RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W Q0144Q9ZZW2 109 aa1.37□□□□□ -2.19
SSF1YHR066W CDC39P25655 2108 aaKnown RBP1.37□□□□□ -2.19
SSF1YHR066W MDH2P22133 377 aa1.36□□□□□ -2.19
SSF1YHR066W UGX2P32772 223 aa1.36□□□□□ -2.19
SSF1YHR066W VMA7P39111 118 aa1.36□□□□□ -2.19
SSF1YHR066W CCS1P40202 249 aaKnown RBP1.36□□□□□ -2.19
SSF1YHR066W HPM1P40481 377 aa1.36□□□□□ -2.19
SSF1YHR066W SFT1P43682 97 aa1.36□□□□□ -2.19
SSF1YHR066W YML079WQ03629 201 aa1.36□□□□□ -2.19
SSF1YHR066W TVP18Q04767 167 aa1.36□□□□□ -2.19
SSF1YHR066W MDM35O60200 86 aa1.35□□□□□ -2.19
SSF1YHR066W RPS1BP23248 255 aaKnown RBP1.35□□□□□ -2.19
SSF1YHR066W TMA19P35691 167 aaKnown RBP1.35□□□□□ -2.19
SSF1YHR066W YKR070WP36151 352 aaKnown RBP1.35□□□□□ -2.19
SSF1YHR066W EMC4P53073 190 aa1.35□□□□□ -2.19
SSF1YHR066W YLR099W-AQ3E798 87 aa1.35□□□□□ -2.19
SSF1YHR066W RPL43AP0CX25 92 aaKnown RBP1.34□□□□□ -2.19
SSF1YHR066W RPL43BP0CX26 92 aa1.34□□□□□ -2.19
SSF1YHR066W STF2P16965 84 aa1.34□□□□□ -2.19
SSF1YHR066W ALB1P47019 175 aaPredicted RBP1.34□□□□□ -2.19
SSF1YHR066W ELC1Q03071 99 aa1.34□□□□□ -2.19
SSF1YHR066W ELP6Q04868 273 aa1.34□□□□□ -2.19
SSF1YHR066W YHR007C-AQ07074 71 aa1.34□□□□□ -2.19
SSF1YHR066W IRC19Q07843 230 aa1.34□□□□□ -2.19
SSF1YHR066W FLO9P39712 1322 aa1.34□□□□□ -2.2
SSF1YHR066W YOR304C-AO14468 76 aa1.34□□□□□ -2.2
SSF1YHR066W YCR050CP25630 102 aa1.34□□□□□ -2.2
SSF1YHR066W HPA3P39979 161 aa1.34□□□□□ -2.2
SSF1YHR066W YGR269WP40326 108 aa1.34□□□□□ -2.2
SSF1YHR066W PEP8P40335 379 aa1.34□□□□□ -2.2
SSF1YHR066W FLX1P40464 311 aa1.34□□□□□ -2.2
SSF1YHR066W SPG1P50088 95 aa1.34□□□□□ -2.2
SSF1YHR066W YMR030W-AQ3E760 96 aa1.34□□□□□ -2.2
SSF1YHR066W YBL010CP32788 280 aa1.33□□□□□ -2.2
SSF1YHR066W RPB7P34087 171 aa1.33□□□□□ -2.2
SSF1YHR066W YHL042WP38729 150 aa1.33□□□□□ -2.2
SSF1YHR066W PHS1P40857 217 aa1.33□□□□□ -2.2
SSF1YHR066W LSM8P47093 109 aaKnown RBP1.33□□□□□ -2.2
SSF1YHR066W ATP19P81451 68 aa1.33□□□□□ -2.2
SSF1YHR066W APS2Q00381 147 aa1.33□□□□□ -2.2
SSF1YHR066W NMA1Q06178 401 aaKnown RBP1.33□□□□□ -2.2
SSF1YHR066W YDL157CQ12082 118 aa1.33□□□□□ -2.2
SSF1YHR066W YLR118CQ12354 227 aa1.33□□□□□ -2.2
SSF1YHR066W BLM10P43583 2143 aa1.32□□□□□ -2.2
SSF1YHR066W HAP2P06774 265 aa1.32□□□□□ -2.2
SSF1YHR066W RPS25BP0C0T4 108 aaKnown RBP1.32□□□□□ -2.2
SSF1YHR066W YAL064WP39711 94 aa1.32□□□□□ -2.2
SSF1YHR066W DIE2P50076 525 aa1.32□□□□□ -2.2
SSF1YHR066W YCL001W-AP87012 153 aa1.32□□□□□ -2.2
SSF1YHR066W AIM11P87275 137 aa1.32□□□□□ -2.2
SSF1YHR066W SAE3P89114 91 aa1.32□□□□□ -2.2
SSF1YHR066W ARL3Q02804 198 aa1.32□□□□□ -2.2
SSF1YHR066W MZM1Q03429 123 aaPredicted RBP1.32□□□□□ -2.2
SSF1YHR066W TMA23Q03525 211 aa1.32□□□□□ -2.2
SSF1YHR066W RUB1Q03919 77 aa1.32□□□□□ -2.2
SSF1YHR066W SOM1Q05676 74 aa1.32□□□□□ -2.2
SSF1YHR066W YLR162WQ06235 118 aa1.32□□□□□ -2.2
SSF1YHR066W KEI1Q06346 221 aa1.32□□□□□ -2.2
SSF1YHR066W YOR385WQ08909 290 aa1.32□□□□□ -2.2
SSF1YHR066W YIR021W-AQ3E739 70 aa1.32□□□□□ -2.2
SSF1YHR066W RPS25AQ3E792 108 aaPredicted RBP1.32□□□□□ -2.2
SSF1YHR066W COX5BP00425 151 aa1.31□□□□□ -2.2
SSF1YHR066W ADK1P07170 222 aaKnown RBP1.31□□□□□ -2.2
SSF1YHR066W YCL042WP25572 119 aa1.31□□□□□ -2.2
SSF1YHR066W SRX1P36077 127 aa1.31□□□□□ -2.2
SSF1YHR066W ETR1P38071 380 aa1.31□□□□□ -2.2
SSF1YHR066W YBR219CP38317 127 aa1.31□□□□□ -2.2
SSF1YHR066W LDB18Q07887 179 aa1.31□□□□□ -2.2
SSF1YHR066W CMC4Q3E7A9 73 aa1.31□□□□□ -2.2
SSF1YHR066W YIL046W-AQ3E7Z4 54 aa1.31□□□□□ -2.2
SSF1YHR066W DDP1Q99321 188 aaKnown RBP1.31□□□□□ -2.2
SSF1YHR066W DYN1P36022 4092 aa1.3□□□□□ -2.2
SSF1YHR066W YGL041W-AP0C5N3 154 aa1.3□□□□□ -2.2
SSF1YHR066W FPR1P20081 114 aaKnown RBP1.3□□□□□ -2.2
SSF1YHR066W FYV5P25585 152 aa1.3□□□□□ -2.2
SSF1YHR066W QCR10P37299 77 aa1.3□□□□□ -2.2
SSF1YHR066W SFT2P38166 215 aa1.3□□□□□ -2.2
SSF1YHR066W YER137CP40083 148 aaKnown RBP1.3□□□□□ -2.2
SSF1YHR066W GAT4P40569 121 aa1.3□□□□□ -2.2
SSF1YHR066W HYR1P40581 163 aaKnown RBP1.3□□□□□ -2.2
SSF1YHR066W AIM36Q03798 255 aa1.3□□□□□ -2.2
SSF1YHR066W AVO2Q04749 426 aa1.3□□□□□ -2.2
SSF1YHR066W YOR097CQ12274 175 aaPredicted RBP1.3□□□□□ -2.2
SSF1YHR066W HUT1Q12520 339 aa1.3□□□□□ -2.2
SSF1YHR066W LHP1P33399 275 aaKnown RBP1.29□□□□□ -2.2
SSF1YHR066W RPB11P38902 120 aa1.29□□□□□ -2.2
SSF1YHR066W YAE1P47118 141 aaPredicted RBP1.29□□□□□ -2.2
SSF1YHR066W CWC27Q02770 301 aa1.29□□□□□ -2.2
SSF1YHR066W MET31Q03081 177 aa1.29□□□□□ -2.2
SSF1YHR066W YMR252CQ04814 134 aa1.29□□□□□ -2.2
SSF1YHR066W YPR153WQ06537 140 aa1.29□□□□□ -2.2
SSF1YHR066W TAR1Q8TGM6 124 aa1.29□□□□□ -2.2
SSF1YHR066W SLH1P53327 1967 aaKnown RBP1.28□□□□□ -2.2
SSF1YHR066W URA2P07259 2214 aaKnown RBP1.28□□□□□ -2.2
SSF1YHR066W KIN28P06242 306 aa1.28□□□□□ -2.2
SSF1YHR066W HSP150P32478 413 aa1.28□□□□□ -2.2
SSF1YHR066W YEL014CP39999 101 aa1.28□□□□□ -2.2
SSF1YHR066W YEL008WP40001 126 aa1.28□□□□□ -2.2
SSF1YHR066W RCE1Q03530 315 aa1.28□□□□□ -2.2
SSF1YHR066W RAF1Q06891 181 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms