RNA–Protein interactions for RNA: YEL019C

MMS21, Transcript of SUMO ligase and component of the SMC5-SMC6 complex, yeast

Gene MMS21, Length 804 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MMS21	YEL019C	YGR042W	P53227	271 aa		0.7	□□□□□ -2.3
MMS21	YEL019C	LCL1	Q02786	101 aa		0.7	□□□□□ -2.3
MMS21	YEL019C	AUA1	P32450	94 aa		0.69	□□□□□ -2.3
MMS21	YEL019C	YGR240C-A	Q3E786	66 aa		0.69	□□□□□ -2.3
MMS21	YEL019C	YIL014C-A	Q02598	104 aa		0.68	□□□□□ -2.3
MMS21	YEL019C	TRM732	Q03496	1420 aa		0.68	□□□□□ -2.3
MMS21	YEL019C	RPS29B	P41058	56 aa	Known RBP	0.66	□□□□□ -2.3
MMS21	YEL019C	GPI19	Q04082	140 aa		0.66	□□□□□ -2.3
MMS21	YEL019C	YOR376W-A	Q3E805	51 aa		0.66	□□□□□ -2.3
MMS21	YEL019C	SAE3	P89114	91 aa		0.64	□□□□□ -2.31
MMS21	YEL019C	ARL3	Q02804	198 aa		0.64	□□□□□ -2.31
MMS21	YEL019C	YGL041C-B	Q3E750	60 aa		0.64	□□□□□ -2.31
MMS21	YEL019C	SNF11	P38956	169 aa		0.61	□□□□□ -2.31
MMS21	YEL019C	NKP2	Q06162	153 aa		0.61	□□□□□ -2.31
MMS21	YEL019C	YLR285C-A	Q3E771	56 aa		0.6	□□□□□ -2.31
MMS21	YEL019C	SLO1	Q3E784	85 aa		0.6	□□□□□ -2.31
MMS21	YEL019C	PAU12	P53343	120 aa		0.59	□□□□□ -2.31
MMS21	YEL019C	DYN2	Q02647	92 aa		0.59	□□□□□ -2.31
MMS21	YEL019C	SPC2	Q04969	178 aa		0.58	□□□□□ -2.32
MMS21	YEL019C	CYB5	P40312	120 aa		0.57	□□□□□ -2.32
MMS21	YEL019C	YEA6	P39953	335 aa		0.56	□□□□□ -2.32
MMS21	YEL019C	OST5	Q92316	86 aa		0.56	□□□□□ -2.32
MMS21	YEL019C	YDR010C	Q12426	110 aa		0.55	□□□□□ -2.32
MMS21	YEL019C	SNF2	P22082	1703 aa		0.55	□□□□□ -2.32
MMS21	YEL019C	COX23	P38824	151 aa		0.54	□□□□□ -2.32
MMS21	YEL019C	YPL261C	Q08976	102 aa		0.54	□□□□□ -2.32
MMS21	YEL019C	YRF1-3	P0CX14	1859 aa		0.54	□□□□□ -2.32
MMS21	YEL019C	YRF1-7	P0CX15	1859 aa		0.54	□□□□□ -2.32
MMS21	YEL019C	MRPS12	P53732	153 aa		0.53	□□□□□ -2.32
MMS21	YEL019C	MRP49	P32388	137 aa		0.52	□□□□□ -2.33
MMS21	YEL019C	POP7	P38291	140 aa		0.52	□□□□□ -2.33
MMS21	YEL019C	RAD50	P12753	1312 aa		0.52	□□□□□ -2.33
MMS21	YEL019C	YHR130C	P38834	111 aa		0.51	□□□□□ -2.33
MMS21	YEL019C	SEC16	P48415	2195 aa	Known RBP	0.51	□□□□□ -2.33
MMS21	YEL019C	TY1B-H	O13535	1793 aa		0.5	□□□□□ -2.33
MMS21	YEL019C	BNI1	P41832	1953 aa		0.49	□□□□□ -2.33
MMS21	YEL019C	VPS55	P47111	140 aa		0.49	□□□□□ -2.33
MMS21	YEL019C	FRQ1	Q06389	190 aa		0.49	□□□□□ -2.33
MMS21	YEL019C	PCC1	Q3E833	88 aa		0.49	□□□□□ -2.33
MMS21	YEL019C	BLM10	P43583	2143 aa		0.49	□□□□□ -2.33
MMS21	YEL019C	RPL22B	P56628	122 aa	Known RBP	0.48	□□□□□ -2.33
MMS21	YEL019C	SPC24	Q04477	213 aa		0.48	□□□□□ -2.33
MMS21	YEL019C	YLR363W-A	Q3E747	85 aa		0.48	□□□□□ -2.33
MMS21	YEL019C	ACP1	P32463	125 aa		0.47	□□□□□ -2.33
MMS21	YEL019C	YIR020C	P40575	100 aa		0.47	□□□□□ -2.33
MMS21	YEL019C	AIM11	P87275	137 aa		0.47	□□□□□ -2.33
MMS21	YEL019C	YLR118C	Q12354	227 aa		0.47	□□□□□ -2.33
MMS21	YEL019C	TDA2	P40045	126 aa		0.45	□□□□□ -2.34
MMS21	YEL019C	YOL164W-A	Q3E7A5	60 aa		0.45	□□□□□ -2.34
MMS21	YEL019C	RPB11	P38902	120 aa		0.44	□□□□□ -2.34
MMS21	YEL019C	YER187W	P40102	141 aa		0.44	□□□□□ -2.34
MMS21	YEL019C	MYO2	P19524	1574 aa	Known RBP	0.44	□□□□□ -2.34
MMS21	YEL019C	YPK9	Q12697	1472 aa		0.43	□□□□□ -2.34
MMS21	YEL019C	YCR099C	P25657	155 aa		0.43	□□□□□ -2.34
MMS21	YEL019C	VMA7	P39111	118 aa		0.43	□□□□□ -2.34
MMS21	YEL019C	SNN1	P48232	102 aa		0.43	□□□□□ -2.34
MMS21	YEL019C	YLR099W-A	Q3E798	87 aa		0.43	□□□□□ -2.34
MMS21	YEL019C	ECM5	Q03214	1411 aa		0.42	□□□□□ -2.34
MMS21	YEL019C	YBR072C-A	Q3E794	53 aa		0.42	□□□□□ -2.34
MMS21	YEL019C	PAU24	P38155	120 aa		0.41	□□□□□ -2.34
MMS21	YEL019C	YHR173C	P38864	112 aa		0.41	□□□□□ -2.34
MMS21	YEL019C	HMRA2	P0CY13	119 aa		0.4	□□□□□ -2.35
MMS21	YEL019C	YOR097C	Q12274	175 aa	Predicted RBP	0.4	□□□□□ -2.35
MMS21	YEL019C	PAU2	P32612	120 aa		0.38	□□□□□ -2.35
MMS21	YEL019C	DAD1	Q12248	94 aa		0.38	□□□□□ -2.35
MMS21	YEL019C	YLR255C	O13574	117 aa		0.35	□□□□□ -2.35
MMS21	YEL019C	DNA2	P38859	1522 aa		0.33	□□□□□ -2.36
MMS21	YEL019C	BRR2	P32639	2163 aa	Known RBP	0.33	□□□□□ -2.36
MMS21	YEL019C	GCV3	P39726	170 aa	Predicted RBP	0.32	□□□□□ -2.36
MMS21	YEL019C	YAR029W	P39549	74 aa		0.31	□□□□□ -2.36
MMS21	YEL019C	GTT1	P40582	234 aa		0.31	□□□□□ -2.36
MMS21	YEL019C	PAM16	P42949	149 aa		0.31	□□□□□ -2.36
MMS21	YEL019C	YCL048W-A	Q2V2Q2	79 aa		0.29	□□□□□ -2.36
MMS21	YEL019C	YLR365W	Q7LIF2	110 aa		0.29	□□□□□ -2.36
MMS21	YEL019C	PAU19	P0CE85	124 aa		0.28	□□□□□ -2.36
MMS21	YEL019C	PAU3	P25610	124 aa		0.28	□□□□□ -2.36
MMS21	YEL019C	YLR042C	Q07990	161 aa		0.27	□□□□□ -2.37
MMS21	YEL019C	LSM6	Q06406	86 aa	Known RBP	0.26	□□□□□ -2.37
MMS21	YEL019C	YIL086C	P40503	102 aa		0.25	□□□□□ -2.37
MMS21	YEL019C	SHU1	P38751	150 aa		0.24	□□□□□ -2.37
MMS21	YEL019C	YBR056W-A	I2HB52	66 aa		0.23	□□□□□ -2.37
MMS21	YEL019C	APS2	Q00381	147 aa		0.23	□□□□□ -2.37
MMS21	YEL019C	SEC7	P11075	2009 aa	Known RBP	0.21	□□□□□ -2.38
MMS21	YEL019C	CCW14	O13547	238 aa		0.2	□□□□□ -2.38
MMS21	YEL019C	ADK1	P07170	222 aa	Known RBP	0.2	□□□□□ -2.38
MMS21	YEL019C	YOL118C	Q08259	102 aa		0.2	□□□□□ -2.38
MMS21	YEL019C	RTR2	Q12378	196 aa		0.2	□□□□□ -2.38
MMS21	YEL019C	IMP2	P46972	177 aa		0.19	□□□□□ -2.38
MMS21	YEL019C	COX19	Q3E731	98 aa		0.19	□□□□□ -2.38
MMS21	YEL019C	RPA12	P32529	125 aa	Known RBP	0.18	□□□□□ -2.38
MMS21	YEL019C	TOP2	P06786	1428 aa	Known RBP	0.17	□□□□□ -2.38
MMS21	YEL019C	YNL190W	P53872	204 aa		0.17	□□□□□ -2.38
MMS21	YEL019C	YDR210W	Q03482	75 aa		0.17	□□□□□ -2.38
MMS21	YEL019C	WIP1	Q2V2P8	89 aa		0.17	□□□□□ -2.38
MMS21	YEL019C	FAS2	P19097	1887 aa	Known RBP	0.16	□□□□□ -2.38
MMS21	YEL019C	TY4B-H	P0C2J7	1802 aa		0.16	□□□□□ -2.38
MMS21	YEL019C	HUR1	P45820	110 aa		0.15	□□□□□ -2.39
MMS21	YEL019C	MPC2	P38857	129 aa		0.14	□□□□□ -2.39
MMS21	YEL019C	PAU15	P40585	124 aa		0.14	□□□□□ -2.39
MMS21	YEL019C	PAU16	P35994	123 aa		0.13	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms