RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C RRT13P40042 185 aa2.6□□□□□ -1.99
OTU1YFL044C YKE4P40544 346 aa2.6□□□□□ -1.99
OTU1YFL044C TMA23Q03525 211 aa2.6□□□□□ -1.99
OTU1YFL044C YMR253CQ04835 414 aa2.6□□□□□ -1.99
OTU1YFL044C RRT7Q07829 113 aa2.6□□□□□ -1.99
OTU1YFL044C YLR146W-AQ2V2P1 62 aa2.6□□□□□ -1.99
OTU1YFL044C QCR9P22289 66 aa2.59□□□□□ -1.99
OTU1YFL044C YEA4P40004 342 aa2.59□□□□□ -1.99
OTU1YFL044C DSK2P48510 373 aa2.59□□□□□ -1.99
OTU1YFL044C ARC18Q05933 178 aaKnown RBP2.59□□□□□ -1.99
OTU1YFL044C LCL2Q08045 131 aa2.59□□□□□ -1.99
OTU1YFL044C YAL067W-AQ8TGK6 75 aa2.59□□□□□ -1.99
OTU1YFL044C MRS1P07266 363 aa2.58□□□□□ -2
OTU1YFL044C HSP12P22943 109 aaKnown RBP2.58□□□□□ -2
OTU1YFL044C SCM4P32564 187 aa2.58□□□□□ -2
OTU1YFL044C NTF2P33331 125 aaKnown RBP2.58□□□□□ -2
OTU1YFL044C DER1P38307 211 aa2.58□□□□□ -2
OTU1YFL044C YDR366CP87287 132 aa2.58□□□□□ -2
OTU1YFL044C ECM19Q06011 112 aa2.58□□□□□ -2
OTU1YFL044C YLL066W-BQ8TGJ7 56 aa2.58□□□□□ -2
OTU1YFL044C ASP1P38986 381 aaPredicted RBP2.57□□□□□ -2
OTU1YFL044C SEC72P39742 193 aaKnown RBP2.57□□□□□ -2
OTU1YFL044C YGL118CP53132 145 aa2.57□□□□□ -2
OTU1YFL044C BRP1P53194 125 aa2.57□□□□□ -2
OTU1YFL044C TOM7P53507 60 aa2.57□□□□□ -2
OTU1YFL044C YMR007WQ03675 126 aa2.57□□□□□ -2
OTU1YFL044C AVO2Q04749 426 aa2.57□□□□□ -2
OTU1YFL044C FIT2Q08906 153 aa2.57□□□□□ -2
OTU1YFL044C DFM1Q12743 341 aaKnown RBP2.57□□□□□ -2
OTU1YFL044C YGL194C-AQ2V2P6 80 aa2.57□□□□□ -2
OTU1YFL044C RTC6O14464 93 aa2.56□□□□□ -2
OTU1YFL044C HTB2P02294 131 aa2.56□□□□□ -2
OTU1YFL044C RPL28P02406 149 aaKnown RBP2.56□□□□□ -2
OTU1YFL044C RPL27AP0C2H6 136 aaKnown RBP2.56□□□□□ -2
OTU1YFL044C RPL27BP0C2H7 136 aaKnown RBP2.56□□□□□ -2
OTU1YFL044C AHT1P29589 182 aa2.56□□□□□ -2
OTU1YFL044C YBR013CP38215 129 aa2.56□□□□□ -2
OTU1YFL044C NSE4P43124 402 aa2.56□□□□□ -2
OTU1YFL044C YJL028WP47062 111 aa2.56□□□□□ -2
OTU1YFL044C MGA1P53050 456 aa2.56□□□□□ -2
OTU1YFL044C SEN15Q04675 128 aa2.56□□□□□ -2
OTU1YFL044C YLR042CQ07990 161 aa2.56□□□□□ -2
OTU1YFL044C YOL085CQ99345 113 aa2.56□□□□□ -2
OTU1YFL044C ADH1P00330 348 aaKnown RBP2.55□□□□□ -2
OTU1YFL044C Q0255P03881 472 aa2.55□□□□□ -2
OTU1YFL044C COX10P21592 462 aa2.55□□□□□ -2
OTU1YFL044C GSP1P32835 219 aaKnown RBP2.55□□□□□ -2
OTU1YFL044C GSP2P32836 220 aaKnown RBP2.55□□□□□ -2
OTU1YFL044C YBL081WP38180 368 aaKnown RBP2.55□□□□□ -2
OTU1YFL044C AME1P38313 324 aa2.55□□□□□ -2
OTU1YFL044C EDC2P40023 145 aaPredicted RBP2.55□□□□□ -2
OTU1YFL044C YJR111CP47148 283 aaKnown RBP2.55□□□□□ -2
OTU1YFL044C YPR014CQ6B0W2 109 aa2.55□□□□□ -2
OTU1YFL044C CKS1P20486 150 aaKnown RBP2.54□□□□□ -2
OTU1YFL044C YHR173CP38864 112 aa2.54□□□□□ -2
OTU1YFL044C SNN1P48232 102 aa2.54□□□□□ -2
OTU1YFL044C ERV14P53173 138 aa2.54□□□□□ -2
OTU1YFL044C YGL034CP53186 121 aa2.54□□□□□ -2
OTU1YFL044C JAC1P53193 184 aa2.54□□□□□ -2
OTU1YFL044C DIA1P54005 336 aa2.54□□□□□ -2
OTU1YFL044C AIM34Q03673 198 aa2.54□□□□□ -2
OTU1YFL044C YLR342W-AQ3E810 57 aa2.54□□□□□ -2
OTU1YFL044C RPL33AP05744 107 aaKnown RBP2.53□□□□□ -2
OTU1YFL044C MRPL44P19956 98 aa2.53□□□□□ -2
OTU1YFL044C SPO13P23624 291 aa2.53□□□□□ -2
OTU1YFL044C MRPL28P36527 147 aa2.53□□□□□ -2
OTU1YFL044C SHG1P38337 142 aa2.53□□□□□ -2
OTU1YFL044C YBR292CP38357 123 aa2.53□□□□□ -2
OTU1YFL044C YNL217WP40152 326 aa2.53□□□□□ -2
OTU1YFL044C RPL33BP41056 107 aaKnown RBP2.53□□□□□ -2
OTU1YFL044C UBC12P52491 188 aa2.53□□□□□ -2
OTU1YFL044C ERI1P62651 68 aaKnown RBP2.53□□□□□ -2
OTU1YFL044C YCL001W-AP87012 153 aa2.53□□□□□ -2
OTU1YFL044C ZEO1Q08245 113 aa2.53□□□□□ -2
OTU1YFL044C FYV7Q12247 151 aa2.53□□□□□ -2
OTU1YFL044C YBR200W-AQ3E755 54 aa2.53□□□□□ -2
OTU1YFL044C YPR010C-AA5Z2X5 72 aa2.52□□□□□ -2.01
OTU1YFL044C TRS20P38334 175 aa2.52□□□□□ -2.01
OTU1YFL044C EMC5P40540 141 aa2.52□□□□□ -2.01
OTU1YFL044C HHO1P53551 258 aa2.52□□□□□ -2.01
OTU1YFL044C CWC27Q02770 301 aa2.52□□□□□ -2.01
OTU1YFL044C FCF2Q12035 217 aaPredicted RBP2.52□□□□□ -2.01
OTU1YFL044C YBL008W-AQ3E821 79 aa2.52□□□□□ -2.01
OTU1YFL044C PCC1Q3E833 88 aa2.52□□□□□ -2.01
OTU1YFL044C YDR034C-AP0C289 58 aa2.51□□□□□ -2.01
OTU1YFL044C SSS1P35179 80 aa2.51□□□□□ -2.01
OTU1YFL044C YMR141CP40211 102 aa2.51□□□□□ -2.01
OTU1YFL044C SMD3P43321 101 aaKnown RBP2.51□□□□□ -2.01
OTU1YFL044C RAV2Q03956 351 aa2.51□□□□□ -2.01
OTU1YFL044C UPS3Q04006 179 aa2.51□□□□□ -2.01
OTU1YFL044C ANT1Q06497 328 aa2.51□□□□□ -2.01
OTU1YFL044C YBL112CQ3E7Y4 105 aa2.51□□□□□ -2.01
OTU1YFL044C UBI4P0CG63 381 aaKnown RBP2.5□□□□□ -2.01
OTU1YFL044C NHP6AP11632 93 aaKnown RBP2.5□□□□□ -2.01
OTU1YFL044C PRE1P22141 198 aaKnown RBP2.5□□□□□ -2.01
OTU1YFL044C YCR023CP25351 611 aa2.5□□□□□ -2.01
OTU1YFL044C MOG1P47123 218 aa2.5□□□□□ -2.01
OTU1YFL044C OST3P48439 350 aa2.5□□□□□ -2.01
OTU1YFL044C DAD4P69851 72 aa2.5□□□□□ -2.01
OTU1YFL044C TVP18Q04767 167 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms