RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeastyeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBI4YLL039C SAS2P40963 338 aa3.57□□□□□ -1.84
UBI4YLL039C WWM1P43582 211 aaKnown RBP3.57□□□□□ -1.84
UBI4YLL039C YGR050CP53231 118 aa3.57□□□□□ -1.84
UBI4YLL039C CPD1P53314 239 aa3.57□□□□□ -1.84
UBI4YLL039C VPS71Q03433 280 aa3.57□□□□□ -1.84
UBI4YLL039C SPG4Q04438 115 aa3.57□□□□□ -1.84
UBI4YLL039C ARR3Q06598 404 aa3.57□□□□□ -1.84
UBI4YLL039C RKI1Q12189 258 aa3.57□□□□□ -1.84
UBI4YLL039C YGL258W-AQ3E740 77 aa3.57□□□□□ -1.84
UBI4YLL039C YCR024C-BQ3E7Z8 88 aa3.57□□□□□ -1.84
UBI4YLL039C YBL059WP34224 193 aa3.56□□□□□ -1.84
UBI4YLL039C YPT10P38146 199 aa3.56□□□□□ -1.84
UBI4YLL039C YHR130CP38834 111 aa3.56□□□□□ -1.84
UBI4YLL039C LST8P41318 303 aa3.56□□□□□ -1.84
UBI4YLL039C YNL184CP53876 108 aa3.56□□□□□ -1.84
UBI4YLL039C POS5Q06892 414 aa3.56□□□□□ -1.84
UBI4YLL039C YCR085WP25650 117 aa3.55□□□□□ -1.84
UBI4YLL039C NHP2P32495 156 aaPredicted RBP3.55□□□□□ -1.84
UBI4YLL039C PAU7P39545 55 aa3.55□□□□□ -1.84
UBI4YLL039C YGR269WP40326 108 aa3.55□□□□□ -1.84
UBI4YLL039C VPS55P47111 140 aa3.55□□□□□ -1.84
UBI4YLL039C DPP1Q05521 289 aa3.55□□□□□ -1.84
UBI4YLL039C ARC18Q05933 178 aaKnown RBP3.55□□□□□ -1.84
UBI4YLL039C LDS2Q08218 356 aa3.55□□□□□ -1.84
UBI4YLL039C YLR361C-AQ3E795 98 aa3.55□□□□□ -1.84
UBI4YLL039C YGR035W-AQ45U48 73 aa3.55□□□□□ -1.84
UBI4YLL039C RPL27AP0C2H6 136 aaKnown RBP3.54□□□□□ -1.84
UBI4YLL039C RPL27BP0C2H7 136 aaKnown RBP3.54□□□□□ -1.84
UBI4YLL039C INO4P13902 151 aa3.54□□□□□ -1.84
UBI4YLL039C KRE1P17260 313 aa3.54□□□□□ -1.84
UBI4YLL039C YPS1P32329 569 aa3.54□□□□□ -1.84
UBI4YLL039C MRPL38P35996 138 aaPredicted RBP3.54□□□□□ -1.84
UBI4YLL039C YPL073CP40323 161 aa3.54□□□□□ -1.84
UBI4YLL039C FIP1P45976 327 aa3.54□□□□□ -1.84
UBI4YLL039C OST2P46964 130 aa3.54□□□□□ -1.84
UBI4YLL039C BRP1P53194 125 aa3.54□□□□□ -1.84
UBI4YLL039C HOR7Q05827 59 aa3.54□□□□□ -1.84
UBI4YLL039C MRPL23Q12487 163 aaPredicted RBP3.54□□□□□ -1.84
UBI4YLL039C ISD11Q6Q560 94 aa3.54□□□□□ -1.84
UBI4YLL039C MRS3P10566 314 aa3.53□□□□□ -1.84
UBI4YLL039C CPT1P17898 393 aa3.53□□□□□ -1.84
UBI4YLL039C RPA12P32529 125 aaKnown RBP3.53□□□□□ -1.84
UBI4YLL039C APS1P35181 156 aa3.53□□□□□ -1.84
UBI4YLL039C YBR090CP38253 122 aa3.53□□□□□ -1.84
UBI4YLL039C YHR173CP38864 112 aa3.53□□□□□ -1.84
UBI4YLL039C MST28P39552 234 aa3.53□□□□□ -1.84
UBI4YLL039C YFL065CP43539 102 aa3.53□□□□□ -1.84
UBI4YLL039C TDA4P47153 279 aa3.53□□□□□ -1.84
UBI4YLL039C POP3P53833 195 aaPredicted RBP3.53□□□□□ -1.84
UBI4YLL039C PBP4Q07362 185 aaKnown RBP3.53□□□□□ -1.84
UBI4YLL039C GEP3Q08622 556 aa3.53□□□□□ -1.84
UBI4YLL039C DGA1Q08650 418 aa3.53□□□□□ -1.84
UBI4YLL039C YPR203WQ08994 102 aa3.53□□□□□ -1.84
UBI4YLL039C YKR041WP36134 250 aa3.52□□□□□ -1.85
UBI4YLL039C YER181CP40097 107 aa3.52□□□□□ -1.85
UBI4YLL039C YGR219WP53307 113 aa3.52□□□□□ -1.85
UBI4YLL039C COX12Q01519 83 aa3.52□□□□□ -1.85
UBI4YLL039C ABF2Q02486 183 aa3.52□□□□□ -1.85
UBI4YLL039C IRC23Q08416 157 aa3.52□□□□□ -1.85
UBI4YLL039C USV1Q12132 391 aa3.52□□□□□ -1.85
UBI4YLL039C POC4Q12245 148 aaPredicted RBP3.52□□□□□ -1.85
UBI4YLL039C RPS28BP0C0X0 67 aaKnown RBP3.51□□□□□ -1.85
UBI4YLL039C HSP12P22943 109 aaKnown RBP3.51□□□□□ -1.85
UBI4YLL039C YBL071CP38185 102 aa3.51□□□□□ -1.85
UBI4YLL039C CSH1P38287 376 aa3.51□□□□□ -1.85
UBI4YLL039C YNL217WP40152 326 aa3.51□□□□□ -1.85
UBI4YLL039C TOS8P53147 276 aa3.51□□□□□ -1.85
UBI4YLL039C SWT21P53873 357 aaPredicted RBP3.51□□□□□ -1.85
UBI4YLL039C YDR042CQ03205 200 aa3.51□□□□□ -1.85
UBI4YLL039C HPA2Q06592 156 aa3.51□□□□□ -1.85
UBI4YLL039C UTP23Q12339 254 aaKnown RBP3.51□□□□□ -1.85
UBI4YLL039C RPS28AQ3E7X9 67 aaPredicted RBP3.51□□□□□ -1.85
UBI4YLL039C VAR1P02381 398 aa3.5□□□□□ -1.85
UBI4YLL039C PIS1P06197 220 aaKnown RBP3.5□□□□□ -1.85
UBI4YLL039C YHR212W-AP0CX91 67 aa3.5□□□□□ -1.85
UBI4YLL039C CUP2P15315 225 aa3.5□□□□□ -1.85
UBI4YLL039C MIC12P38341 106 aa3.5□□□□□ -1.85
UBI4YLL039C YNL194CP40169 301 aa3.5□□□□□ -1.85
UBI4YLL039C UBC7Q02159 165 aa3.5□□□□□ -1.85
UBI4YLL039C MRX11Q03079 207 aa3.5□□□□□ -1.85
UBI4YLL039C YMR007WQ03675 126 aa3.5□□□□□ -1.85
UBI4YLL039C YHP1Q04116 353 aa3.5□□□□□ -1.85
UBI4YLL039C YFL041W-AQ3E817 63 aa3.5□□□□□ -1.85
UBI4YLL039C YBR121C-AP0C5L4 52 aa3.49□□□□□ -1.85
UBI4YLL039C YCR022CP25620 114 aa3.49□□□□□ -1.85
UBI4YLL039C PAM17P36147 197 aa3.49□□□□□ -1.85
UBI4YLL039C RRT1P38192 103 aa3.49□□□□□ -1.85
UBI4YLL039C OXA1P39952 402 aa3.49□□□□□ -1.85
UBI4YLL039C YPI1P43587 155 aa3.49□□□□□ -1.85
UBI4YLL039C YGR018CP53211 109 aa3.49□□□□□ -1.85
UBI4YLL039C YMR181CQ03231 154 aa3.49□□□□□ -1.85
UBI4YLL039C KTI11Q3E840 82 aa3.49□□□□□ -1.85
UBI4YLL039C YER175W-AQ8TGU4 54 aa3.49□□□□□ -1.85
UBI4YLL039C YMR316C-AI2HB70 103 aa3.48□□□□□ -1.85
UBI4YLL039C RPL23AP0CX41 137 aaKnown RBP3.48□□□□□ -1.85
UBI4YLL039C RPL23BP0CX42 137 aaKnown RBP3.48□□□□□ -1.85
UBI4YLL039C PHD1P36093 366 aa3.48□□□□□ -1.85
UBI4YLL039C YGR039WP53225 103 aa3.48□□□□□ -1.85
UBI4YLL039C AYT1Q12226 474 aa3.48□□□□□ -1.85
UBI4YLL039C DFM1Q12743 341 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms