RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A MIX17Q03667 156 aa1.93□□□□□ -2.1
EFG1YGR271C-A FIT3Q08907 204 aa1.93□□□□□ -2.1
EFG1YGR271C-A BEM2P39960 2167 aaKnown RBP1.93□□□□□ -2.1
EFG1YGR271C-A MIX14Q04341 121 aa1.92□□□□□ -2.1
EFG1YGR271C-A YDR029WQ12111 104 aa1.92□□□□□ -2.1
EFG1YGR271C-A PCC1Q3E833 88 aa1.92□□□□□ -2.1
EFG1YGR271C-A FLO9P39712 1322 aa1.91□□□□□ -2.1
EFG1YGR271C-A PAU2P32612 120 aa1.91□□□□□ -2.1
EFG1YGR271C-A ATG8P38182 117 aaRIP-Chip data1.91□□□□□ -2.1not detected
EFG1YGR271C-A EMC5P40540 141 aa1.91□□□□□ -2.1
EFG1YGR271C-A MSL1P40567 111 aaPredicted RBP1.91□□□□□ -2.1
EFG1YGR271C-A SNN1P48232 102 aa1.91□□□□□ -2.1
EFG1YGR271C-A RPL22BP56628 122 aaKnown RBP1.91□□□□□ -2.1
EFG1YGR271C-A YLR194CQ05777 254 aa1.91□□□□□ -2.1
EFG1YGR271C-A HPA2Q06592 156 aa1.91□□□□□ -2.1
EFG1YGR271C-A LTE1P07866 1435 aa1.91□□□□□ -2.1
EFG1YGR271C-A YJL197C-AP0C5P0 93 aa1.9□□□□□ -2.11
EFG1YGR271C-A FPR1P20081 114 aaKnown RBP1.9□□□□□ -2.11
EFG1YGR271C-A DAN1P47178 298 aa1.9□□□□□ -2.11
EFG1YGR271C-A RGM1Q00453 211 aa1.9□□□□□ -2.11
EFG1YGR271C-A YIL014C-AQ02598 104 aa1.9□□□□□ -2.11
EFG1YGR271C-A YLR296WQ05898 108 aa1.9□□□□□ -2.11
EFG1YGR271C-A TAR1Q8TGM6 124 aa1.9□□□□□ -2.11
EFG1YGR271C-A FAS1P07149 2051 aaKnown RBP1.89□□□□□ -2.11
EFG1YGR271C-A QCR8P08525 94 aa1.89□□□□□ -2.11
EFG1YGR271C-A PAU19P0CE85 124 aa1.89□□□□□ -2.11
EFG1YGR271C-A YHR213WP0CI67 198 aa1.89□□□□□ -2.11
EFG1YGR271C-A PAU3P25610 124 aa1.89□□□□□ -2.11
EFG1YGR271C-A SRX1P36077 127 aa1.89□□□□□ -2.11
EFG1YGR271C-A PAU24P38155 120 aa1.89□□□□□ -2.11
EFG1YGR271C-A RPL13BP40212 199 aaKnown RBP1.89□□□□□ -2.11
EFG1YGR271C-A PDR10P51533 1564 aa1.89□□□□□ -2.11
EFG1YGR271C-A PFY1P07274 126 aa1.88□□□□□ -2.11
EFG1YGR271C-A HMRA1P0CY11 126 aa1.88□□□□□ -2.11
EFG1YGR271C-A RSM19P53733 91 aaPredicted RBP1.88□□□□□ -2.11
EFG1YGR271C-A YRF1-3P0CX14 1859 aa1.88□□□□□ -2.11
EFG1YGR271C-A YRF1-7P0CX15 1859 aa1.88□□□□□ -2.11
EFG1YGR271C-A YRF1-6P53819 1859 aa1.88□□□□□ -2.11
EFG1YGR271C-A ECM12O13529 151 aa1.87□□□□□ -2.11
EFG1YGR271C-A YGL014C-AP0C5N1 53 aa1.87□□□□□ -2.11
EFG1YGR271C-A PAU16P35994 123 aa1.87□□□□□ -2.11
EFG1YGR271C-A YBR219CP38317 127 aa1.87□□□□□ -2.11
EFG1YGR271C-A COX23P38824 151 aa1.87□□□□□ -2.11
EFG1YGR271C-A YHR138CP38841 114 aaPredicted RBP1.87□□□□□ -2.11
EFG1YGR271C-A YIR020CP40575 100 aa1.87□□□□□ -2.11
EFG1YGR271C-A PAU15P40585 124 aa1.87□□□□□ -2.11
EFG1YGR271C-A SED1Q01589 338 aa1.87□□□□□ -2.11
EFG1YGR271C-A YMR082CQ04276 118 aa1.87□□□□□ -2.11
EFG1YGR271C-A YLR162WQ06235 118 aa1.87□□□□□ -2.11
EFG1YGR271C-A RPL33AP05744 107 aaKnown RBP1.86□□□□□ -2.11
EFG1YGR271C-A NRG2P38082 220 aa1.86□□□□□ -2.11
EFG1YGR271C-A YBR027CP38220 110 aa1.86□□□□□ -2.11
EFG1YGR271C-A YEL008WP40001 126 aa1.86□□□□□ -2.11
EFG1YGR271C-A LST8P41318 303 aa1.86□□□□□ -2.11
EFG1YGR271C-A SEN15Q04675 128 aa1.86□□□□□ -2.11
EFG1YGR271C-A VAM10Q08474 114 aa1.86□□□□□ -2.11
EFG1YGR271C-A SUS1Q6WNK7 96 aa1.86□□□□□ -2.11
EFG1YGR271C-A SRB6P32570 121 aa1.85□□□□□ -2.11
EFG1YGR271C-A POR2P40478 281 aa1.85□□□□□ -2.11
EFG1YGR271C-A YMR122CQ03879 124 aa1.85□□□□□ -2.11
EFG1YGR271C-A COA3Q3E7B2 85 aa1.85□□□□□ -2.11
EFG1YGR271C-A YNL146C-AQ3E7Z1 64 aa1.85□□□□□ -2.11
EFG1YGR271C-A ESC1Q03661 1658 aaKnown RBP1.85□□□□□ -2.11
EFG1YGR271C-A ROM2P51862 1356 aaKnown RBP1.85□□□□□ -2.11
EFG1YGR271C-A YLR419WQ06698 1435 aaKnown RBP1.84□□□□□ -2.11
EFG1YGR271C-A YHR086W-AQ3E746 53 aa1.84□□□□□ -2.11
EFG1YGR271C-A YLR363W-AQ3E747 85 aa1.84□□□□□ -2.11
EFG1YGR271C-A RRT15Q3E811 62 aa1.84□□□□□ -2.11
EFG1YGR271C-A YSP2Q06681 1438 aa1.83□□□□□ -2.12
EFG1YGR271C-A HMRA2P0CY13 119 aa1.83□□□□□ -2.12
EFG1YGR271C-A YHL005CP38752 130 aa1.83□□□□□ -2.12
EFG1YGR271C-A CYB5P40312 120 aa1.83□□□□□ -2.12
EFG1YGR271C-A PRM3Q08931 133 aa1.83□□□□□ -2.12
EFG1YGR271C-A RPL22AP05749 121 aaKnown RBP1.82□□□□□ -2.12
EFG1YGR271C-A YCL042WP25572 119 aa1.82□□□□□ -2.12
EFG1YGR271C-A AIM4P38305 123 aaPredicted RBP1.82□□□□□ -2.12
EFG1YGR271C-A GCV3P39726 170 aaPredicted RBP1.82□□□□□ -2.12
EFG1YGR271C-A YDR042CQ03205 200 aa1.82□□□□□ -2.12
EFG1YGR271C-A YLR285C-AQ3E771 56 aa1.82□□□□□ -2.12
EFG1YGR271C-A DNA2P38859 1522 aa1.81□□□□□ -2.12
EFG1YGR271C-A CYR1P08678 2026 aaKnown RBP1.81□□□□□ -2.12
EFG1YGR271C-A RSM18P40033 138 aa1.81□□□□□ -2.12
EFG1YGR271C-A PAU5P43575 122 aa1.81□□□□□ -2.12
EFG1YGR271C-A COA4Q05809 96 aa1.81□□□□□ -2.12
EFG1YGR271C-A YIL163CP40448 117 aa1.8□□□□□ -2.12
EFG1YGR271C-A YFL065CP43539 102 aa1.8□□□□□ -2.12
EFG1YGR271C-A YMR321CQ04898 105 aa1.8□□□□□ -2.12
EFG1YGR271C-A LSM6Q06406 86 aaKnown RBP1.8□□□□□ -2.12
EFG1YGR271C-A SWR1Q05471 1514 aa1.8□□□□□ -2.12
EFG1YGR271C-A RPA190P10964 1664 aaKnown RBP1.8□□□□□ -2.12
EFG1YGR271C-A RIF1P29539 1916 aa1.79□□□□□ -2.12
EFG1YGR271C-A YSF3P0C074 85 aaPredicted RBP1.79□□□□□ -2.12
EFG1YGR271C-A ROX3P25046 220 aa1.79□□□□□ -2.12
EFG1YGR271C-A CWP2P43497 92 aa1.79□□□□□ -2.12
EFG1YGR271C-A IRC21Q04772 201 aa1.79□□□□□ -2.12
EFG1YGR271C-A YCL048W-AQ2V2Q2 79 aa1.79□□□□□ -2.12
EFG1YGR271C-A RPS22AP0C0W1 130 aaKnown RBP1.78□□□□□ -2.12
EFG1YGR271C-A ENV10Q99382 181 aa1.78□□□□□ -2.12
EFG1YGR271C-A IMP2P46972 177 aa1.77□□□□□ -2.13
EFG1YGR271C-A ICY1Q04329 127 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms