RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W NHP10Q03435 203 aa1.41□□□□□ -2.18
SEC4YFL005W YOS1Q3E834 85 aa1.41□□□□□ -2.18
SEC4YFL005W HUR1P45820 110 aa1.4□□□□□ -2.19
SEC4YFL005W YGL149WP53116 101 aa1.4□□□□□ -2.19
SEC4YFL005W YPL067CQ02754 198 aa1.4□□□□□ -2.19
SEC4YFL005W VAM10Q08474 114 aa1.4□□□□□ -2.19
SEC4YFL005W DAD1Q12248 94 aa1.4□□□□□ -2.19
SEC4YFL005W TY3B-IQ7LHG5 1498 aaKnown RBP1.39□□□□□ -2.19
SEC4YFL005W PFY1P07274 126 aa1.39□□□□□ -2.19
SEC4YFL005W FUN14P18411 198 aa1.39□□□□□ -2.19
SEC4YFL005W YIL014C-AQ02598 104 aa1.39□□□□□ -2.19
SEC4YFL005W YPL261CQ08976 102 aa1.39□□□□□ -2.19
SEC4YFL005W YOR376W-AQ3E805 51 aa1.39□□□□□ -2.19
SEC4YFL005W MHF1Q3E835 90 aa1.39□□□□□ -2.19
SEC4YFL005W LAA1P39526 2014 aa1.39□□□□□ -2.19
SEC4YFL005W GSC2P40989 1895 aa1.38□□□□□ -2.19
SEC4YFL005W UBC4P15731 148 aa1.38□□□□□ -2.19
SEC4YFL005W HSP150P32478 413 aa1.38□□□□□ -2.19
SEC4YFL005W EMP24P32803 203 aaKnown RBP1.38□□□□□ -2.19
SEC4YFL005W IPT1P38954 527 aa1.38□□□□□ -2.19
SEC4YFL005W YER187WP40102 141 aa1.38□□□□□ -2.19
SEC4YFL005W MIX14Q04341 121 aa1.38□□□□□ -2.19
SEC4YFL005W OST5Q92316 86 aa1.38□□□□□ -2.19
SEC4YFL005W LYS2P07702 1392 aa1.37□□□□□ -2.19
SEC4YFL005W ESC1Q03661 1658 aaKnown RBP1.37□□□□□ -2.19
SEC4YFL005W YJL197C-AP0C5P0 93 aa1.37□□□□□ -2.19
SEC4YFL005W YHL037CP38733 133 aa1.37□□□□□ -2.19
SEC4YFL005W HUA1P40325 198 aa1.37□□□□□ -2.19
SEC4YFL005W YFL051CP43552 160 aa1.37□□□□□ -2.19
SEC4YFL005W AVO2Q04749 426 aa1.37□□□□□ -2.19
SEC4YFL005W YLR296WQ05898 108 aa1.37□□□□□ -2.19
SEC4YFL005W HPA2Q06592 156 aa1.37□□□□□ -2.19
SEC4YFL005W RTC6O14464 93 aa1.36□□□□□ -2.19
SEC4YFL005W YHR213WP0CI67 198 aa1.36□□□□□ -2.19
SEC4YFL005W RPL37AP49166 88 aaKnown RBP1.36□□□□□ -2.19
SEC4YFL005W RSM19P53733 91 aaPredicted RBP1.36□□□□□ -2.19
SEC4YFL005W RPL22BP56628 122 aaKnown RBP1.36□□□□□ -2.19
SEC4YFL005W YCR075W-AQ3E830 75 aa1.36□□□□□ -2.19
SEC4YFL005W ROM2P51862 1356 aaKnown RBP1.35□□□□□ -2.19
SEC4YFL005W LTE1P07866 1435 aa1.35□□□□□ -2.19
SEC4YFL005W SRB6P32570 121 aa1.35□□□□□ -2.19
SEC4YFL005W YHR130CP38834 111 aa1.35□□□□□ -2.19
SEC4YFL005W SNN1P48232 102 aa1.35□□□□□ -2.19
SEC4YFL005W SED1Q01589 338 aa1.35□□□□□ -2.19
SEC4YFL005W IRC21Q04772 201 aa1.35□□□□□ -2.19
SEC4YFL005W CMC4Q3E7A9 73 aa1.35□□□□□ -2.19
SEC4YFL005W KSH1Q8TGJ3 72 aa1.35□□□□□ -2.19
SEC4YFL005W RPL33AP05744 107 aaKnown RBP1.34□□□□□ -2.19
SEC4YFL005W SRX1P36077 127 aa1.34□□□□□ -2.19
SEC4YFL005W SNU13P39990 126 aaKnown RBP1.34□□□□□ -2.19
SEC4YFL005W MSL1P40567 111 aaPredicted RBP1.34□□□□□ -2.19
SEC4YFL005W LCL2Q08045 131 aa1.34□□□□□ -2.19
SEC4YFL005W FIT3Q08907 204 aa1.34□□□□□ -2.19
SEC4YFL005W YLR363W-AQ3E747 85 aa1.34□□□□□ -2.19
SEC4YFL005W PCC1Q3E833 88 aa1.34□□□□□ -2.19
SEC4YFL005W MIC10Q96VH5 97 aa1.34□□□□□ -2.19
SEC4YFL005W RPA190P10964 1664 aaKnown RBP1.34□□□□□ -2.19
SEC4YFL005W RSF2P46974 1380 aa1.34□□□□□ -2.2
SEC4YFL005W ATG8P38182 117 aaRIP-Chip data1.33□□□□□ -2.2not detected
SEC4YFL005W YBR027CP38220 110 aa1.33□□□□□ -2.2
SEC4YFL005W YHL005CP38752 130 aa1.33□□□□□ -2.2
SEC4YFL005W YHR138CP38841 114 aaPredicted RBP1.33□□□□□ -2.2
SEC4YFL005W POR2P40478 281 aa1.33□□□□□ -2.2
SEC4YFL005W LST8P41318 303 aa1.33□□□□□ -2.2
SEC4YFL005W SUS1Q6WNK7 96 aa1.33□□□□□ -2.2
SEC4YFL005W PDR10P51533 1564 aa1.33□□□□□ -2.2
SEC4YFL005W TY4B-JP47024 1803 aa1.33□□□□□ -2.2
SEC4YFL005W YLR419WQ06698 1435 aaKnown RBP1.32□□□□□ -2.2
SEC4YFL005W YPK9Q12697 1472 aa1.32□□□□□ -2.2
SEC4YFL005W SEC7P11075 2009 aaKnown RBP1.32□□□□□ -2.2
SEC4YFL005W YGL014C-AP0C5N1 53 aa1.32□□□□□ -2.2
SEC4YFL005W EMC5P40540 141 aa1.32□□□□□ -2.2
SEC4YFL005W YDR029WQ12111 104 aa1.32□□□□□ -2.2
SEC4YFL005W YCL048W-AQ2V2Q2 79 aa1.32□□□□□ -2.2
SEC4YFL005W ECM12O13529 151 aa1.31□□□□□ -2.2
SEC4YFL005W PAU19P0CE85 124 aa1.31□□□□□ -2.2
SEC4YFL005W RPL40AP0CH08 128 aaKnown RBP1.31□□□□□ -2.2
SEC4YFL005W RPL40BP0CH09 128 aaKnown RBP1.31□□□□□ -2.2
SEC4YFL005W PAU3P25610 124 aa1.31□□□□□ -2.2
SEC4YFL005W GCV3P39726 170 aaPredicted RBP1.31□□□□□ -2.2
SEC4YFL005W YJL009WP47078 108 aa1.31□□□□□ -2.2
SEC4YFL005W PAU12P53343 120 aa1.31□□□□□ -2.2
SEC4YFL005W YMR122CQ03879 124 aa1.31□□□□□ -2.2
SEC4YFL005W YLR194CQ05777 254 aa1.31□□□□□ -2.2
SEC4YFL005W MLP1Q02455 1875 aaKnown RBP1.31□□□□□ -2.2
SEC4YFL005W BPT1P14772 1559 aa1.3□□□□□ -2.2
SEC4YFL005W HFA1P32874 2273 aa1.3□□□□□ -2.2
SEC4YFL005W RPL22AP05749 121 aaKnown RBP1.3□□□□□ -2.2
SEC4YFL005W COX23P38824 151 aa1.3□□□□□ -2.2
SEC4YFL005W YIR020CP40575 100 aa1.3□□□□□ -2.2
SEC4YFL005W ICS3P47034 131 aa1.3□□□□□ -2.2
SEC4YFL005W YMR082CQ04276 118 aa1.3□□□□□ -2.2
SEC4YFL005W YMR321CQ04898 105 aa1.3□□□□□ -2.2
SEC4YFL005W BRR2P32639 2163 aaKnown RBP1.3□□□□□ -2.2
SEC4YFL005W ESP1Q03018 1630 aa1.29□□□□□ -2.2
SEC4YFL005W PAU2P32612 120 aa1.29□□□□□ -2.2
SEC4YFL005W YAR064WP39563 99 aa1.29□□□□□ -2.2
SEC4YFL005W COA4Q05809 96 aa1.29□□□□□ -2.2
SEC4YFL005W YOR072WQ08486 104 aa1.29□□□□□ -2.2
SEC4YFL005W CCW12Q12127 133 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms