RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W LDB18Q07887 179 aa0.53□□□□□ -2.32
RSM28YDR494W YLR042CQ07990 161 aa0.53□□□□□ -2.32
RSM28YDR494W FIT3Q08907 204 aa0.53□□□□□ -2.32
RSM28YDR494W HUG1Q6Q5K6 68 aa0.53□□□□□ -2.32
RSM28YDR494W RPL36BO14455 100 aaKnown RBP0.52□□□□□ -2.33
RSM28YDR494W RPL36AP05745 100 aaPredicted RBP0.52□□□□□ -2.33
RSM28YDR494W PFY1P07274 126 aa0.52□□□□□ -2.33
RSM28YDR494W TDA2P40045 126 aa0.52□□□□□ -2.33
RSM28YDR494W MPC1P53157 130 aaKnown RBP0.52□□□□□ -2.33
RSM28YDR494W AIM11P87275 137 aa0.52□□□□□ -2.33
RSM28YDR494W HPA2Q06592 156 aa0.52□□□□□ -2.33
RSM28YDR494W RPO41P13433 1351 aaKnown RBP0.52□□□□□ -2.33
RSM28YDR494W PAU2P32612 120 aa0.51□□□□□ -2.33
RSM28YDR494W EMP24P32803 203 aaKnown RBP0.51□□□□□ -2.33
RSM28YDR494W PAU24P38155 120 aa0.51□□□□□ -2.33
RSM28YDR494W YLR307C-AQ3E825 87 aa0.51□□□□□ -2.33
RSM28YDR494W ENV10Q99382 181 aa0.51□□□□□ -2.33
RSM28YDR494W COX23P38824 151 aa0.5□□□□□ -2.33
RSM28YDR494W CYB5P40312 120 aa0.5□□□□□ -2.33
RSM28YDR494W PAM16P42949 149 aa0.5□□□□□ -2.33
RSM28YDR494W APS2Q00381 147 aa0.5□□□□□ -2.33
RSM28YDR494W YPL261CQ08976 102 aa0.5□□□□□ -2.33
RSM28YDR494W YOR097CQ12274 175 aaPredicted RBP0.5□□□□□ -2.33
RSM28YDR494W YLR285C-AQ3E771 56 aa0.5□□□□□ -2.33
RSM28YDR494W PCC1Q3E833 88 aa0.5□□□□□ -2.33
RSM28YDR494W TY4B-JP47024 1803 aa0.5□□□□□ -2.33
RSM28YDR494W DNA2P38859 1522 aa0.49□□□□□ -2.33
RSM28YDR494W RPL22AP05749 121 aaKnown RBP0.49□□□□□ -2.33
RSM28YDR494W YJL197C-AP0C5P0 93 aa0.49□□□□□ -2.33
RSM28YDR494W YCR099CP25657 155 aa0.49□□□□□ -2.33
RSM28YDR494W LHP1P33399 275 aaKnown RBP0.49□□□□□ -2.33
RSM28YDR494W COA6Q3E846 104 aa0.49□□□□□ -2.33
RSM28YDR494W OST5Q92316 86 aa0.49□□□□□ -2.33
RSM28YDR494W MED11Q99278 115 aa0.49□□□□□ -2.33
RSM28YDR494W TY1B-HO13535 1793 aa0.49□□□□□ -2.33
RSM28YDR494W LAA1P39526 2014 aa0.48□□□□□ -2.33
RSM28YDR494W YOR304C-AO14468 76 aa0.48□□□□□ -2.33
RSM28YDR494W YER039C-AP0CD97 72 aa0.48□□□□□ -2.33
RSM28YDR494W HMRA2P0CY13 119 aa0.48□□□□□ -2.33
RSM28YDR494W MRPL31P14063 131 aaPredicted RBP0.48□□□□□ -2.33
RSM28YDR494W SRX1P36077 127 aa0.48□□□□□ -2.33
RSM28YDR494W YER187WP40102 141 aa0.48□□□□□ -2.33
RSM28YDR494W YIR020CP40575 100 aa0.48□□□□□ -2.33
RSM28YDR494W LCL1Q02786 101 aa0.48□□□□□ -2.33
RSM28YDR494W RUB1Q03919 77 aa0.48□□□□□ -2.33
RSM28YDR494W YOR034C-AQ3E735 80 aa0.48□□□□□ -2.33
RSM28YDR494W ECM5Q03214 1411 aa0.47□□□□□ -2.33
RSM28YDR494W YLR157W-EP0CF00 54 aa0.47□□□□□ -2.33
RSM28YDR494W POR2P40478 281 aa0.47□□□□□ -2.33
RSM28YDR494W SNN1P48232 102 aa0.47□□□□□ -2.33
RSM28YDR494W MRPS12P53732 153 aa0.47□□□□□ -2.33
RSM28YDR494W RPL22BP56628 122 aaKnown RBP0.47□□□□□ -2.33
RSM28YDR494W RTR2Q12378 196 aa0.47□□□□□ -2.33
RSM28YDR494W YIR021W-AQ3E739 70 aa0.47□□□□□ -2.33
RSM28YDR494W YGR240C-AQ3E786 66 aa0.47□□□□□ -2.33
RSM28YDR494W YRF1-3P0CX14 1859 aa0.47□□□□□ -2.33
RSM28YDR494W YRF1-7P0CX15 1859 aa0.47□□□□□ -2.33
RSM28YDR494W PAU19P0CE85 124 aa0.46□□□□□ -2.34
RSM28YDR494W PAU3P25610 124 aa0.46□□□□□ -2.34
RSM28YDR494W BUD23P25627 275 aaPredicted RBP0.46□□□□□ -2.34
RSM28YDR494W YEA6P39953 335 aa0.46□□□□□ -2.34
RSM28YDR494W VPS55P47111 140 aa0.46□□□□□ -2.34
RSM28YDR494W YMR321CQ04898 105 aa0.46□□□□□ -2.34
RSM28YDR494W DAD1Q12248 94 aa0.46□□□□□ -2.34
RSM28YDR494W YLR365WQ7LIF2 110 aa0.46□□□□□ -2.34
RSM28YDR494W SPP41P38904 1435 aa0.46□□□□□ -2.34
RSM28YDR494W YJR128WP47162 119 aa0.45□□□□□ -2.34
RSM28YDR494W ARL3Q02804 198 aa0.45□□□□□ -2.34
RSM28YDR494W OCA6Q12454 224 aa0.45□□□□□ -2.34
RSM28YDR494W YGL041C-BQ3E750 60 aa0.45□□□□□ -2.34
RSM28YDR494W YLR255CO13574 117 aa0.44□□□□□ -2.34
RSM28YDR494W AUA1P32450 94 aa0.44□□□□□ -2.34
RSM28YDR494W PAU16P35994 123 aa0.44□□□□□ -2.34
RSM28YDR494W YER137CP40083 148 aaKnown RBP0.44□□□□□ -2.34
RSM28YDR494W PAU15P40585 124 aa0.44□□□□□ -2.34
RSM28YDR494W ICS3P47034 131 aa0.44□□□□□ -2.34
RSM28YDR494W YLR363W-AQ3E747 85 aa0.44□□□□□ -2.34
RSM28YDR494W URB1P34241 1764 aaKnown RBP0.44□□□□□ -2.34
RSM28YDR494W URA2P07259 2214 aaKnown RBP0.44□□□□□ -2.34
RSM28YDR494W SEC16P48415 2195 aaKnown RBP0.43□□□□□ -2.34
RSM28YDR494W SNF2P22082 1703 aa0.42□□□□□ -2.34
RSM28YDR494W GTT1P40582 234 aa0.42□□□□□ -2.34
RSM28YDR494W LSM6Q06406 86 aaKnown RBP0.42□□□□□ -2.34
RSM28YDR494W MIC10Q96VH5 97 aa0.42□□□□□ -2.34
RSM28YDR494W GNA1P43577 159 aaPredicted RBP0.41□□□□□ -2.34
RSM28YDR494W HUR1P45820 110 aa0.41□□□□□ -2.34
RSM28YDR494W YMR103CQ04436 120 aa0.41□□□□□ -2.34
RSM28YDR494W LYS2P07702 1392 aa0.41□□□□□ -2.34
RSM28YDR494W KRE5P22023 1365 aa0.41□□□□□ -2.34
RSM28YDR494W SEC7P11075 2009 aaKnown RBP0.4□□□□□ -2.34
RSM28YDR494W YLR419WQ06698 1435 aaKnown RBP0.4□□□□□ -2.34
RSM28YDR494W RPS12P48589 143 aaKnown RBP0.4□□□□□ -2.35
RSM28YDR494W YPK9Q12697 1472 aa0.4□□□□□ -2.35
RSM28YDR494W YCR101CP25607 182 aa0.39□□□□□ -2.35
RSM28YDR494W YHR138CP38841 114 aaPredicted RBP0.39□□□□□ -2.35
RSM28YDR494W GCV3P39726 170 aaPredicted RBP0.39□□□□□ -2.35
RSM28YDR494W VMA21P41806 77 aa0.39□□□□□ -2.35
RSM28YDR494W PAU5P43575 122 aa0.39□□□□□ -2.35
RSM28YDR494W YGR164WP53291 111 aa0.39□□□□□ -2.35
RSM28YDR494W YDR210WQ03482 75 aa0.39□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms