2	YNL207W	PHB1	P40961	287 aa		0.66	□□□□□ -2.3
RIO2	YNL207W	YCL001W-A	P87012	153 aa		0.66	□□□□□ -2.3
RIO2	YNL207W	SOM1	Q05676	74 aa		0.66	□□□□□ -2.3
RIO2	YNL207W	YHR213W	P0CI67	198 aa		0.65	□□□□□ -2.31
RIO2	YNL207W	LST8	P41318	303 aa		0.65	□□□□□ -2.31
RIO2	YNL207W	NMT1	P14743	455 aa		0.64	□□□□□ -2.31
RIO2	YNL207W	SFT2	P38166	215 aa		0.64	□□□□□ -2.31
RIO2	YNL207W	YGR039W	P53225	103 aa		0.64	□□□□□ -2.31
RIO2	YNL207W	Q0297	Q9ZZV8	51 aa		0.64	□□□□□ -2.31
RIO2	YNL207W	YGR201C	P42936	225 aa		0.63	□□□□□ -2.31
RIO2	YNL207W	MVB12	P42939	101 aa		0.63	□□□□□ -2.31
RIO2	YNL207W	RBL2	P48606	106 aa	Known RBP	0.63	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 68 ms