RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W ENV10Q99382 181 aa0.54□□□□□ -2.32
SMD2YLR275W RPL22AP05749 121 aaKnown RBP0.53□□□□□ -2.32
SMD2YLR275W YGR240C-AQ3E786 66 aa0.53□□□□□ -2.32
SMD2YLR275W TY1B-HO13535 1793 aa0.52□□□□□ -2.33
SMD2YLR275W URA2P07259 2214 aaKnown RBP0.52□□□□□ -2.33
SMD2YLR275W SAE3P89114 91 aa0.52□□□□□ -2.33
SMD2YLR275W GPI19Q04082 140 aa0.52□□□□□ -2.33
SMD2YLR275W SPC2Q04969 178 aa0.52□□□□□ -2.33
SMD2YLR275W NKP2Q06162 153 aa0.52□□□□□ -2.33
SMD2YLR275W DYN2Q02647 92 aa0.51□□□□□ -2.33
SMD2YLR275W YOR376W-AQ3E805 51 aa0.51□□□□□ -2.33
SMD2YLR275W POP7P38291 140 aa0.5□□□□□ -2.33
SMD2YLR275W YIL014C-AQ02598 104 aa0.5□□□□□ -2.33
SMD2YLR275W YGL041C-BQ3E750 60 aa0.5□□□□□ -2.33
SMD2YLR275W SNF11P38956 169 aa0.49□□□□□ -2.33
SMD2YLR275W YFR035CP43608 114 aa0.49□□□□□ -2.33
SMD2YLR275W LCL1Q02786 101 aa0.49□□□□□ -2.33
SMD2YLR275W ARL3Q02804 198 aa0.49□□□□□ -2.33
SMD2YLR275W SLO1Q3E784 85 aa0.49□□□□□ -2.33
SMD2YLR275W MYO2P19524 1574 aaKnown RBP0.49□□□□□ -2.33
SMD2YLR275W MRP49P32388 137 aa0.48□□□□□ -2.33
SMD2YLR275W RAD50P12753 1312 aa0.46□□□□□ -2.34
SMD2YLR275W AUA1P32450 94 aa0.46□□□□□ -2.34
SMD2YLR275W ACP1P32463 125 aa0.46□□□□□ -2.34
SMD2YLR275W RPS29BP41058 56 aaKnown RBP0.46□□□□□ -2.34
SMD2YLR275W OST5Q92316 86 aa0.46□□□□□ -2.34
SMD2YLR275W CYB5P40312 120 aa0.45□□□□□ -2.34
SMD2YLR275W PAU12P53343 120 aa0.45□□□□□ -2.34
SMD2YLR275W YPL261CQ08976 102 aa0.45□□□□□ -2.34
SMD2YLR275W YLR285C-AQ3E771 56 aa0.45□□□□□ -2.34
SMD2YLR275W YPK9Q12697 1472 aa0.45□□□□□ -2.34
SMD2YLR275W SNF2P22082 1703 aa0.44□□□□□ -2.34
SMD2YLR275W AIM11P87275 137 aa0.44□□□□□ -2.34
SMD2YLR275W SPC24Q04477 213 aa0.44□□□□□ -2.34
SMD2YLR275W FRQ1Q06389 190 aa0.44□□□□□ -2.34
SMD2YLR275W YLR118CQ12354 227 aa0.44□□□□□ -2.34
SMD2YLR275W COX23P38824 151 aa0.43□□□□□ -2.34
SMD2YLR275W YHR130CP38834 111 aa0.43□□□□□ -2.34
SMD2YLR275W VMA7P39111 118 aa0.43□□□□□ -2.34
SMD2YLR275W YEA6P39953 335 aa0.43□□□□□ -2.34
SMD2YLR275W YDR010CQ12426 110 aa0.43□□□□□ -2.34
SMD2YLR275W PCC1Q3E833 88 aa0.43□□□□□ -2.34
SMD2YLR275W SEC16P48415 2195 aaKnown RBP0.42□□□□□ -2.34
SMD2YLR275W TDA2P40045 126 aa0.42□□□□□ -2.34
SMD2YLR275W RPL22BP56628 122 aaKnown RBP0.42□□□□□ -2.34
SMD2YLR275W YLR099W-AQ3E798 87 aa0.42□□□□□ -2.34
SMD2YLR275W RPB11P38902 120 aa0.41□□□□□ -2.34
SMD2YLR275W VPS55P47111 140 aa0.41□□□□□ -2.34
SMD2YLR275W MRPS12P53732 153 aa0.41□□□□□ -2.34
SMD2YLR275W YLR363W-AQ3E747 85 aa0.41□□□□□ -2.34
SMD2YLR275W BNI1P41832 1953 aa0.41□□□□□ -2.34
SMD2YLR275W YCR099CP25657 155 aa0.4□□□□□ -2.35
SMD2YLR275W YER187WP40102 141 aa0.4□□□□□ -2.35
SMD2YLR275W BLM10P43583 2143 aa0.4□□□□□ -2.35
SMD2YLR275W ECM5Q03214 1411 aa0.39□□□□□ -2.35
SMD2YLR275W YIR020CP40575 100 aa0.39□□□□□ -2.35
SMD2YLR275W SNN1P48232 102 aa0.39□□□□□ -2.35
SMD2YLR275W YOR097CQ12274 175 aaPredicted RBP0.39□□□□□ -2.35
SMD2YLR275W DNA2P38859 1522 aa0.38□□□□□ -2.35
SMD2YLR275W DAD1Q12248 94 aa0.38□□□□□ -2.35
SMD2YLR275W YBR072C-AQ3E794 53 aa0.37□□□□□ -2.35
SMD2YLR275W HMRA2P0CY13 119 aa0.36□□□□□ -2.35
SMD2YLR275W PAU24P38155 120 aa0.36□□□□□ -2.35
SMD2YLR275W PAU2P32612 120 aa0.35□□□□□ -2.35
SMD2YLR275W YHR173CP38864 112 aa0.35□□□□□ -2.35
SMD2YLR275W URB1P34241 1764 aaKnown RBP0.34□□□□□ -2.35
SMD2YLR275W YAR029WP39549 74 aa0.34□□□□□ -2.36
SMD2YLR275W GTT1P40582 234 aa0.34□□□□□ -2.36
SMD2YLR275W YOL164W-AQ3E7A5 60 aa0.34□□□□□ -2.36
SMD2YLR275W YRF1-6P53819 1859 aa0.33□□□□□ -2.36
SMD2YLR275W PAM16P42949 149 aa0.33□□□□□ -2.36
SMD2YLR275W APS2Q00381 147 aa0.33□□□□□ -2.36
SMD2YLR275W YCL048W-AQ2V2Q2 79 aa0.33□□□□□ -2.36
SMD2YLR275W YLR365WQ7LIF2 110 aa0.33□□□□□ -2.36
SMD2YLR275W BRR2P32639 2163 aaKnown RBP0.33□□□□□ -2.36
SMD2YLR275W SEC7P11075 2009 aaKnown RBP0.33□□□□□ -2.36
SMD2YLR275W TY4B-HP0C2J7 1802 aa0.32□□□□□ -2.36
SMD2YLR275W YLR042CQ07990 161 aa0.32□□□□□ -2.36
SMD2YLR275W PAU19P0CE85 124 aa0.31□□□□□ -2.36
SMD2YLR275W PAU3P25610 124 aa0.31□□□□□ -2.36
SMD2YLR275W YLR255CO13574 117 aa0.3□□□□□ -2.36
SMD2YLR275W GCV3P39726 170 aaPredicted RBP0.3□□□□□ -2.36
SMD2YLR275W RTR2Q12378 196 aa0.3□□□□□ -2.36
SMD2YLR275W FAS2P19097 1887 aaKnown RBP0.3□□□□□ -2.36
SMD2YLR275W YIL086CP40503 102 aa0.29□□□□□ -2.36
SMD2YLR275W LSM6Q06406 86 aaKnown RBP0.29□□□□□ -2.36
SMD2YLR275W WIP1Q2V2P8 89 aa0.29□□□□□ -2.36
SMD2YLR275W MYO1P08964 1928 aa0.28□□□□□ -2.36
SMD2YLR275W ADK1P07170 222 aaKnown RBP0.27□□□□□ -2.37
SMD2YLR275W SHU1P38751 150 aa0.27□□□□□ -2.37
SMD2YLR275W IMP2P46972 177 aa0.27□□□□□ -2.37
SMD2YLR275W YIR021W-AQ3E739 70 aa0.27□□□□□ -2.37
SMD2YLR275W CCW14O13547 238 aa0.26□□□□□ -2.37
SMD2YLR275W HUR1P45820 110 aa0.26□□□□□ -2.37
SMD2YLR275W YOL118CQ08259 102 aa0.26□□□□□ -2.37
SMD2YLR275W COX19Q3E731 98 aa0.25□□□□□ -2.37
SMD2YLR275W TOP2P06786 1428 aaKnown RBP0.24□□□□□ -2.37
SMD2YLR275W YHR138CP38841 114 aaPredicted RBP0.24□□□□□ -2.37
SMD2YLR275W YDR210WQ03482 75 aa0.24□□□□□ -2.37
SMD2YLR275W YLR419WQ06698 1435 aaKnown RBP0.23□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms