RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W YFR035CP43608 114 aa1.28□□□□□ -2.2
DPB3YBR278W YOR097CQ12274 175 aaPredicted RBP1.28□□□□□ -2.2
DPB3YBR278W MED11Q99278 115 aa1.28□□□□□ -2.2
DPB3YBR278W YJL197C-AP0C5P0 93 aa1.27□□□□□ -2.21
DPB3YBR278W MVB12P42939 101 aa1.27□□□□□ -2.21
DPB3YBR278W MIC27P50945 234 aa1.27□□□□□ -2.21
DPB3YBR278W YLR042CQ07990 161 aa1.27□□□□□ -2.21
DPB3YBR278W COA6Q3E846 104 aa1.27□□□□□ -2.21
DPB3YBR278W GSC2P40989 1895 aa1.26□□□□□ -2.21
DPB3YBR278W YHR130CP38834 111 aa1.26□□□□□ -2.21
DPB3YBR278W YIL163CP40448 117 aa1.26□□□□□ -2.21
DPB3YBR278W RPL37BP51402 88 aaKnown RBP1.26□□□□□ -2.21
DPB3YBR278W YIL014C-AQ02598 104 aa1.26□□□□□ -2.21
DPB3YBR278W FIT3Q08907 204 aa1.26□□□□□ -2.21
DPB3YBR278W YCR099CP25657 155 aa1.25□□□□□ -2.21
DPB3YBR278W PAU12P53343 120 aa1.25□□□□□ -2.21
DPB3YBR278W YPL261CQ08976 102 aa1.25□□□□□ -2.21
DPB3YBR278W CDC39P25655 2108 aaKnown RBP1.25□□□□□ -2.21
DPB3YBR278W SPP41P38904 1435 aa1.24□□□□□ -2.21
DPB3YBR278W YOR304C-AO14468 76 aa1.24□□□□□ -2.21
DPB3YBR278W EMP24P32803 203 aaKnown RBP1.24□□□□□ -2.21
DPB3YBR278W YMR141CP40211 102 aa1.24□□□□□ -2.21
DPB3YBR278W RUB1Q03919 77 aa1.24□□□□□ -2.21
DPB3YBR278W RTR2Q12378 196 aa1.24□□□□□ -2.21
DPB3YBR278W HUG1Q6Q5K6 68 aa1.24□□□□□ -2.21
DPB3YBR278W OST5Q92316 86 aa1.24□□□□□ -2.21
DPB3YBR278W TY1B-DR4Q07793 1604 aa1.23□□□□□ -2.21
DPB3YBR278W YER187WP40102 141 aa1.23□□□□□ -2.21
DPB3YBR278W PAM16P42949 149 aa1.23□□□□□ -2.21
DPB3YBR278W REV3P14284 1504 aa1.23□□□□□ -2.21
DPB3YBR278W RPL22AP05749 121 aaKnown RBP1.22□□□□□ -2.21
DPB3YBR278W YER188C-AP0C0V2 99 aa1.22□□□□□ -2.21
DPB3YBR278W ARL3Q02804 198 aa1.22□□□□□ -2.21
DPB3YBR278W PCC1Q3E833 88 aa1.22□□□□□ -2.21
DPB3YBR278W ENV10Q99382 181 aa1.22□□□□□ -2.21
DPB3YBR278W TCB3Q03640 1545 aaKnown RBP1.21□□□□□ -2.22
DPB3YBR278W SRX1P36077 127 aa1.21□□□□□ -2.22
DPB3YBR278W YER039C-AP0CD97 72 aa1.2□□□□□ -2.22
DPB3YBR278W MRPL31P14063 131 aaPredicted RBP1.2□□□□□ -2.22
DPB3YBR278W DAD1Q12248 94 aa1.2□□□□□ -2.22
DPB3YBR278W DNF1P32660 1571 aa1.2□□□□□ -2.22
DPB3YBR278W IRC20Q06554 1556 aa1.2□□□□□ -2.22
DPB3YBR278W MDS3P53094 1487 aa1.19□□□□□ -2.22
DPB3YBR278W LHP1P33399 275 aaKnown RBP1.19□□□□□ -2.22
DPB3YBR278W COX23P38824 151 aa1.19□□□□□ -2.22
DPB3YBR278W CYB5P40312 120 aa1.19□□□□□ -2.22
DPB3YBR278W POR2P40478 281 aa1.19□□□□□ -2.22
DPB3YBR278W THO2P53552 1597 aaKnown RBP1.19□□□□□ -2.22
DPB3YBR278W RPL22BP56628 122 aaKnown RBP1.19□□□□□ -2.22
DPB3YBR278W YGR240C-AQ3E786 66 aa1.19□□□□□ -2.22
DPB3YBR278W YLR365WQ7LIF2 110 aa1.19□□□□□ -2.22
DPB3YBR278W HFA1P32874 2273 aa1.19□□□□□ -2.22
DPB3YBR278W TY4B-JP47024 1803 aa1.19□□□□□ -2.22
DPB3YBR278W PEP1P32319 1579 aa1.18□□□□□ -2.22
DPB3YBR278W LTE1P07866 1435 aa1.18□□□□□ -2.22
DPB3YBR278W ICS3P47034 131 aa1.18□□□□□ -2.22
DPB3YBR278W SNN1P48232 102 aa1.18□□□□□ -2.22
DPB3YBR278W YGL041C-BQ3E750 60 aa1.18□□□□□ -2.22
DPB3YBR278W YLR285C-AQ3E771 56 aa1.18□□□□□ -2.22
DPB3YBR278W BNI1P41832 1953 aa1.17□□□□□ -2.22
DPB3YBR278W RPL43AP0CX25 92 aaKnown RBP1.17□□□□□ -2.22
DPB3YBR278W RPL43BP0CX26 92 aa1.17□□□□□ -2.22
DPB3YBR278W PAU2P32612 120 aa1.17□□□□□ -2.22
DPB3YBR278W PAU24P38155 120 aa1.17□□□□□ -2.22
DPB3YBR278W YPK9Q12697 1472 aa1.17□□□□□ -2.22
DPB3YBR278W BPT1P14772 1559 aa1.17□□□□□ -2.22
DPB3YBR278W BUD4P47136 1447 aa1.16□□□□□ -2.22
DPB3YBR278W YER137CP40083 148 aaKnown RBP1.16□□□□□ -2.22
DPB3YBR278W YIR020CP40575 100 aa1.16□□□□□ -2.22
DPB3YBR278W GTT1P40582 234 aa1.16□□□□□ -2.22
DPB3YBR278W YMR321CQ04898 105 aa1.16□□□□□ -2.22
DPB3YBR278W OCA6Q12454 224 aa1.16□□□□□ -2.22
DPB3YBR278W RPA190P10964 1664 aaKnown RBP1.16□□□□□ -2.22
DPB3YBR278W ESC1Q03661 1658 aaKnown RBP1.16□□□□□ -2.22
DPB3YBR278W TY1B-HO13535 1793 aa1.16□□□□□ -2.22
DPB3YBR278W HIR3P47171 1648 aa1.15□□□□□ -2.22
DPB3YBR278W YLR363W-AQ3E747 85 aa1.15□□□□□ -2.23
DPB3YBR278W YRF1-3P0CX14 1859 aa1.15□□□□□ -2.23
DPB3YBR278W YRF1-7P0CX15 1859 aa1.15□□□□□ -2.23
DPB3YBR278W YOR093CQ12275 1648 aa1.15□□□□□ -2.23
DPB3YBR278W YCF1P39109 1515 aaKnown RBP1.15□□□□□ -2.23
DPB3YBR278W CDC25P04821 1589 aa1.14□□□□□ -2.23
DPB3YBR278W GEA2P39993 1459 aaKnown RBP1.14□□□□□ -2.23
DPB3YBR278W HMRA2P0CY13 119 aa1.14□□□□□ -2.23
DPB3YBR278W YEA6P39953 335 aa1.14□□□□□ -2.23
DPB3YBR278W YOR034C-AQ3E735 80 aa1.14□□□□□ -2.23
DPB3YBR278W SSK2P53599 1579 aa1.13□□□□□ -2.23
DPB3YBR278W PAU19P0CE85 124 aa1.13□□□□□ -2.23
DPB3YBR278W PAU3P25610 124 aa1.13□□□□□ -2.23
DPB3YBR278W VPS55P47111 140 aa1.13□□□□□ -2.23
DPB3YBR278W RPO31P04051 1460 aa1.12□□□□□ -2.23
DPB3YBR278W DNF2Q12675 1612 aa1.12□□□□□ -2.23
DPB3YBR278W HUR1P45820 110 aa1.12□□□□□ -2.23
DPB3YBR278W MMS1Q06211 1407 aa1.12□□□□□ -2.23
DPB3YBR278W SPT6P23615 1451 aaKnown RBP1.12□□□□□ -2.23
DPB3YBR278W BUD23P25627 275 aaPredicted RBP1.11□□□□□ -2.23
DPB3YBR278W VMA21P41806 77 aa1.11□□□□□ -2.23
DPB3YBR278W GNA1P43577 159 aaPredicted RBP1.11□□□□□ -2.23
DPB3YBR278W YJR128WP47162 119 aa1.11□□□□□ -2.23
DPB3YBR278W RPS12P48589 143 aaKnown RBP1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms