RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W SCS22Q6Q595 175 aa2.9□□□□□ -1.95
SOF1YLL011W DDP1Q99321 188 aaKnown RBP2.9□□□□□ -1.95
SOF1YLL011W UTP20P35194 2493 aaKnown RBP2.89□□□□□ -1.95
SOF1YLL011W YER039C-AP0CD97 72 aa2.89□□□□□ -1.95
SOF1YLL011W YEL067CP39978 195 aa2.89□□□□□ -1.95
SOF1YLL011W FYV7Q12247 151 aa2.89□□□□□ -1.95
SOF1YLL011W HFA1P32874 2273 aa2.88□□□□□ -1.95
SOF1YLL011W INO4P13902 151 aa2.88□□□□□ -1.95
SOF1YLL011W SEC11P15367 167 aa2.88□□□□□ -1.95
SOF1YLL011W FMT1P32785 401 aa2.88□□□□□ -1.95
SOF1YLL011W SAE3P89114 91 aa2.88□□□□□ -1.95
SOF1YLL011W YPR174CQ06616 221 aaPredicted RBP2.88□□□□□ -1.95
SOF1YLL011W YHL018WP38744 120 aaPredicted RBP2.87□□□□□ -1.95
SOF1YLL011W MPM1P40364 252 aa2.87□□□□□ -1.95
SOF1YLL011W HYR1P40581 163 aaKnown RBP2.87□□□□□ -1.95
SOF1YLL011W KNH1P50112 268 aa2.87□□□□□ -1.95
SOF1YLL011W SWC7Q06707 132 aa2.87□□□□□ -1.95
SOF1YLL011W COX8P04039 78 aa2.86□□□□□ -1.95
SOF1YLL011W YOR062CP36025 268 aa2.86□□□□□ -1.95
SOF1YLL011W SDH4P37298 181 aa2.86□□□□□ -1.95
SOF1YLL011W YHR022CP38763 256 aa2.86□□□□□ -1.95
SOF1YLL011W SVP26P38869 228 aa2.86□□□□□ -1.95
SOF1YLL011W FLX1P40464 311 aa2.86□□□□□ -1.95
SOF1YLL011W RPS12P48589 143 aaKnown RBP2.86□□□□□ -1.95
SOF1YLL011W THG1P53215 237 aaKnown RBP2.86□□□□□ -1.95
SOF1YLL011W CYT2Q00873 224 aa2.86□□□□□ -1.95
SOF1YLL011W YML079WQ03629 201 aa2.86□□□□□ -1.95
SOF1YLL011W YHP1Q04116 353 aa2.86□□□□□ -1.95
SOF1YLL011W YPL225WQ08971 146 aaKnown RBP2.86□□□□□ -1.95
SOF1YLL011W FCF2Q12035 217 aaPredicted RBP2.86□□□□□ -1.95
SOF1YLL011W KTI11Q3E840 82 aa2.86□□□□□ -1.95
SOF1YLL011W SPS2P08459 502 aa2.85□□□□□ -1.95
SOF1YLL011W AIM18P38884 321 aa2.85□□□□□ -1.95
SOF1YLL011W RPB11P38902 120 aa2.85□□□□□ -1.95
SOF1YLL011W YAL064WP39711 94 aa2.85□□□□□ -1.95
SOF1YLL011W YGR269WP40326 108 aa2.85□□□□□ -1.95
SOF1YLL011W LSM8P47093 109 aaKnown RBP2.85□□□□□ -1.95
SOF1YLL011W ATP19P81451 68 aa2.85□□□□□ -1.95
SOF1YLL011W YLR042CQ07990 161 aa2.85□□□□□ -1.95
SOF1YLL011W YOR385WQ08909 290 aa2.85□□□□□ -1.95
SOF1YLL011W EMC6Q12431 108 aa2.85□□□□□ -1.95
SOF1YLL011W OCA6Q12454 224 aa2.85□□□□□ -1.95
SOF1YLL011W YHL042WP38729 150 aa2.84□□□□□ -1.95
SOF1YLL011W ERG25P53045 309 aa2.84□□□□□ -1.95
SOF1YLL011W POP3P53833 195 aaPredicted RBP2.84□□□□□ -1.95
SOF1YLL011W FIT2Q08906 153 aa2.84□□□□□ -1.95
SOF1YLL011W ANB1P19211 157 aa2.84□□□□□ -1.96
SOF1YLL011W YGL230CP53074 147 aa2.84□□□□□ -1.96
SOF1YLL011W DAD4P69851 72 aa2.84□□□□□ -1.96
SOF1YLL011W YMR252CQ04814 134 aa2.84□□□□□ -1.96
SOF1YLL011W IRC19Q07843 230 aa2.84□□□□□ -1.96
SOF1YLL011W MDM35O60200 86 aa2.83□□□□□ -1.96
SOF1YLL011W CLB6P32943 380 aa2.83□□□□□ -1.96
SOF1YLL011W CCS1P40202 249 aaKnown RBP2.83□□□□□ -1.96
SOF1YLL011W YJL144WP47009 104 aa2.83□□□□□ -1.96
SOF1YLL011W DIE2P50076 525 aa2.83□□□□□ -1.96
SOF1YLL011W DAD3P69850 94 aa2.83□□□□□ -1.96
SOF1YLL011W UBR1P19812 1950 aa2.82□□□□□ -1.96
SOF1YLL011W STF2P16965 84 aa2.82□□□□□ -1.96
SOF1YLL011W BUD23P25627 275 aaPredicted RBP2.82□□□□□ -1.96
SOF1YLL011W CWC27Q02770 301 aa2.82□□□□□ -1.96
SOF1YLL011W SOM1Q05676 74 aa2.82□□□□□ -1.96
SOF1YLL011W KEI1Q06346 221 aa2.82□□□□□ -1.96
SOF1YLL011W YOR376W-AQ3E805 51 aa2.82□□□□□ -1.96
SOF1YLL011W COX5BP00425 151 aa2.81□□□□□ -1.96
SOF1YLL011W YGL041W-AP0C5N3 154 aa2.81□□□□□ -1.96
SOF1YLL011W MRPL15P36523 253 aa2.81□□□□□ -1.96
SOF1YLL011W SPO73P40031 143 aa2.81□□□□□ -1.96
SOF1YLL011W MIX17Q03667 156 aa2.81□□□□□ -1.96
SOF1YLL011W YDL157CQ12082 118 aa2.81□□□□□ -1.96
SOF1YLL011W YOR097CQ12274 175 aaPredicted RBP2.81□□□□□ -1.96
SOF1YLL011W YCL042WP25572 119 aa2.8□□□□□ -1.96
SOF1YLL011W UTR5P32630 166 aa2.8□□□□□ -1.96
SOF1YLL011W YAR029WP39549 74 aa2.8□□□□□ -1.96
SOF1YLL011W YIL086CP40503 102 aa2.8□□□□□ -1.96
SOF1YLL011W ELP6Q04868 273 aa2.8□□□□□ -1.96
SOF1YLL011W SML1Q04964 104 aa2.8□□□□□ -1.96
SOF1YLL011W NMA1Q06178 401 aaKnown RBP2.8□□□□□ -1.96
SOF1YLL011W GTT2Q12390 233 aa2.8□□□□□ -1.96
SOF1YLL011W DYN1P36022 4092 aa2.8□□□□□ -1.96
SOF1YLL011W YPR096CO13587 100 aa2.79□□□□□ -1.96
SOF1YLL011W FYV5P25585 152 aa2.79□□□□□ -1.96
SOF1YLL011W SRL3P36167 246 aa2.79□□□□□ -1.96
SOF1YLL011W QCR10P37299 77 aa2.79□□□□□ -1.96
SOF1YLL011W BAT2P47176 376 aaKnown RBP2.79□□□□□ -1.96
SOF1YLL011W MPC1P53157 130 aaKnown RBP2.79□□□□□ -1.96
SOF1YLL011W RAF1Q06891 181 aa2.79□□□□□ -1.96
SOF1YLL011W PRM7Q12459 698 aa2.79□□□□□ -1.96
SOF1YLL011W YDL012CQ12489 107 aa2.79□□□□□ -1.96
SOF1YLL011W VAR1P02381 398 aa2.78□□□□□ -1.96
SOF1YLL011W TMA19P35691 167 aaKnown RBP2.78□□□□□ -1.96
SOF1YLL011W YCL001W-AP87012 153 aa2.78□□□□□ -1.96
SOF1YLL011W YKR045CP36138 183 aa2.77□□□□□ -1.97
SOF1YLL011W RCE1Q03530 315 aa2.77□□□□□ -1.97
SOF1YLL011W RTR2Q12378 196 aa2.77□□□□□ -1.97
SOF1YLL011W YMR030W-AQ3E760 96 aa2.77□□□□□ -1.97
SOF1YLL011W DSE2P38844 325 aa2.77□□□□□ -1.97
SOF1YLL011W GIS2P53849 153 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
SOF1YLL011W YPR153WQ06537 140 aa2.77□□□□□ -1.97
SOF1YLL011W MDN1Q12019 4910 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms