RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C TY3B-IQ7LHG5 1498 aaKnown RBP3.66□□□□□ -1.82
VPS72YDR485C YEL008WP40001 126 aa3.66□□□□□ -1.82
VPS72YDR485C HUR1P45820 110 aa3.66□□□□□ -1.82
VPS72YDR485C MET31Q03081 177 aa3.66□□□□□ -1.82
VPS72YDR485C SEN15Q04675 128 aa3.66□□□□□ -1.82
VPS72YDR485C HRT1Q08273 121 aa3.66□□□□□ -1.82
VPS72YDR485C RRT15Q3E811 62 aa3.66□□□□□ -1.82
VPS72YDR485C PCC1Q3E833 88 aa3.66□□□□□ -1.82
VPS72YDR485C OST5Q92316 86 aa3.66□□□□□ -1.82
VPS72YDR485C COA6Q3E846 104 aa3.65□□□□□ -1.83
VPS72YDR485C TAR1Q8TGM6 124 aa3.65□□□□□ -1.83
VPS72YDR485C RSF2P46974 1380 aa3.65□□□□□ -1.83
VPS72YDR485C RSM19P53733 91 aaPredicted RBP3.64□□□□□ -1.83
VPS72YDR485C MHF1Q3E835 90 aa3.64□□□□□ -1.83
VPS72YDR485C PAU19P0CE85 124 aa3.63□□□□□ -1.83
VPS72YDR485C PAU3P25610 124 aa3.63□□□□□ -1.83
VPS72YDR485C MRPL11P36521 249 aaPredicted RBP3.63□□□□□ -1.83
VPS72YDR485C ATG8P38182 117 aaRIP-Chip data3.63□□□□□ -1.83not detected
VPS72YDR485C YIR020CP40575 100 aa3.63□□□□□ -1.83
VPS72YDR485C YLR296WQ05898 108 aa3.63□□□□□ -1.83
VPS72YDR485C SWC7Q06707 132 aa3.63□□□□□ -1.83
VPS72YDR485C FLO9P39712 1322 aa3.63□□□□□ -1.83
VPS72YDR485C HMRA1P0CY11 126 aa3.62□□□□□ -1.83
VPS72YDR485C COX23P38824 151 aa3.62□□□□□ -1.83
VPS72YDR485C EMC5P40540 141 aa3.62□□□□□ -1.83
VPS72YDR485C GSC2P40989 1895 aa3.61□□□□□ -1.83
VPS72YDR485C QCR8P08525 94 aa3.61□□□□□ -1.83
VPS72YDR485C SNN1P48232 102 aa3.61□□□□□ -1.83
VPS72YDR485C PDR10P51533 1564 aa3.61□□□□□ -1.83
VPS72YDR485C LAA1P39526 2014 aa3.61□□□□□ -1.83
VPS72YDR485C MSL1P40567 111 aaPredicted RBP3.61□□□□□ -1.83
VPS72YDR485C PRM7Q12459 698 aa3.6□□□□□ -1.83
VPS72YDR485C RPL36BO14455 100 aaKnown RBP3.6□□□□□ -1.83
VPS72YDR485C RPL36AP05745 100 aaPredicted RBP3.6□□□□□ -1.83
VPS72YDR485C RPL13BP40212 199 aaKnown RBP3.6□□□□□ -1.83
VPS72YDR485C ESC1Q03661 1658 aaKnown RBP3.59□□□□□ -1.83
VPS72YDR485C YPR096CO13587 100 aa3.59□□□□□ -1.84
VPS72YDR485C YGL014C-AP0C5N1 53 aa3.58□□□□□ -1.84
VPS72YDR485C VMA21P41806 77 aa3.58□□□□□ -1.84
VPS72YDR485C RPL22BP56628 122 aaKnown RBP3.58□□□□□ -1.84
VPS72YDR485C LTE1P07866 1435 aa3.58□□□□□ -1.84
VPS72YDR485C YJL197C-AP0C5P0 93 aa3.58□□□□□ -1.84
VPS72YDR485C SRX1P36077 127 aa3.58□□□□□ -1.84
VPS72YDR485C CYR1P08678 2026 aaKnown RBP3.57□□□□□ -1.84
VPS72YDR485C PAU16P35994 123 aa3.57□□□□□ -1.84
VPS72YDR485C PAU15P40585 124 aa3.57□□□□□ -1.84
VPS72YDR485C YMR082CQ04276 118 aa3.57□□□□□ -1.84
VPS72YDR485C MIX14Q04341 121 aa3.57□□□□□ -1.84
VPS72YDR485C YLR162WQ06235 118 aa3.57□□□□□ -1.84
VPS72YDR485C HPA2Q06592 156 aa3.57□□□□□ -1.84
VPS72YDR485C MYO1P08964 1928 aa3.57□□□□□ -1.84
VPS72YDR485C YHR213WP0CI67 198 aa3.56□□□□□ -1.84
VPS72YDR485C YSP2Q06681 1438 aa3.56□□□□□ -1.84
VPS72YDR485C AIM4P38305 123 aaPredicted RBP3.56□□□□□ -1.84
VPS72YDR485C ACC1Q00955 2233 aaKnown RBP3.56□□□□□ -1.84
VPS72YDR485C YBR219CP38317 127 aa3.55□□□□□ -1.84
VPS72YDR485C YHR086W-AQ3E746 53 aa3.55□□□□□ -1.84
VPS72YDR485C SEC7P11075 2009 aaKnown RBP3.55□□□□□ -1.84
VPS72YDR485C YBR027CP38220 110 aa3.53□□□□□ -1.84
VPS72YDR485C HMRA2P0CY13 119 aa3.53□□□□□ -1.84
VPS72YDR485C GIS2P53849 153 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
VPS72YDR485C ECM12O13529 151 aa3.52□□□□□ -1.85
VPS72YDR485C TY1B-PR2P0C2J0 1756 aa3.52□□□□□ -1.85
VPS72YDR485C LST8P41318 303 aa3.52□□□□□ -1.85
VPS72YDR485C RGM1Q00453 211 aa3.52□□□□□ -1.85
VPS72YDR485C YLR285C-AQ3E771 56 aa3.51□□□□□ -1.85
VPS72YDR485C PAU5P43575 122 aa3.51□□□□□ -1.85
VPS72YDR485C PRM3Q08931 133 aa3.51□□□□□ -1.85
VPS72YDR485C COA3Q3E7B2 85 aa3.51□□□□□ -1.85
VPS72YDR485C NRG2P38082 220 aa3.5□□□□□ -1.85
VPS72YDR485C RPL33AP05744 107 aaKnown RBP3.49□□□□□ -1.85
VPS72YDR485C SED1Q01589 338 aa3.49□□□□□ -1.85
VPS72YDR485C VAM10Q08474 114 aa3.49□□□□□ -1.85
VPS72YDR485C YCL042WP25572 119 aa3.49□□□□□ -1.85
VPS72YDR485C CYB5P40312 120 aa3.48□□□□□ -1.85
VPS72YDR485C YDR042CQ03205 200 aa3.48□□□□□ -1.85
VPS72YDR485C RPA190P10964 1664 aaKnown RBP3.48□□□□□ -1.85
VPS72YDR485C YHR138CP38841 114 aaPredicted RBP3.48□□□□□ -1.85
VPS72YDR485C YMR122CQ03879 124 aa3.48□□□□□ -1.85
VPS72YDR485C POR2P40478 281 aa3.47□□□□□ -1.85
VPS72YDR485C RPS22AP0C0W1 130 aaKnown RBP3.46□□□□□ -1.86
VPS72YDR485C YNL146C-AQ3E7Z1 64 aa3.46□□□□□ -1.86
VPS72YDR485C DNA2P38859 1522 aa3.45□□□□□ -1.86
VPS72YDR485C GCV3P39726 170 aaPredicted RBP3.45□□□□□ -1.86
VPS72YDR485C YIL163CP40448 117 aa3.44□□□□□ -1.86
VPS72YDR485C CWP2P43497 92 aa3.44□□□□□ -1.86
VPS72YDR485C COA4Q05809 96 aa3.44□□□□□ -1.86
VPS72YDR485C YLR419WQ06698 1435 aaKnown RBP3.43□□□□□ -1.86
VPS72YDR485C SRB6P32570 121 aa3.43□□□□□ -1.86
VPS72YDR485C SUS1Q6WNK7 96 aa3.43□□□□□ -1.86
VPS72YDR485C YFL065CP43539 102 aa3.43□□□□□ -1.86
VPS72YDR485C YLR363W-AQ3E747 85 aa3.43□□□□□ -1.86
VPS72YDR485C RPL22AP05749 121 aaKnown RBP3.42□□□□□ -1.86
VPS72YDR485C PFY1P07274 126 aa3.41□□□□□ -1.86
VPS72YDR485C YSF3P0C074 85 aaPredicted RBP3.41□□□□□ -1.86
VPS72YDR485C ROX3P25046 220 aa3.4□□□□□ -1.86
VPS72YDR485C UBR2Q07963 1872 aa3.4□□□□□ -1.86
VPS72YDR485C ROM2P51862 1356 aaKnown RBP3.4□□□□□ -1.87
VPS72YDR485C LSM6Q06406 86 aaKnown RBP3.39□□□□□ -1.87
VPS72YDR485C ICY1Q04329 127 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms