RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C CDC40P40968 455 aaPredicted RBP7.14□□□□□ -1.27
YSR3YKR053C TY1A-JR2P47099 440 aa7.14□□□□□ -1.27
YSR3YKR053C TY1A-DR1Q03856 440 aa7.14□□□□□ -1.27
YSR3YKR053C TY1A-ML1Q04706 440 aaKnown RBP7.14□□□□□ -1.27
YSR3YKR053C DPP1Q05521 289 aa7.14□□□□□ -1.27
YSR3YKR053C PBA1Q05778 276 aa7.14□□□□□ -1.27
YSR3YKR053C YPR195CQ06594 109 aa7.14□□□□□ -1.27
YSR3YKR053C TY1A-GR2Q12485 440 aa7.14□□□□□ -1.27
YSR3YKR053C YNR034W-AQ3E841 98 aa7.14□□□□□ -1.27
YSR3YKR053C RPL42AP0CX27 106 aaKnown RBP7.13□□□□□ -1.27
YSR3YKR053C RPL42BP0CX28 106 aaKnown RBP7.13□□□□□ -1.27
YSR3YKR053C YJL028WP47062 111 aa7.13□□□□□ -1.27
YSR3YKR053C PMP3P87284 55 aa7.13□□□□□ -1.27
YSR3YKR053C RTC6O14464 93 aa7.12□□□□□ -1.27
YSR3YKR053C UBC5P15732 148 aa7.12□□□□□ -1.27
YSR3YKR053C PAM17P36147 197 aa7.12□□□□□ -1.27
YSR3YKR053C POM33Q12164 279 aa7.12□□□□□ -1.27
YSR3YKR053C RPL11AP0C0W9 174 aaKnown RBP7.11□□□□□ -1.27
YSR3YKR053C PAU15P40585 124 aa7.11□□□□□ -1.27
YSR3YKR053C VMA21P41806 77 aa7.11□□□□□ -1.27
YSR3YKR053C GIS2P53849 153 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
YSR3YKR053C VTS1Q08831 523 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
YSR3YKR053C RPL11BQ3E757 174 aaPredicted RBP7.11□□□□□ -1.27
YSR3YKR053C YMR122W-AQ3E842 84 aa7.11□□□□□ -1.27
YSR3YKR053C RPL33AP05744 107 aaKnown RBP7.1□□□□□ -1.27
YSR3YKR053C ATG8P38182 117 aaRIP-Chip data7.1□□□□□ -1.27not detected
YSR3YKR053C RPL33BP41056 107 aaKnown RBP7.1□□□□□ -1.27
YSR3YKR053C YGR149WP48236 432 aa7.1□□□□□ -1.27
YSR3YKR053C SNU23Q12368 194 aaPredicted RBP7.1□□□□□ -1.27
YSR3YKR053C CNB1P25296 175 aa7.09□□□□□ -1.27
YSR3YKR053C DAD2P36162 133 aa7.09□□□□□ -1.27
YSR3YKR053C YPR010C-AA5Z2X5 72 aa7.08□□□□□ -1.28
YSR3YKR053C ANB1P19211 157 aa7.07□□□□□ -1.28
YSR3YKR053C MRP49P32388 137 aa7.07□□□□□ -1.28
YSR3YKR053C SDH8P38345 138 aa7.07□□□□□ -1.28
YSR3YKR053C SDS23P53172 527 aa7.07□□□□□ -1.28
YSR3YKR053C RPL23AP0CX41 137 aaKnown RBP7.06□□□□□ -1.28
YSR3YKR053C RPL23BP0CX42 137 aaKnown RBP7.06□□□□□ -1.28
YSR3YKR053C YKR032WP36127 104 aa7.06□□□□□ -1.28
YSR3YKR053C ARC15P40518 154 aaRIP-Chip data7.06□□□□□ -1.28not detected
YSR3YKR053C DCV1P43595 202 aa7.06□□□□□ -1.28
YSR3YKR053C DAN1P47178 298 aa7.06□□□□□ -1.28
YSR3YKR053C TY1A-LR4P0C2I8 440 aaKnown RBP7.04□□□□□ -1.28
YSR3YKR053C TY1A-DR6P0CX70 440 aa7.04□□□□□ -1.28
YSR3YKR053C TY1A-ER1P0CX71 440 aa7.04□□□□□ -1.28
YSR3YKR053C TY1A-LR2P0CX72 440 aa7.04□□□□□ -1.28
YSR3YKR053C TY1A-PLP0CX73 440 aa7.04□□□□□ -1.28
YSR3YKR053C TY1A-JR1P0CX74 440 aa7.04□□□□□ -1.28
YSR3YKR053C TY1A-LR3P0CX75 440 aa7.04□□□□□ -1.28
YSR3YKR053C TY1A-ML2P0CX76 440 aa7.04□□□□□ -1.28
YSR3YKR053C FSF1Q12029 327 aaKnown RBP7.04□□□□□ -1.28
YSR3YKR053C TY1A-GR1Q12085 440 aa7.04□□□□□ -1.28
YSR3YKR053C TY1A-PR3Q6Q5H1 440 aaKnown RBP7.04□□□□□ -1.28
YSR3YKR053C TY1A-OLQ92392 440 aaKnown RBP7.04□□□□□ -1.28
YSR3YKR053C YPL229WQ99395 206 aa7.04□□□□□ -1.28
YSR3YKR053C YDR115WQ04598 105 aa7.03□□□□□ -1.28
YSR3YKR053C SVP26P38869 228 aa7.02□□□□□ -1.29
YSR3YKR053C RPS22BQ3E7Y3 130 aaKnown RBP7.02□□□□□ -1.29
YSR3YKR053C SAL1D6W196 494 aa7.01□□□□□ -1.29
YSR3YKR053C DIF1O13577 133 aa7□□□□□ -1.29
YSR3YKR053C PAU19P0CE85 124 aa7□□□□□ -1.29
YSR3YKR053C PAU21P0CE86 164 aa7□□□□□ -1.29
YSR3YKR053C PAU22P0CE87 164 aa7□□□□□ -1.29
YSR3YKR053C PAU3P25610 124 aa7□□□□□ -1.29
YSR3YKR053C YKR070WP36151 352 aaKnown RBP7□□□□□ -1.29
YSR3YKR053C YBR013CP38215 129 aa7□□□□□ -1.29
YSR3YKR053C PET8P38921 284 aa7□□□□□ -1.29
YSR3YKR053C ERG28P40030 148 aa7□□□□□ -1.29
YSR3YKR053C HHO1P53551 258 aa7□□□□□ -1.29
YSR3YKR053C YMR320WQ04897 101 aa7□□□□□ -1.29
YSR3YKR053C LCL2Q08045 131 aa6.99□□□□□ -1.29
YSR3YKR053C WIP1Q2V2P8 89 aa6.99□□□□□ -1.29
YSR3YKR053C YCR024C-BQ3E7Z8 88 aa6.99□□□□□ -1.29
YSR3YKR053C RRT15Q3E811 62 aa6.99□□□□□ -1.29
YSR3YKR053C YIL059CP40520 121 aa6.98□□□□□ -1.29
YSR3YKR053C GLO1P50107 326 aa6.98□□□□□ -1.29
YSR3YKR053C MGR2Q02889 113 aa6.98□□□□□ -1.29
YSR3YKR053C PFY1P07274 126 aa6.97□□□□□ -1.29
YSR3YKR053C SEC4P07560 215 aaKnown RBP6.97□□□□□ -1.29
YSR3YKR053C YER076CP40049 302 aa6.97□□□□□ -1.29
YSR3YKR053C BET5Q03630 159 aa6.97□□□□□ -1.29
YSR3YKR053C FCF1Q05498 189 aaPredicted RBP6.97□□□□□ -1.29
YSR3YKR053C ZEO1Q08245 113 aa6.97□□□□□ -1.29
YSR3YKR053C RPL16AP26784 199 aaKnown RBP6.96□□□□□ -1.3
YSR3YKR053C ERG27Q12452 347 aaKnown RBP6.96□□□□□ -1.3
YSR3YKR053C POR1P04840 283 aaKnown RBP6.95□□□□□ -1.3
YSR3YKR053C YJR146WP47174 117 aa6.95□□□□□ -1.3
YSR3YKR053C YBR209WP38311 105 aa6.94□□□□□ -1.3
YSR3YKR053C YAR023CD6VPM8 179 aa6.93□□□□□ -1.3
YSR3YKR053C MRP10O75012 95 aa6.93□□□□□ -1.3
YSR3YKR053C ADH2P00331 348 aaKnown RBP6.93□□□□□ -1.3
YSR3YKR053C TRP1P00912 224 aa6.93□□□□□ -1.3
YSR3YKR053C NSE4P43124 402 aa6.93□□□□□ -1.3
YSR3YKR053C TOS6P48560 102 aa6.93□□□□□ -1.3
YSR3YKR053C YGL088WP53151 121 aa6.93□□□□□ -1.3
YSR3YKR053C YDR034C-AP0C289 58 aa6.92□□□□□ -1.3
YSR3YKR053C AQY1P0CD91 305 aa6.92□□□□□ -1.3
YSR3YKR053C AIM29P36154 155 aa6.92□□□□□ -1.3
YSR3YKR053C SEC72P39742 193 aaKnown RBP6.92□□□□□ -1.3
YSR3YKR053C NUP42P49686 430 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms