RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C ERV14P53173 138 aa3.01□□□□□ -1.93
CDC9YDL164C GRX5Q02784 150 aa3.01□□□□□ -1.93
CDC9YDL164C YPR174CQ06616 221 aaPredicted RBP3.01□□□□□ -1.93
CDC9YDL164C RPL13AQ12690 199 aaPredicted RBP3.01□□□□□ -1.93
CDC9YDL164C MHF1Q3E835 90 aa3.01□□□□□ -1.93
CDC9YDL164C SNF11P38956 169 aa3□□□□□ -1.93
CDC9YDL164C IRC19Q07843 230 aa3□□□□□ -1.93
CDC9YDL164C SLH1P53327 1967 aaKnown RBP3□□□□□ -1.93
CDC9YDL164C YLR236CA0A023PZG4 107 aa3□□□□□ -1.93
CDC9YDL164C MRPL15P36523 253 aa3□□□□□ -1.93
CDC9YDL164C YBR090CP38253 122 aa3□□□□□ -1.93
CDC9YDL164C KNH1P50112 268 aa3□□□□□ -1.93
CDC9YDL164C ATG41Q12048 136 aa3□□□□□ -1.93
CDC9YDL164C MSB2P32334 1306 aa2.99□□□□□ -1.93
CDC9YDL164C SRB6P32570 121 aa2.99□□□□□ -1.93
CDC9YDL164C YEL067CP39978 195 aa2.99□□□□□ -1.93
CDC9YDL164C THG1P53215 237 aaKnown RBP2.99□□□□□ -1.93
CDC9YDL164C GPI11Q06636 219 aa2.99□□□□□ -1.93
CDC9YDL164C HYP2P23301 157 aaKnown RBP2.99□□□□□ -1.93
CDC9YDL164C FYV5P25585 152 aa2.99□□□□□ -1.93
CDC9YDL164C YEA6P39953 335 aa2.99□□□□□ -1.93
CDC9YDL164C YHP1Q04116 353 aa2.99□□□□□ -1.93
CDC9YDL164C RRT7Q07829 113 aa2.99□□□□□ -1.93
CDC9YDL164C PCC1Q3E833 88 aa2.99□□□□□ -1.93
CDC9YDL164C MRPL44P19956 98 aa2.98□□□□□ -1.93
CDC9YDL164C YEL045CP32616 141 aa2.98□□□□□ -1.93
CDC9YDL164C YFL012WP43580 148 aa2.98□□□□□ -1.93
CDC9YDL164C YFR035CP43608 114 aa2.98□□□□□ -1.93
CDC9YDL164C SNN1P48232 102 aa2.98□□□□□ -1.93
CDC9YDL164C YPR195CQ06594 109 aa2.98□□□□□ -1.93
CDC9YDL164C YMR030W-AQ3E760 96 aa2.98□□□□□ -1.93
CDC9YDL164C CDC39P25655 2108 aaKnown RBP2.98□□□□□ -1.93
CDC9YDL164C RAS2P01120 322 aaKnown RBP2.98□□□□□ -1.93
CDC9YDL164C EMP24P32803 203 aaKnown RBP2.98□□□□□ -1.93
CDC9YDL164C SPO73P40031 143 aa2.98□□□□□ -1.93
CDC9YDL164C FLX1P40464 311 aa2.98□□□□□ -1.93
CDC9YDL164C SOM1Q05676 74 aa2.98□□□□□ -1.93
CDC9YDL164C CMC4Q3E7A9 73 aa2.98□□□□□ -1.93
CDC9YDL164C SUS1Q6WNK7 96 aa2.98□□□□□ -1.93
CDC9YDL164C AGA2P32781 87 aa2.97□□□□□ -1.93
CDC9YDL164C YPR013CQ12145 317 aa2.97□□□□□ -1.93
CDC9YDL164C YRF1-3P0CX14 1859 aa2.96□□□□□ -1.93
CDC9YDL164C YRF1-7P0CX15 1859 aa2.96□□□□□ -1.93
CDC9YDL164C YRF1-6P53819 1859 aa2.96□□□□□ -1.93
CDC9YDL164C HAP3P13434 144 aa2.96□□□□□ -1.93
CDC9YDL164C RPL33BP41056 107 aaKnown RBP2.96□□□□□ -1.93
CDC9YDL164C ATG40Q99325 256 aa2.96□□□□□ -1.93
CDC9YDL164C HKR1P41809 1802 aa2.96□□□□□ -1.94
CDC9YDL164C SSS1P35179 80 aa2.96□□□□□ -1.94
CDC9YDL164C YHL018WP38744 120 aaPredicted RBP2.96□□□□□ -1.94
CDC9YDL164C YHR130CP38834 111 aa2.96□□□□□ -1.94
CDC9YDL164C MPC1P53157 130 aaKnown RBP2.96□□□□□ -1.94
CDC9YDL164C UPS3Q04006 179 aa2.96□□□□□ -1.94
CDC9YDL164C MHF2Q3E829 80 aa2.96□□□□□ -1.94
CDC9YDL164C PAU12P53343 120 aa2.95□□□□□ -1.94
CDC9YDL164C VMA9Q3E7B6 73 aa2.95□□□□□ -1.94
CDC9YDL164C RPL26AP05743 127 aaKnown RBP2.95□□□□□ -1.94
CDC9YDL164C RPL40AP0CH08 128 aaKnown RBP2.95□□□□□ -1.94
CDC9YDL164C RPL40BP0CH09 128 aaKnown RBP2.95□□□□□ -1.94
CDC9YDL164C TMA19P35691 167 aaKnown RBP2.95□□□□□ -1.94
CDC9YDL164C QCR10P37299 77 aa2.95□□□□□ -1.94
CDC9YDL164C YBR013CP38215 129 aa2.95□□□□□ -1.94
CDC9YDL164C SWM2P40342 146 aa2.95□□□□□ -1.94
CDC9YDL164C RPL26BP53221 127 aaKnown RBP2.95□□□□□ -1.94
CDC9YDL164C KRE1P17260 313 aa2.94□□□□□ -1.94
CDC9YDL164C HPA3P39979 161 aa2.94□□□□□ -1.94
CDC9YDL164C POP3P53833 195 aaPredicted RBP2.94□□□□□ -1.94
CDC9YDL164C ELP6Q04868 273 aa2.94□□□□□ -1.94
CDC9YDL164C FLO1P32768 1537 aa2.94□□□□□ -1.94
CDC9YDL164C ATG8P38182 117 aaRIP-Chip data2.94□□□□□ -1.94not detected
CDC9YDL164C PIR1Q03178 341 aa2.94□□□□□ -1.94
CDC9YDL164C GPI19Q04082 140 aa2.94□□□□□ -1.94
CDC9YDL164C SEN15Q04675 128 aa2.94□□□□□ -1.94
CDC9YDL164C YOL131WQ08270 108 aa2.94□□□□□ -1.94
CDC9YDL164C YPR145C-AQ2V2P0 78 aa2.94□□□□□ -1.94
CDC9YDL164C YKL018C-AQ3E7A7 99 aa2.94□□□□□ -1.94
CDC9YDL164C MIC10Q96VH5 97 aa2.94□□□□□ -1.94
CDC9YDL164C FPR1P20081 114 aaKnown RBP2.93□□□□□ -1.94
CDC9YDL164C CLB6P32943 380 aa2.93□□□□□ -1.94
CDC9YDL164C DAD4P69851 72 aa2.93□□□□□ -1.94
CDC9YDL164C HRT1Q08273 121 aa2.93□□□□□ -1.94
CDC9YDL164C RAD28Q12021 506 aa2.93□□□□□ -1.94
CDC9YDL164C FIG2P25653 1609 aa2.93□□□□□ -1.94
CDC9YDL164C ECM29P38737 1868 aa2.93□□□□□ -1.94
CDC9YDL164C FIT2Q08906 153 aa2.93□□□□□ -1.94
CDC9YDL164C VPS68Q12016 184 aa2.93□□□□□ -1.94
CDC9YDL164C COX8P04039 78 aa2.92□□□□□ -1.94
CDC9YDL164C SEC11P15367 167 aa2.92□□□□□ -1.94
CDC9YDL164C FUN14P18411 198 aa2.92□□□□□ -1.94
CDC9YDL164C YCR099CP25657 155 aa2.92□□□□□ -1.94
CDC9YDL164C TDA2P40045 126 aa2.92□□□□□ -1.94
CDC9YDL164C DAN1P47178 298 aa2.92□□□□□ -1.94
CDC9YDL164C CUE4Q04201 117 aaPredicted RBP2.92□□□□□ -1.94
CDC9YDL164C KEI1Q06346 221 aa2.92□□□□□ -1.94
CDC9YDL164C BNI1P41832 1953 aa2.92□□□□□ -1.94
CDC9YDL164C PAU2P32612 120 aa2.91□□□□□ -1.94
CDC9YDL164C YIL059CP40520 121 aa2.91□□□□□ -1.94
CDC9YDL164C SPG1P50088 95 aa2.91□□□□□ -1.94
CDC9YDL164C SWC7Q06707 132 aa2.91□□□□□ -1.94
CDC9YDL164C RRT15Q3E811 62 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms