RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W MRS4P23500 304 aa1.99□□□□□ -2.09
PTI1YGR156W RPB7P34087 171 aa1.99□□□□□ -2.09
PTI1YGR156W PTC1P35182 281 aa1.99□□□□□ -2.09
PTI1YGR156W YPT31P38555 223 aaKnown RBP1.99□□□□□ -2.09
PTI1YGR156W RBL2P48606 106 aaKnown RBP1.99□□□□□ -2.09
PTI1YGR156W YNR064CP53750 290 aa1.99□□□□□ -2.09
PTI1YGR156W SED1Q01589 338 aa1.99□□□□□ -2.09
PTI1YGR156W LIP1Q03579 150 aa1.99□□□□□ -2.09
PTI1YGR156W RAV2Q03956 351 aa1.99□□□□□ -2.09
PTI1YGR156W RRP17Q04031 235 aaPredicted RBP1.99□□□□□ -2.09
PTI1YGR156W INO4P13902 151 aa1.98□□□□□ -2.09
PTI1YGR156W MRPL24P36525 258 aaPredicted RBP1.98□□□□□ -2.09
PTI1YGR156W CCS1P40202 249 aaKnown RBP1.98□□□□□ -2.09
PTI1YGR156W YGR201CP42936 225 aa1.98□□□□□ -2.09
PTI1YGR156W FIT3Q08907 204 aa1.98□□□□□ -2.09
PTI1YGR156W SLH1P53327 1967 aaKnown RBP1.98□□□□□ -2.09
PTI1YGR156W SPS2P08459 502 aa1.97□□□□□ -2.09
PTI1YGR156W ECM31P38122 312 aa1.97□□□□□ -2.09
PTI1YGR156W YHL042WP38729 150 aa1.97□□□□□ -2.09
PTI1YGR156W SMX2P40204 77 aaKnown RBP1.97□□□□□ -2.09
PTI1YGR156W CWC27Q02770 301 aa1.97□□□□□ -2.09
PTI1YGR156W YMR252CQ04814 134 aa1.97□□□□□ -2.09
PTI1YGR156W UIP4Q08926 304 aa1.97□□□□□ -2.09
PTI1YGR156W YOR343CQ12484 108 aa1.97□□□□□ -2.09
PTI1YGR156W YBL010CP32788 280 aa1.96□□□□□ -2.1
PTI1YGR156W YJL218WP40892 196 aaKnown RBP1.96□□□□□ -2.1
PTI1YGR156W YJR015WP47090 510 aa1.96□□□□□ -2.1
PTI1YGR156W BAT2P47176 376 aaKnown RBP1.96□□□□□ -2.1
PTI1YGR156W UPS3Q04006 179 aa1.96□□□□□ -2.1
PTI1YGR156W HRD1Q08109 551 aa1.96□□□□□ -2.1
PTI1YGR156W MDN1Q12019 4910 aaKnown RBP1.96□□□□□ -2.1
PTI1YGR156W DDR48P18899 430 aaKnown RBP1.95□□□□□ -2.1
PTI1YGR156W SPT14P32363 452 aa1.95□□□□□ -2.1
PTI1YGR156W TIM12P32830 109 aa1.95□□□□□ -2.1
PTI1YGR156W MPC1P53157 130 aaKnown RBP1.95□□□□□ -2.1
PTI1YGR156W ELP6Q04868 273 aa1.95□□□□□ -2.1
PTI1YGR156W YDL241WQ07738 123 aa1.95□□□□□ -2.1
PTI1YGR156W MHF2Q3E829 80 aa1.95□□□□□ -2.1
PTI1YGR156W BPH1P25356 2167 aa1.95□□□□□ -2.1
PTI1YGR156W SEN2P16658 377 aa1.94□□□□□ -2.1
PTI1YGR156W STF2P16965 84 aa1.94□□□□□ -2.1
PTI1YGR156W YEL067CP39978 195 aa1.94□□□□□ -2.1
PTI1YGR156W YGL193CP53097 103 aa1.94□□□□□ -2.1
PTI1YGR156W YPL067CQ02754 198 aa1.94□□□□□ -2.1
PTI1YGR156W YML079WQ03629 201 aa1.94□□□□□ -2.1
PTI1YGR156W YOL131WQ08270 108 aa1.94□□□□□ -2.1
PTI1YGR156W YNL146C-AQ3E7Z1 64 aa1.94□□□□□ -2.1
PTI1YGR156W QCR8P08525 94 aa1.93□□□□□ -2.1
PTI1YGR156W SRP21P32342 167 aa1.93□□□□□ -2.1
PTI1YGR156W RGI1P40043 161 aaPredicted RBP1.93□□□□□ -2.1
PTI1YGR156W YFL065CP43539 102 aa1.93□□□□□ -2.1
PTI1YGR156W COF1Q03048 143 aaKnown RBP1.93□□□□□ -2.1
PTI1YGR156W YCL048W-AQ2V2Q2 79 aa1.93□□□□□ -2.1
PTI1YGR156W RPC19P28000 142 aaKnown RBP1.92□□□□□ -2.1
PTI1YGR156W SHB17P36136 271 aaKnown RBP1.92□□□□□ -2.1
PTI1YGR156W YEL008WP40001 126 aa1.92□□□□□ -2.1
PTI1YGR156W YGR269WP40326 108 aa1.92□□□□□ -2.1
PTI1YGR156W SPC2Q04969 178 aa1.92□□□□□ -2.1
PTI1YGR156W TAR1Q8TGM6 124 aa1.92□□□□□ -2.1
PTI1YGR156W HSP12P22943 109 aaKnown RBP1.91□□□□□ -2.1
PTI1YGR156W YFR035CP43608 114 aa1.91□□□□□ -2.1
PTI1YGR156W YDR366CP87287 132 aa1.91□□□□□ -2.1
PTI1YGR156W UBC7Q02159 165 aa1.91□□□□□ -2.1
PTI1YGR156W RFU1Q08003 200 aa1.91□□□□□ -2.1
PTI1YGR156W YKL018C-AQ3E7A7 99 aa1.91□□□□□ -2.1
PTI1YGR156W SCS22Q6Q595 175 aa1.91□□□□□ -2.1
PTI1YGR156W YBR032WP38223 100 aa1.9□□□□□ -2.11
PTI1YGR156W GLC8P41818 229 aa1.9□□□□□ -2.11
PTI1YGR156W EST3Q03096 181 aa1.9□□□□□ -2.11
PTI1YGR156W AIM36Q03798 255 aa1.9□□□□□ -2.11
PTI1YGR156W PRM3Q08931 133 aa1.9□□□□□ -2.11
PTI1YGR156W RPS25BP0C0T4 108 aaKnown RBP1.89□□□□□ -2.11
PTI1YGR156W LHP1P33399 275 aaKnown RBP1.89□□□□□ -2.11
PTI1YGR156W YGR039WP53225 103 aa1.89□□□□□ -2.11
PTI1YGR156W YGR042WP53227 271 aa1.89□□□□□ -2.11
PTI1YGR156W FMN1Q03778 218 aa1.89□□□□□ -2.11
PTI1YGR156W RPS25AQ3E792 108 aaPredicted RBP1.89□□□□□ -2.11
PTI1YGR156W COA3Q3E7B2 85 aa1.89□□□□□ -2.11
PTI1YGR156W RIB3Q99258 208 aa1.89□□□□□ -2.11
PTI1YGR156W RPL39P04650 51 aa1.88□□□□□ -2.11
PTI1YGR156W ROX3P25046 220 aa1.88□□□□□ -2.11
PTI1YGR156W AHT1P29589 182 aa1.88□□□□□ -2.11
PTI1YGR156W POP7P38291 140 aa1.88□□□□□ -2.11
PTI1YGR156W GPI2P46961 280 aa1.88□□□□□ -2.11
PTI1YGR156W YDL157CQ12082 118 aa1.88□□□□□ -2.11
PTI1YGR156W KIN28P06242 306 aa1.87□□□□□ -2.11
PTI1YGR156W AQY2P0CD90 149 aa1.87□□□□□ -2.11
PTI1YGR156W HYM1P32464 399 aa1.87□□□□□ -2.11
PTI1YGR156W YBR242WP38331 238 aa1.87□□□□□ -2.11
PTI1YGR156W TRS20P38334 175 aa1.87□□□□□ -2.11
PTI1YGR156W AVO2Q04749 426 aa1.87□□□□□ -2.11
PTI1YGR156W RRT7Q07829 113 aa1.87□□□□□ -2.11
PTI1YGR156W YOR289WQ12012 251 aaPredicted RBP1.87□□□□□ -2.11
PTI1YGR156W YGL041W-AP0C5N3 154 aa1.86□□□□□ -2.11
PTI1YGR156W YCR101CP25607 182 aa1.86□□□□□ -2.11
PTI1YGR156W MPC2P38857 129 aa1.86□□□□□ -2.11
PTI1YGR156W CIN5P40917 295 aa1.86□□□□□ -2.11
PTI1YGR156W YGL230CP53074 147 aa1.86□□□□□ -2.11
PTI1YGR156W YGL204CP53089 101 aa1.86□□□□□ -2.11
PTI1YGR156W NMA1Q06178 401 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 66.2 ms