RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W TIM12P32830 109 aa3.2□□□□□ -1.9
VPS36YLR417W RPL14AP36105 138 aaKnown RBP3.2□□□□□ -1.9
VPS36YLR417W RPL14BP38754 138 aaKnown RBP3.2□□□□□ -1.9
VPS36YLR417W BUD25P85052 153 aa3.2□□□□□ -1.9
VPS36YLR417W HRD1Q08109 551 aa3.2□□□□□ -1.9
VPS36YLR417W Q0144Q9ZZW2 109 aa3.2□□□□□ -1.9
VPS36YLR417W RPS22AP0C0W1 130 aaKnown RBP3.19□□□□□ -1.9
VPS36YLR417W OCH1P31755 480 aa3.19□□□□□ -1.9
VPS36YLR417W FIG1P38224 298 aa3.19□□□□□ -1.9
VPS36YLR417W FYV4P38783 130 aaPredicted RBP3.19□□□□□ -1.9
VPS36YLR417W ERJ5P43613 295 aaPredicted RBP3.19□□□□□ -1.9
VPS36YLR417W EMC4P53073 190 aa3.19□□□□□ -1.9
VPS36YLR417W RPS22BQ3E7Y3 130 aaKnown RBP3.19□□□□□ -1.9
VPS36YLR417W QCR9P22289 66 aa3.19□□□□□ -1.9
VPS36YLR417W CYB5P40312 120 aa3.19□□□□□ -1.9
VPS36YLR417W YDL157CQ12082 118 aa3.19□□□□□ -1.9
VPS36YLR417W SLO1Q3E784 85 aa3.19□□□□□ -1.9
VPS36YLR417W POR1P04840 283 aaKnown RBP3.18□□□□□ -1.9
VPS36YLR417W SHB17P36136 271 aaKnown RBP3.18□□□□□ -1.9
VPS36YLR417W GPI2P46961 280 aa3.18□□□□□ -1.9
VPS36YLR417W CIS3P47001 227 aa3.18□□□□□ -1.9
VPS36YLR417W CGI121Q03705 181 aaKnown RBP3.18□□□□□ -1.9
VPS36YLR417W FSF1Q12029 327 aaKnown RBP3.18□□□□□ -1.9
VPS36YLR417W MRPS8Q03799 155 aa3.17□□□□□ -1.9
VPS36YLR417W PKR1Q03880 122 aaKnown RBP3.17□□□□□ -1.9
VPS36YLR417W CSI2Q08054 341 aa3.17□□□□□ -1.9
VPS36YLR417W YOR105WQ08504 108 aa3.17□□□□□ -1.9
VPS36YLR417W ATP15P21306 62 aa3.16□□□□□ -1.9
VPS36YLR417W YGL010WP25338 174 aa3.16□□□□□ -1.9
VPS36YLR417W ARP3P47117 449 aaKnown RBP3.16□□□□□ -1.9
VPS36YLR417W MIC27P50945 234 aa3.16□□□□□ -1.9
VPS36YLR417W UPS3Q04006 179 aa3.16□□□□□ -1.9
VPS36YLR417W PRP11Q07350 266 aaPredicted RBP3.16□□□□□ -1.9
VPS36YLR417W YLR363W-AQ3E747 85 aa3.16□□□□□ -1.9
VPS36YLR417W YLR365WQ7LIF2 110 aa3.16□□□□□ -1.9
VPS36YLR417W HMRA1P0CY11 126 aa3.16□□□□□ -1.9
VPS36YLR417W SPO13P23624 291 aa3.16□□□□□ -1.9
VPS36YLR417W AHT1P29589 182 aa3.16□□□□□ -1.9
VPS36YLR417W YKR041WP36134 250 aa3.16□□□□□ -1.9
VPS36YLR417W LSM2P38203 95 aaKnown RBP3.16□□□□□ -1.9
VPS36YLR417W YGL230CP53074 147 aa3.16□□□□□ -1.9
VPS36YLR417W GEP7P53171 287 aa3.16□□□□□ -1.9
VPS36YLR417W YLR050CQ12155 161 aaKnown RBP3.16□□□□□ -1.9
VPS36YLR417W TIR1P10863 254 aa3.15□□□□□ -1.91
VPS36YLR417W YER076CP40049 302 aa3.15□□□□□ -1.91
VPS36YLR417W MSL1P40567 111 aaPredicted RBP3.15□□□□□ -1.91
VPS36YLR417W RPL33BP41056 107 aaKnown RBP3.15□□□□□ -1.91
VPS36YLR417W SKI6P46948 246 aaPredicted RBP3.15□□□□□ -1.91
VPS36YLR417W COA2Q3E823 68 aa3.15□□□□□ -1.91
VPS36YLR417W STT4P37297 1900 aa3.15□□□□□ -1.91
VPS36YLR417W YOR304C-AO14468 76 aa3.14□□□□□ -1.91
VPS36YLR417W HYP2P23301 157 aaKnown RBP3.14□□□□□ -1.91
VPS36YLR417W DER1P38307 211 aa3.14□□□□□ -1.91
VPS36YLR417W YBR220CP38318 560 aa3.14□□□□□ -1.91
VPS36YLR417W TVP23P38962 199 aa3.14□□□□□ -1.91
VPS36YLR417W MOB1P40484 314 aa3.14□□□□□ -1.91
VPS36YLR417W RIM9Q04734 239 aa3.14□□□□□ -1.91
VPS36YLR417W FLO9P39712 1322 aa3.14□□□□□ -1.91
VPS36YLR417W RPS28BP0C0X0 67 aaKnown RBP3.13□□□□□ -1.91
VPS36YLR417W SRP21P32342 167 aa3.13□□□□□ -1.91
VPS36YLR417W YKR070WP36151 352 aaKnown RBP3.13□□□□□ -1.91
VPS36YLR417W ELC1Q03071 99 aa3.13□□□□□ -1.91
VPS36YLR417W NAT3Q06504 195 aa3.13□□□□□ -1.91
VPS36YLR417W DGA1Q08650 418 aa3.13□□□□□ -1.91
VPS36YLR417W WIP1Q2V2P8 89 aa3.13□□□□□ -1.91
VPS36YLR417W RPS28AQ3E7X9 67 aaPredicted RBP3.13□□□□□ -1.91
VPS36YLR417W SEC11P15367 167 aa3.13□□□□□ -1.91
VPS36YLR417W MRS4P23500 304 aa3.13□□□□□ -1.91
VPS36YLR417W YER134CP40081 178 aa3.13□□□□□ -1.91
VPS36YLR417W YDR274CP87283 123 aa3.13□□□□□ -1.91
VPS36YLR417W NCE101Q02820 53 aa3.13□□□□□ -1.91
VPS36YLR417W YPR174CQ06616 221 aaPredicted RBP3.13□□□□□ -1.91
VPS36YLR417W YIL102C-AQ2V2P5 75 aa3.13□□□□□ -1.91
VPS36YLR417W YPR108W-AQ3E7B3 70 aa3.13□□□□□ -1.91
VPS36YLR417W YLR422WQ06409 1932 aa3.12□□□□□ -1.91
VPS36YLR417W YHR138CP38841 114 aaPredicted RBP3.12□□□□□ -1.91
VPS36YLR417W SBH2P52871 88 aa3.12□□□□□ -1.91
VPS36YLR417W RGM1Q00453 211 aa3.12□□□□□ -1.91
VPS36YLR417W IRC19Q07843 230 aa3.12□□□□□ -1.91
VPS36YLR417W SNU13P39990 126 aaKnown RBP3.11□□□□□ -1.91
VPS36YLR417W CCS1P40202 249 aaKnown RBP3.11□□□□□ -1.91
VPS36YLR417W YJR015WP47090 510 aa3.11□□□□□ -1.91
VPS36YLR417W AIM34Q03673 198 aa3.11□□□□□ -1.91
VPS36YLR417W RPB7P34087 171 aa3.1□□□□□ -1.91
VPS36YLR417W YOR343CQ12484 108 aa3.1□□□□□ -1.91
VPS36YLR417W RPL30P14120 105 aaKnown RBP3.1□□□□□ -1.91
VPS36YLR417W YKL044WP36092 106 aa3.1□□□□□ -1.91
VPS36YLR417W SVP26P38869 228 aa3.1□□□□□ -1.91
VPS36YLR417W YGR269WP40326 108 aa3.1□□□□□ -1.91
VPS36YLR417W TDA4P47153 279 aa3.1□□□□□ -1.91
VPS36YLR417W YKL023C-AQ2V2P3 75 aa3.1□□□□□ -1.91
VPS36YLR417W FPR2P32472 135 aa3.09□□□□□ -1.91
VPS36YLR417W ATP19P81451 68 aa3.09□□□□□ -1.91
VPS36YLR417W VPS71Q03433 280 aa3.09□□□□□ -1.91
VPS36YLR417W YLR296WQ05898 108 aa3.09□□□□□ -1.91
VPS36YLR417W SHH4Q06236 168 aa3.09□□□□□ -1.91
VPS36YLR417W MPD1Q12404 318 aaKnown RBP3.09□□□□□ -1.91
VPS36YLR417W YIR021W-AQ3E739 70 aa3.09□□□□□ -1.91
VPS36YLR417W HUG1Q6Q5K6 68 aa3.09□□□□□ -1.91
VPS36YLR417W RAD6P06104 172 aa3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms