RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SDC1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC1YDR469W KSH1Q8TGJ3 72 aa1.35□□□□□ -2.19
SDC1YDR469W TAR1Q8TGM6 124 aa1.35□□□□□ -2.19
SDC1YDR469W OST5Q92316 86 aa1.35□□□□□ -2.19
SDC1YDR469W MRPL11P36521 249 aaPredicted RBP1.34□□□□□ -2.19
SDC1YDR469W YHR130CP38834 111 aa1.34□□□□□ -2.19
SDC1YDR469W YIR020CP40575 100 aa1.34□□□□□ -2.19
SDC1YDR469W PAU12P53343 120 aa1.34□□□□□ -2.19
SDC1YDR469W SED1Q01589 338 aa1.34□□□□□ -2.19
SDC1YDR469W YLR162WQ06235 118 aa1.34□□□□□ -2.19
SDC1YDR469W YOS1Q3E834 85 aa1.34□□□□□ -2.19
SDC1YDR469W MIC10Q96VH5 97 aa1.34□□□□□ -2.19
SDC1YDR469W YHR213WP0CI67 198 aa1.33□□□□□ -2.2
SDC1YDR469W PRE1P22141 198 aaKnown RBP1.33□□□□□ -2.2
SDC1YDR469W YBR027CP38220 110 aa1.33□□□□□ -2.2
SDC1YDR469W GTT1P40582 234 aa1.33□□□□□ -2.2
SDC1YDR469W VAM10Q08474 114 aa1.33□□□□□ -2.2
SDC1YDR469W YNL146C-AQ3E7Z1 64 aa1.33□□□□□ -2.2
SDC1YDR469W UBR2Q07963 1872 aa1.33□□□□□ -2.2
SDC1YDR469W ESC1Q03661 1658 aaKnown RBP1.32□□□□□ -2.2
SDC1YDR469W YGL014C-AP0C5N1 53 aa1.32□□□□□ -2.2
SDC1YDR469W LST8P41318 303 aa1.32□□□□□ -2.2
SDC1YDR469W MIX14Q04341 121 aa1.32□□□□□ -2.2
SDC1YDR469W DAD1Q12248 94 aa1.32□□□□□ -2.2
SDC1YDR469W YCR075W-AQ3E830 75 aa1.32□□□□□ -2.2
SDC1YDR469W BPT1P14772 1559 aa1.32□□□□□ -2.2
SDC1YDR469W RPL36BO14455 100 aaKnown RBP1.31□□□□□ -2.2
SDC1YDR469W RPL36AP05745 100 aaPredicted RBP1.31□□□□□ -2.2
SDC1YDR469W PAU2P32612 120 aa1.31□□□□□ -2.2
SDC1YDR469W YIL014C-AQ02598 104 aa1.31□□□□□ -2.2
SDC1YDR469W RPL33AP05744 107 aaKnown RBP1.3□□□□□ -2.2
SDC1YDR469W PFY1P07274 126 aa1.3□□□□□ -2.2
SDC1YDR469W VMA21P41806 77 aa1.3□□□□□ -2.2
SDC1YDR469W RPL22BP56628 122 aaKnown RBP1.3□□□□□ -2.2
SDC1YDR469W YMR122CQ03879 124 aa1.3□□□□□ -2.2
SDC1YDR469W YLR194CQ05777 254 aa1.3□□□□□ -2.2
SDC1YDR469W COA3Q3E7B2 85 aa1.3□□□□□ -2.2
SDC1YDR469W MHF1Q3E835 90 aa1.3□□□□□ -2.2
SDC1YDR469W MYO1P08964 1928 aa1.3□□□□□ -2.2
SDC1YDR469W LTE1P07866 1435 aa1.3□□□□□ -2.2
SDC1YDR469W YSP2Q06681 1438 aa1.3□□□□□ -2.2
SDC1YDR469W YLR419WQ06698 1435 aaKnown RBP1.3□□□□□ -2.2
SDC1YDR469W RPA190P10964 1664 aaKnown RBP1.29□□□□□ -2.2
SDC1YDR469W PAU24P38155 120 aa1.29□□□□□ -2.2
SDC1YDR469W COX23P38824 151 aa1.29□□□□□ -2.2
SDC1YDR469W RPL13BP40212 199 aaKnown RBP1.29□□□□□ -2.2
SDC1YDR469W POR2P40478 281 aa1.29□□□□□ -2.2
SDC1YDR469W RSF2P46974 1380 aa1.29□□□□□ -2.2
SDC1YDR469W ROM2P51862 1356 aaKnown RBP1.29□□□□□ -2.2
SDC1YDR469W SRX1P36077 127 aa1.28□□□□□ -2.2
SDC1YDR469W SNN1P48232 102 aa1.28□□□□□ -2.2
SDC1YDR469W YMR082CQ04276 118 aa1.28□□□□□ -2.2
SDC1YDR469W FIT3Q08907 204 aa1.28□□□□□ -2.2
SDC1YDR469W PRM3Q08931 133 aa1.28□□□□□ -2.2
SDC1YDR469W PCC1Q3E833 88 aa1.28□□□□□ -2.2
SDC1YDR469W COA6Q3E846 104 aa1.28□□□□□ -2.2
SDC1YDR469W PAU19P0CE85 124 aa1.27□□□□□ -2.21
SDC1YDR469W YGL010WP25338 174 aa1.27□□□□□ -2.21
SDC1YDR469W PAU3P25610 124 aa1.27□□□□□ -2.21
SDC1YDR469W ATG8P38182 117 aaRIP-Chip data1.27□□□□□ -2.21not detected
SDC1YDR469W AIM4P38305 123 aaPredicted RBP1.27□□□□□ -2.21
SDC1YDR469W SNU13P39990 126 aaKnown RBP1.27□□□□□ -2.21
SDC1YDR469W SCP1Q08873 200 aa1.27□□□□□ -2.21
SDC1YDR469W YGL194C-AQ2V2P6 80 aa1.27□□□□□ -2.21
SDC1YDR469W YHR212W-AP0CX91 67 aa1.26□□□□□ -2.21
SDC1YDR469W YBR242WP38331 238 aa1.26□□□□□ -2.21
SDC1YDR469W NHP10Q03435 203 aa1.26□□□□□ -2.21
SDC1YDR469W COA4Q05809 96 aa1.26□□□□□ -2.21
SDC1YDR469W HPA2Q06592 156 aa1.26□□□□□ -2.21
SDC1YDR469W LAA1P39526 2014 aa1.26□□□□□ -2.21
SDC1YDR469W DNA2P38859 1522 aa1.25□□□□□ -2.21
SDC1YDR469W SLH1P53327 1967 aaKnown RBP1.25□□□□□ -2.21
SDC1YDR469W YHL005CP38752 130 aa1.25□□□□□ -2.21
SDC1YDR469W YFL065CP43539 102 aa1.25□□□□□ -2.21
SDC1YDR469W RSM19P53733 91 aaPredicted RBP1.25□□□□□ -2.21
SDC1YDR469W SEN15Q04675 128 aa1.25□□□□□ -2.21
SDC1YDR469W RRT15Q3E811 62 aa1.25□□□□□ -2.21
SDC1YDR469W YKL068W-AQ3E826 78 aa1.25□□□□□ -2.21
SDC1YDR469W HFA1P32874 2273 aa1.25□□□□□ -2.21
SDC1YDR469W SEC7P11075 2009 aaKnown RBP1.25□□□□□ -2.21
SDC1YDR469W TY1B-PR2P0C2J0 1756 aa1.24□□□□□ -2.21
SDC1YDR469W YSF3P0C074 85 aaPredicted RBP1.24□□□□□ -2.21
SDC1YDR469W PAU16P35994 123 aa1.24□□□□□ -2.21
SDC1YDR469W YHL037CP38733 133 aa1.24□□□□□ -2.21
SDC1YDR469W YIL163CP40448 117 aa1.24□□□□□ -2.21
SDC1YDR469W EMC5P40540 141 aa1.24□□□□□ -2.21
SDC1YDR469W MSL1P40567 111 aaPredicted RBP1.24□□□□□ -2.21
SDC1YDR469W PAU15P40585 124 aa1.24□□□□□ -2.21
SDC1YDR469W YDR029WQ12111 104 aa1.24□□□□□ -2.21
SDC1YDR469W TY4B-JP47024 1803 aa1.24□□□□□ -2.21
SDC1YDR469W YPK9Q12697 1472 aa1.24□□□□□ -2.21
SDC1YDR469W RPL22AP05749 121 aaKnown RBP1.23□□□□□ -2.21
SDC1YDR469W HMRA1P0CY11 126 aa1.23□□□□□ -2.21
SDC1YDR469W YHR138CP38841 114 aaPredicted RBP1.23□□□□□ -2.21
SDC1YDR469W YNL122CP53921 115 aaPredicted RBP1.23□□□□□ -2.21
SDC1YDR469W YDR042CQ03205 200 aa1.23□□□□□ -2.21
SDC1YDR469W YMR321CQ04898 105 aa1.23□□□□□ -2.21
SDC1YDR469W YCL048W-AQ2V2Q2 79 aa1.23□□□□□ -2.21
SDC1YDR469W YLR363W-AQ3E747 85 aa1.23□□□□□ -2.21
SDC1YDR469W SWR1Q05471 1514 aa1.22□□□□□ -2.21
SDC1YDR469W ICS3P47034 131 aa1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms