RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C YHR140WP38842 239 aa1.39□□□□□ -2.19
LSM6YDR378C EMC4P53073 190 aa1.39□□□□□ -2.19
LSM6YDR378C KTI11Q3E840 82 aa1.39□□□□□ -2.19
LSM6YDR378C RPO21P04050 1733 aaKnown RBP1.39□□□□□ -2.19
LSM6YDR378C TY3B-GQ99315 1547 aa1.39□□□□□ -2.19
LSM6YDR378C SNT2P53127 1403 aa1.39□□□□□ -2.19
LSM6YDR378C SPO14P36126 1683 aa1.39□□□□□ -2.19
LSM6YDR378C POL1P13382 1468 aa1.38□□□□□ -2.19
LSM6YDR378C FUN14P18411 198 aa1.38□□□□□ -2.19
LSM6YDR378C RPS1AP33442 255 aaKnown RBP1.38□□□□□ -2.19
LSM6YDR378C YPL067CQ02754 198 aa1.38□□□□□ -2.19
LSM6YDR378C YDR034W-BQ6Q5X2 51 aa1.38□□□□□ -2.19
LSM6YDR378C TY1B-DR3Q99231 1755 aa1.38□□□□□ -2.19
LSM6YDR378C YMR141CP40211 102 aa1.37□□□□□ -2.19
LSM6YDR378C BRP1P53194 125 aa1.37□□□□□ -2.19
LSM6YDR378C COA4Q05809 96 aa1.37□□□□□ -2.19
LSM6YDR378C PRM3Q08931 133 aa1.37□□□□□ -2.19
LSM6YDR378C TSC11P40061 1430 aa1.37□□□□□ -2.19
LSM6YDR378C TY1B-JR2P47100 1755 aaKnown RBP1.36□□□□□ -2.19
LSM6YDR378C TY1B-ER2Q03619 1755 aa1.36□□□□□ -2.19
LSM6YDR378C TY1B-MR1Q04214 1755 aa1.36□□□□□ -2.19
LSM6YDR378C TY1B-MR2Q04670 1755 aaKnown RBP1.36□□□□□ -2.19
LSM6YDR378C TY1B-LR1Q12088 1755 aaKnown RBP1.36□□□□□ -2.19
LSM6YDR378C TY1B-NL1Q12112 1755 aa1.36□□□□□ -2.19
LSM6YDR378C TY1B-GR1Q12141 1755 aa1.36□□□□□ -2.19
LSM6YDR378C TY1B-BLQ12490 1755 aa1.36□□□□□ -2.19
LSM6YDR378C COA6Q3E846 104 aa1.36□□□□□ -2.19
LSM6YDR378C STU1P38198 1513 aa1.35□□□□□ -2.19
LSM6YDR378C PFY1P07274 126 aa1.34□□□□□ -2.19
LSM6YDR378C QCR10P37299 77 aa1.34□□□□□ -2.19
LSM6YDR378C YPR117WQ06116 2489 aa1.33□□□□□ -2.2
LSM6YDR378C MYO4P32492 1471 aa1.33□□□□□ -2.2
LSM6YDR378C BCK1Q01389 1478 aa1.33□□□□□ -2.2
LSM6YDR378C RPL40AP0CH08 128 aaKnown RBP1.33□□□□□ -2.2
LSM6YDR378C RPL40BP0CH09 128 aaKnown RBP1.33□□□□□ -2.2
LSM6YDR378C YGL149WP53116 101 aa1.33□□□□□ -2.2
LSM6YDR378C KRE5P22023 1365 aa1.33□□□□□ -2.2
LSM6YDR378C HAP1P0CE41 1502 aa1.32□□□□□ -2.2
LSM6YDR378C VTH1P40438 1549 aa1.32□□□□□ -2.2
LSM6YDR378C VTH2P40890 1549 aa1.32□□□□□ -2.2
LSM6YDR378C UTP11P34247 250 aaPredicted RBP1.32□□□□□ -2.2
LSM6YDR378C HPM1P40481 377 aa1.32□□□□□ -2.2
LSM6YDR378C MRPL11P36521 249 aaPredicted RBP1.31□□□□□ -2.2
LSM6YDR378C YBT1P32386 1661 aa1.31□□□□□ -2.2
LSM6YDR378C YRF1-2P40105 1681 aa1.3□□□□□ -2.2
LSM6YDR378C YCR050CP25630 102 aa1.3□□□□□ -2.2
LSM6YDR378C MVB12P42939 101 aa1.3□□□□□ -2.2
LSM6YDR378C CSN9Q03981 162 aa1.3□□□□□ -2.2
LSM6YDR378C SDH7Q04401 133 aa1.3□□□□□ -2.2
LSM6YDR378C GCN2P15442 1659 aa1.29□□□□□ -2.2
LSM6YDR378C HAP3P13434 144 aa1.29□□□□□ -2.2
LSM6YDR378C YLR296WQ05898 108 aa1.29□□□□□ -2.2
LSM6YDR378C FIT3Q08907 204 aa1.29□□□□□ -2.2
LSM6YDR378C SNQ2P32568 1501 aaKnown RBP1.29□□□□□ -2.2
LSM6YDR378C PDR5P33302 1511 aaKnown RBP1.29□□□□□ -2.2
LSM6YDR378C RPL14AP36105 138 aaKnown RBP1.28□□□□□ -2.2
LSM6YDR378C RPL14BP38754 138 aaKnown RBP1.28□□□□□ -2.2
LSM6YDR378C ELC1Q03071 99 aa1.28□□□□□ -2.2
LSM6YDR378C SMC4Q12267 1418 aa1.28□□□□□ -2.2
LSM6YDR378C TY3B-IQ7LHG5 1498 aaKnown RBP1.28□□□□□ -2.2
LSM6YDR378C SEC7P11075 2009 aaKnown RBP1.28□□□□□ -2.2
LSM6YDR378C VMR1P38735 1592 aa1.27□□□□□ -2.21
LSM6YDR378C IML1P47170 1584 aa1.27□□□□□ -2.21
LSM6YDR378C HSP10P38910 106 aa1.27□□□□□ -2.21
LSM6YDR378C YAL064WP39711 94 aa1.27□□□□□ -2.21
LSM6YDR378C HUG1Q6Q5K6 68 aa1.27□□□□□ -2.21
LSM6YDR378C IRA1P18963 3092 aa1.27□□□□□ -2.21
LSM6YDR378C PRP8P33334 2413 aaKnown RBP1.27□□□□□ -2.21
LSM6YDR378C RPL43AP0CX25 92 aaKnown RBP1.26□□□□□ -2.21
LSM6YDR378C RPL43BP0CX26 92 aa1.26□□□□□ -2.21
LSM6YDR378C MLP2P40457 1679 aa1.26□□□□□ -2.21
LSM6YDR378C PDR12Q02785 1511 aa1.25□□□□□ -2.21
LSM6YDR378C CAT8P39113 1433 aa1.25□□□□□ -2.21
LSM6YDR378C GEA1P47102 1408 aaPredicted RBP1.25□□□□□ -2.21
LSM6YDR378C PAU21P0CE86 164 aa1.25□□□□□ -2.21
LSM6YDR378C PAU22P0CE87 164 aa1.25□□□□□ -2.21
LSM6YDR378C GTT2Q12390 233 aa1.25□□□□□ -2.21
LSM6YDR378C YNL277W-AQ3E7Z0 62 aa1.25□□□□□ -2.21
LSM6YDR378C SRB8P25648 1427 aa1.24□□□□□ -2.21
LSM6YDR378C RSF2P46974 1380 aa1.24□□□□□ -2.21
LSM6YDR378C CHC1P22137 1653 aaKnown RBP1.24□□□□□ -2.21
LSM6YDR378C NUP188P52593 1655 aaKnown RBP1.24□□□□□ -2.21
LSM6YDR378C TEL1P38110 2787 aa1.24□□□□□ -2.21
LSM6YDR378C AIM4P38305 123 aaPredicted RBP1.24□□□□□ -2.21
LSM6YDR378C CYC2P38909 366 aa1.24□□□□□ -2.21
LSM6YDR378C YGR017WP53210 297 aa1.24□□□□□ -2.21
LSM6YDR378C ATP14Q12349 124 aa1.24□□□□□ -2.21
LSM6YDR378C YSF3P0C074 85 aaPredicted RBP1.23□□□□□ -2.21
LSM6YDR378C YBR013CP38215 129 aa1.23□□□□□ -2.21
LSM6YDR378C GIM4P40005 111 aaKnown RBP1.23□□□□□ -2.21
LSM6YDR378C MIC27P50945 234 aa1.23□□□□□ -2.21
LSM6YDR378C MPC1P53157 130 aaKnown RBP1.23□□□□□ -2.21
LSM6YDR378C TY1B-NL2Q99337 1749 aaKnown RBP1.23□□□□□ -2.21
LSM6YDR378C TOR1P35169 2470 aa1.22□□□□□ -2.21
LSM6YDR378C RTC6O14464 93 aa1.22□□□□□ -2.21
LSM6YDR378C PRS3P38689 320 aaKnown RBP1.22□□□□□ -2.21
LSM6YDR378C AIM18P38884 321 aa1.22□□□□□ -2.21
LSM6YDR378C PHS1P40857 217 aa1.22□□□□□ -2.21
LSM6YDR378C TVP18Q04767 167 aa1.22□□□□□ -2.21
LSM6YDR378C LDB18Q07887 179 aa1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms