RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeastyeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEN1YLR430W ROT1Q03691 256 aa3.43□□□□□ -1.86
SEN1YLR430W PBA1Q05778 276 aa3.43□□□□□ -1.86
SEN1YLR430W RPL30P14120 105 aaKnown RBP3.43□□□□□ -1.86
SEN1YLR430W YJR115WP47152 169 aa3.43□□□□□ -1.86
SEN1YLR430W RSM19P53733 91 aaPredicted RBP3.43□□□□□ -1.86
SEN1YLR430W YNR077CP53758 84 aa3.43□□□□□ -1.86
SEN1YLR430W TIM22Q12328 207 aa3.43□□□□□ -1.86
SEN1YLR430W YAR029WP39549 74 aa3.43□□□□□ -1.86
SEN1YLR430W YDR209CQ03480 137 aa3.43□□□□□ -1.86
SEN1YLR430W Q0182Q9ZZW1 134 aa3.43□□□□□ -1.86
SEN1YLR430W RPS8AP0CX39 200 aaKnown RBP3.43□□□□□ -1.86
SEN1YLR430W RPS8BP0CX40 200 aaKnown RBP3.43□□□□□ -1.86
SEN1YLR430W NCE101Q02820 53 aa3.43□□□□□ -1.86
SEN1YLR430W IRC23Q08416 157 aa3.43□□□□□ -1.86
SEN1YLR430W VEL1P53058 206 aa3.42□□□□□ -1.86
SEN1YLR430W YMR254CQ04838 102 aa3.42□□□□□ -1.86
SEN1YLR430W YLR194CQ05777 254 aa3.42□□□□□ -1.86
SEN1YLR430W IRC19Q07843 230 aa3.42□□□□□ -1.86
SEN1YLR430W MED6P38782 295 aa3.42□□□□□ -1.86
SEN1YLR430W PEX22P39718 180 aa3.42□□□□□ -1.86
SEN1YLR430W YIA6P40556 373 aa3.42□□□□□ -1.86
SEN1YLR430W HAL1Q01766 294 aa3.42□□□□□ -1.86
SEN1YLR430W RPL18AP0CX49 186 aaKnown RBP3.42□□□□□ -1.86
SEN1YLR430W RPL18BP0CX50 186 aaKnown RBP3.42□□□□□ -1.86
SEN1YLR430W YLR281CQ05863 155 aa3.42□□□□□ -1.86
SEN1YLR430W VPS68Q12016 184 aa3.42□□□□□ -1.86
SEN1YLR430W YGR219WP53307 113 aa3.42□□□□□ -1.86
SEN1YLR430W YHP1Q04116 353 aa3.42□□□□□ -1.86
SEN1YLR430W MIX14Q04341 121 aa3.42□□□□□ -1.86
SEN1YLR430W PFY1P07274 126 aa3.42□□□□□ -1.86
SEN1YLR430W UBC4P15731 148 aa3.42□□□□□ -1.86
SEN1YLR430W ARF2P19146 181 aaKnown RBP3.42□□□□□ -1.86
SEN1YLR430W SWD3P38123 315 aa3.42□□□□□ -1.86
SEN1YLR430W YER187WP40102 141 aa3.42□□□□□ -1.86
SEN1YLR430W YDR461C-AQ2V2P7 80 aa3.42□□□□□ -1.86
SEN1YLR430W RRS1Q08746 203 aaKnown RBP3.41□□□□□ -1.86
SEN1YLR430W YOR343CQ12484 108 aa3.41□□□□□ -1.86
SEN1YLR430W YLR422WQ06409 1932 aa3.41□□□□□ -1.86
SEN1YLR430W MGR2Q02889 113 aa3.41□□□□□ -1.86
SEN1YLR430W YMR175W-AQ3E766 64 aa3.41□□□□□ -1.86
SEN1YLR430W MLF3P32047 452 aa3.41□□□□□ -1.86
SEN1YLR430W PET8P38921 284 aa3.41□□□□□ -1.86
SEN1YLR430W CCW14O13547 238 aa3.41□□□□□ -1.86
SEN1YLR430W RPL42AP0CX27 106 aaKnown RBP3.41□□□□□ -1.86
SEN1YLR430W RPL42BP0CX28 106 aaKnown RBP3.41□□□□□ -1.86
SEN1YLR430W AIM19P40502 157 aa3.41□□□□□ -1.86
SEN1YLR430W HSK3P69852 69 aa3.41□□□□□ -1.86
SEN1YLR430W YLR112WQ12130 139 aa3.41□□□□□ -1.86
SEN1YLR430W GAT3Q07928 141 aa3.4□□□□□ -1.86
SEN1YLR430W YHR214C-EQ8TGK0 99 aa3.4□□□□□ -1.86
SEN1YLR430W RPS26AP39938 119 aaKnown RBP3.4□□□□□ -1.86
SEN1YLR430W RPS26BP39939 119 aaKnown RBP3.4□□□□□ -1.86
SEN1YLR430W YER079WP40052 210 aaKnown RBP3.4□□□□□ -1.87
SEN1YLR430W YIL029CP40538 142 aa3.4□□□□□ -1.87
SEN1YLR430W SWS2P53937 143 aa3.4□□□□□ -1.87
SEN1YLR430W YMR317WQ04893 1140 aa3.4□□□□□ -1.87
SEN1YLR430W UBR2Q07963 1872 aa3.4□□□□□ -1.87
SEN1YLR430W TOS6P48560 102 aa3.4□□□□□ -1.87
SEN1YLR430W ATP23P53722 227 aa3.4□□□□□ -1.87
SEN1YLR430W YLR111WQ12528 110 aa3.4□□□□□ -1.87
SEN1YLR430W HMRA2P0CY13 119 aa3.4□□□□□ -1.87
SEN1YLR430W LDB16P25587 256 aa3.4□□□□□ -1.87
SEN1YLR430W YFR054CP43622 192 aa3.4□□□□□ -1.87
SEN1YLR430W DAD4P69851 72 aa3.4□□□□□ -1.87
SEN1YLR430W YOL118CQ08259 102 aa3.4□□□□□ -1.87
SEN1YLR430W YOR387CQ08910 206 aa3.4□□□□□ -1.87
SEN1YLR430W COA3Q3E7B2 85 aa3.4□□□□□ -1.87
SEN1YLR430W TOM7P53507 60 aa3.39□□□□□ -1.87
SEN1YLR430W SLH1P53327 1967 aaKnown RBP3.39□□□□□ -1.87
SEN1YLR430W YKR032WP36127 104 aa3.39□□□□□ -1.87
SEN1YLR430W CTR2P38865 189 aa3.39□□□□□ -1.87
SEN1YLR430W SPI1P40092 148 aa3.39□□□□□ -1.87
SEN1YLR430W MTC6P38849 526 aa3.39□□□□□ -1.87
SEN1YLR430W DAT1P13483 248 aaKnown RBP3.38□□□□□ -1.87
SEN1YLR430W TDA7P53882 636 aaPredicted RBP3.38□□□□□ -1.87
SEN1YLR430W NIP7Q08962 181 aaKnown RBP3.38□□□□□ -1.87
SEN1YLR430W IES6P32617 166 aa3.38□□□□□ -1.87
SEN1YLR430W VTC1P40046 129 aaRIP-Chip data3.38□□□□□ -1.87not detected
SEN1YLR430W DCV1P43595 202 aa3.38□□□□□ -1.87
SEN1YLR430W HKR1P41809 1802 aa3.38□□□□□ -1.87
SEN1YLR430W VHS2P40463 436 aa3.38□□□□□ -1.87
SEN1YLR430W YBR126W-AQ8TGU7 68 aa3.38□□□□□ -1.87
SEN1YLR430W MPC2P38857 129 aa3.38□□□□□ -1.87
SEN1YLR430W HUA1P40325 198 aa3.38□□□□□ -1.87
SEN1YLR430W EAF6P47128 113 aa3.38□□□□□ -1.87
SEN1YLR430W RPL11AP0C0W9 174 aaKnown RBP3.37□□□□□ -1.87
SEN1YLR430W YOR192C-CQ3E736 78 aa3.37□□□□□ -1.87
SEN1YLR430W PEX17P40155 199 aa3.37□□□□□ -1.87
SEN1YLR430W HUR1P45820 110 aa3.37□□□□□ -1.87
SEN1YLR430W NRM1P53718 249 aa3.37□□□□□ -1.87
SEN1YLR430W PPT2Q12036 173 aa3.37□□□□□ -1.87
SEN1YLR430W YLR342W-AQ3E810 57 aa3.37□□□□□ -1.87
SEN1YLR430W MOT3P54785 490 aaKnown RBP3.37□□□□□ -1.87
SEN1YLR430W YHR022CP38763 256 aa3.37□□□□□ -1.87
SEN1YLR430W YEL067CP39978 195 aa3.37□□□□□ -1.87
SEN1YLR430W YNL234WP53857 426 aa3.37□□□□□ -1.87
SEN1YLR430W PBP4Q07362 185 aaKnown RBP3.37□□□□□ -1.87
SEN1YLR430W RPL11BQ3E757 174 aaPredicted RBP3.37□□□□□ -1.87
SEN1YLR430W UBR1P19812 1950 aa3.36□□□□□ -1.87
SEN1YLR430W MSA2P36157 363 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms