RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W YBR242WP38331 238 aa1.74□□□□□ -2.13
HRD3YLR207W VTC1P40046 129 aaRIP-Chip data1.74□□□□□ -2.13not detected
HRD3YLR207W YGR219WP53307 113 aa1.74□□□□□ -2.13
HRD3YLR207W FIT1Q04433 528 aa1.74□□□□□ -2.13
HRD3YLR207W COA4Q05809 96 aa1.74□□□□□ -2.13
HRD3YLR207W CNL1Q06333 122 aa1.74□□□□□ -2.13
HRD3YLR207W YIR021W-AQ3E739 70 aa1.74□□□□□ -2.13
HRD3YLR207W HUG1Q6Q5K6 68 aa1.74□□□□□ -2.13
HRD3YLR207W Q0297Q9ZZV8 51 aa1.74□□□□□ -2.13
HRD3YLR207W RPB7P34087 171 aa1.74□□□□□ -2.13
HRD3YLR207W VMA7P39111 118 aa1.74□□□□□ -2.13
HRD3YLR207W YER137CP40083 148 aaKnown RBP1.74□□□□□ -2.13
HRD3YLR207W YIR020CP40575 100 aa1.74□□□□□ -2.13
HRD3YLR207W YIR035CP40579 254 aa1.74□□□□□ -2.13
HRD3YLR207W NAT3Q06504 195 aa1.74□□□□□ -2.13
HRD3YLR207W POR1P04840 283 aaKnown RBP1.73□□□□□ -2.13
HRD3YLR207W RAD6P06104 172 aa1.73□□□□□ -2.13
HRD3YLR207W MRP17P28778 131 aa1.73□□□□□ -2.13
HRD3YLR207W FMT1P32785 401 aa1.73□□□□□ -2.13
HRD3YLR207W NSA2P40078 261 aaKnown RBP1.73□□□□□ -2.13
HRD3YLR207W PGD1P40356 397 aa1.73□□□□□ -2.13
HRD3YLR207W FYV12Q08559 129 aa1.73□□□□□ -2.13
HRD3YLR207W YNL277W-AQ3E7Z0 62 aa1.73□□□□□ -2.13
HRD3YLR207W YER135CP40082 130 aa1.73□□□□□ -2.13
HRD3YLR207W YER181CP40097 107 aa1.73□□□□□ -2.13
HRD3YLR207W ARL3Q02804 198 aa1.73□□□□□ -2.13
HRD3YLR207W IRC23Q08416 157 aa1.73□□□□□ -2.13
HRD3YLR207W BOL1Q3E793 110 aa1.73□□□□□ -2.13
HRD3YLR207W DYN1P36022 4092 aa1.72□□□□□ -2.13
HRD3YLR207W PHO85P17157 305 aa1.72□□□□□ -2.13
HRD3YLR207W PEX4P29340 183 aa1.72□□□□□ -2.13
HRD3YLR207W GEP7P53171 287 aa1.72□□□□□ -2.13
HRD3YLR207W YPL067CQ02754 198 aa1.72□□□□□ -2.13
HRD3YLR207W SHH3Q04487 196 aa1.72□□□□□ -2.13
HRD3YLR207W SCP1Q08873 200 aa1.72□□□□□ -2.13
HRD3YLR207W YLR146W-AQ2V2P1 62 aa1.72□□□□□ -2.13
HRD3YLR207W YIL059CP40520 121 aa1.72□□□□□ -2.13
HRD3YLR207W APS2Q00381 147 aa1.72□□□□□ -2.13
HRD3YLR207W SYM1Q06563 197 aa1.72□□□□□ -2.13
HRD3YLR207W SPC25P40014 221 aa1.71□□□□□ -2.14
HRD3YLR207W YMR253CQ04835 414 aa1.71□□□□□ -2.14
HRD3YLR207W UPS1Q05776 175 aa1.71□□□□□ -2.14
HRD3YLR207W YOR268CQ08734 132 aa1.71□□□□□ -2.14
HRD3YLR207W YPR108W-AQ3E7B3 70 aa1.71□□□□□ -2.14
HRD3YLR207W YLR365WQ7LIF2 110 aa1.71□□□□□ -2.14
HRD3YLR207W FMP49A0A023PZB3 126 aa1.71□□□□□ -2.14
HRD3YLR207W NOP1P15646 327 aaKnown RBP1.71□□□□□ -2.14
HRD3YLR207W MRP49P32388 137 aa1.71□□□□□ -2.14
HRD3YLR207W FYV4P38783 130 aaPredicted RBP1.71□□□□□ -2.14
HRD3YLR207W CCS1P40202 249 aaKnown RBP1.71□□□□□ -2.14
HRD3YLR207W YOR385WQ08909 290 aa1.71□□□□□ -2.14
HRD3YLR207W CCW14O13547 238 aa1.7□□□□□ -2.14
HRD3YLR207W YOR304C-AO14468 76 aa1.7□□□□□ -2.14
HRD3YLR207W GSP1P32835 219 aaKnown RBP1.7□□□□□ -2.14
HRD3YLR207W GSP2P32836 220 aaKnown RBP1.7□□□□□ -2.14
HRD3YLR207W YKR045CP36138 183 aa1.7□□□□□ -2.14
HRD3YLR207W YHR140WP38842 239 aa1.7□□□□□ -2.14
HRD3YLR207W SNU13P39990 126 aaKnown RBP1.7□□□□□ -2.14
HRD3YLR207W YNL200CP40165 246 aaKnown RBP1.7□□□□□ -2.14
HRD3YLR207W HUA1P40325 198 aa1.7□□□□□ -2.14
HRD3YLR207W AIM11P87275 137 aa1.7□□□□□ -2.14
HRD3YLR207W YHP1Q04116 353 aa1.7□□□□□ -2.14
HRD3YLR207W POC4Q12245 148 aaPredicted RBP1.7□□□□□ -2.14
HRD3YLR207W COA2Q3E823 68 aa1.7□□□□□ -2.14
HRD3YLR207W YCR101CP25607 182 aa1.7□□□□□ -2.14
HRD3YLR207W PAM17P36147 197 aa1.7□□□□□ -2.14
HRD3YLR207W ERV15P38312 142 aa1.7□□□□□ -2.14
HRD3YLR207W YPT31P38555 223 aaKnown RBP1.7□□□□□ -2.14
HRD3YLR207W EST3Q03096 181 aa1.7□□□□□ -2.14
HRD3YLR207W YMR090WQ04304 227 aaKnown RBP1.7□□□□□ -2.14
HRD3YLR207W FSF1Q12029 327 aaKnown RBP1.7□□□□□ -2.14
HRD3YLR207W ROX3P25046 220 aa1.69□□□□□ -2.14
HRD3YLR207W AHT1P29589 182 aa1.69□□□□□ -2.14
HRD3YLR207W SHB17P36136 271 aaKnown RBP1.69□□□□□ -2.14
HRD3YLR207W SMD3P43321 101 aaKnown RBP1.69□□□□□ -2.14
HRD3YLR207W YGR017WP53210 297 aa1.69□□□□□ -2.14
HRD3YLR207W FCF2Q12035 217 aaPredicted RBP1.69□□□□□ -2.14
HRD3YLR207W ATP20Q12233 115 aa1.69□□□□□ -2.14
HRD3YLR207W RPS25BP0C0T4 108 aaKnown RBP1.69□□□□□ -2.14
HRD3YLR207W HSP12P22943 109 aaKnown RBP1.69□□□□□ -2.14
HRD3YLR207W RPL14AP36105 138 aaKnown RBP1.69□□□□□ -2.14
HRD3YLR207W RPL14BP38754 138 aaKnown RBP1.69□□□□□ -2.14
HRD3YLR207W YHR138CP38841 114 aaPredicted RBP1.69□□□□□ -2.14
HRD3YLR207W RPL33BP41056 107 aaKnown RBP1.69□□□□□ -2.14
HRD3YLR207W LIP1Q03579 150 aa1.69□□□□□ -2.14
HRD3YLR207W YOR015WQ12169 119 aa1.69□□□□□ -2.14
HRD3YLR207W RPS25AQ3E792 108 aaPredicted RBP1.69□□□□□ -2.14
HRD3YLR207W SCM4P32564 187 aa1.68□□□□□ -2.14
HRD3YLR207W UGX2P32772 223 aa1.68□□□□□ -2.14
HRD3YLR207W FZF1P32805 299 aa1.68□□□□□ -2.14
HRD3YLR207W SRL3P36167 246 aa1.68□□□□□ -2.14
HRD3YLR207W RRT1P38192 103 aa1.68□□□□□ -2.14
HRD3YLR207W YEA6P39953 335 aa1.68□□□□□ -2.14
HRD3YLR207W SFT1P43682 97 aa1.68□□□□□ -2.14
HRD3YLR207W ANT1Q06497 328 aa1.68□□□□□ -2.14
HRD3YLR207W YLR118CQ12354 227 aa1.68□□□□□ -2.14
HRD3YLR207W SNN1P48232 102 aa1.68□□□□□ -2.14
HRD3YLR207W SPG1P50088 95 aa1.68□□□□□ -2.14
HRD3YLR207W YGR025WP53216 100 aa1.68□□□□□ -2.14
HRD3YLR207W MPC3P53311 146 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 55.6 ms