RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 KRT76Q01546 638 aa12.06□□□□□ -0.48
DDB1-224ENST00000545894 RNASELQ05823 741 aaKnown RBP12.06□□□□□ -0.48
DDB1-224ENST00000545894 ZACNQ401N2 412 aa12.06□□□□□ -0.48
DDB1-224ENST00000545894 TAF1BQ53T94 588 aaPredicted RBP12.06□□□□□ -0.48
DDB1-224ENST00000545894 CMPK2Q5EBM0 449 aa12.06□□□□□ -0.48
DDB1-224ENST00000545894 PPP1R2P3Q6NXS1 205 aa12.06□□□□□ -0.48
DDB1-224ENST00000545894 LVRNQ6Q4G3 990 aa12.06□□□□□ -0.48
DDB1-224ENST00000545894 MAMDC4Q6UXC1 1216 aa12.06□□□□□ -0.48
DDB1-224ENST00000545894 NLRP9Q7RTR0 991 aa12.06□□□□□ -0.48
DDB1-224ENST00000545894 ARMC2Q8NEN0 867 aa12.06□□□□□ -0.48
DDB1-224ENST00000545894 ZNF398Q8TD17 642 aa12.06□□□□□ -0.48
DDB1-224ENST00000545894 ZNF75CPQ92670 426 aaPredicted RBP12.06□□□□□ -0.48
DDB1-224ENST00000545894 BICD1Q96G01 975 aa12.06□□□□□ -0.48
DDB1-224ENST00000545894 SENP7Q9BQF6 1050 aa12.06□□□□□ -0.48
DDB1-224ENST00000545894 OSBPL1AQ9BXW6 950 aa12.06□□□□□ -0.48
DDB1-224ENST00000545894 PARVAQ9NVD7 372 aa12.06□□□□□ -0.48
DDB1-224ENST00000545894 ZFP69BQ9UJL9 534 aa12.06□□□□□ -0.48
DDB1-224ENST00000545894 ZMYND8Q9ULU4 1186 aaPredicted RBP12.06□□□□□ -0.48
DDB1-224ENST00000545894 SHOC2Q9UQ13 582 aa12.06□□□□□ -0.48
DDB1-224ENST00000545894 PCDHB4Q9Y5E5 795 aa12.06□□□□□ -0.48
DDB1-224ENST00000545894 ASB14A6NK59 587 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 ATP9AO75110 1047 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 SNAI1O95863 264 aaPredicted RBP12.05□□□□□ -0.48
DDB1-224ENST00000545894 KRT1P04264 644 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 PTPN4P29074 926 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 CCND2P30279 289 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 GNA15P30679 374 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 MCL1Q07820 350 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 PDIA2Q13087 525 aaKnown RBP12.05□□□□□ -0.48
DDB1-224ENST00000545894 IRF5Q13568 498 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 ATP13A4Q4VNC1 1196 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 RNASEH2BQ5TBB1 312 aaKnown RBP12.05□□□□□ -0.48
DDB1-224ENST00000545894 OLFML2BQ68BL8 750 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 LMBRD2Q68DH5 695 aaPredicted RBP12.05□□□□□ -0.48
DDB1-224ENST00000545894 TRIM68Q6AZZ1 485 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 MFSD7Q6UXD7 560 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 ARMCX2Q7L311 632 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.05□□□□□ -0.482e-7■■■■■ 102.3
DDB1-224ENST00000545894 ASAP3Q8TDY4 903 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 MRRFQ96E11 262 aaKnown RBP12.05□□□□□ -0.48
DDB1-224ENST00000545894 FNBP1Q96RU3 617 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 TINF2Q9BSI4 451 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 MAK16Q9BXY0 300 aaKnown RBP12.05□□□□□ -0.48
DDB1-224ENST00000545894 TLE6Q9H808 572 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 SAR1AQ9NR31 198 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 ZFATQ9P243 1243 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 LNPEPQ9UIQ6 1025 aa12.05□□□□□ -0.48
DDB1-224ENST00000545894 EXTL3O43909 919 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 C4BPAP04003 597 aaKnown RBP12.04□□□□□ -0.48
DDB1-224ENST00000545894 TROVE2P10155 538 aaKnown RBP eCLIP12.04□□□□□ -0.48
DDB1-224ENST00000545894 KRT4P19013 534 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 TNNI1P19237 187 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 ATP6V1C1P21283 382 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 SOX10P56693 466 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 GEMIN4P57678 1058 aaKnown RBP12.04□□□□□ -0.48
DDB1-224ENST00000545894 CUL2Q13617 745 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 PSMD6Q15008 389 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 EFHC2Q5JST6 749 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 TDRD10Q5VZ19 366 aaKnown RBP12.04□□□□□ -0.48
DDB1-224ENST00000545894 NAIF1Q69YI7 327 aaPredicted RBP12.04□□□□□ -0.48
DDB1-224ENST00000545894 SPOPLQ6IQ16 392 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 TMEM270Q6UE05 265 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 EP400NLQ6ZTU2 488 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 LMNTD2Q8IXW0 634 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 RAET1EQ8TD07 263 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 TRIB2Q92519 343 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 CEP170P1Q96L14 293 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 NPHS2Q9NP85 383 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 ADCY3O60266 1144 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 LMNAP02545 664 aaKnown RBP12.04□□□□□ -0.48
DDB1-224ENST00000545894 FGFR1P11362 822 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 ELNP15502 786 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 MARK3P27448 753 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 SSTR3P32745 418 aaPredicted RBP12.04□□□□□ -0.48
DDB1-224ENST00000545894 PCK1P35558 622 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 VCPP55072 806 aaKnown RBP12.04□□□□□ -0.48
DDB1-224ENST00000545894 TRIM32Q13049 653 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 STXBP2Q15833 593 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 PRAMEF19Q5SWL8 479 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 LRRC38Q5VT99 294 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 XRRA1Q6P2D8 792 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 SPOCD1Q6ZMY3 1216 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 EEPD1Q7L9B9 569 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 CLNKQ7Z7G1 428 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 NLRX1Q86UT6 975 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 TTC8Q8TAM2 541 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 NKD2Q969F2 451 aaPredicted RBP12.04□□□□□ -0.48
DDB1-224ENST00000545894 DENND2DQ9H6A0 471 aaPredicted RBP12.04□□□□□ -0.48
DDB1-224ENST00000545894 PCDH9Q9HC56 1237 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.04□□□□□ -0.48
DDB1-224ENST00000545894 ANKFY1Q9P2R3 1169 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 FETUBQ9UGM5 382 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 PTCH2Q9Y6C5 1203 aa12.04□□□□□ -0.48
DDB1-224ENST00000545894 TMEM191CA6NGB0 347 aa12.03□□□□□ -0.48
DDB1-224ENST00000545894 RGS20O76081 388 aa12.03□□□□□ -0.48
DDB1-224ENST00000545894 ITGAVP06756 1048 aa12.03□□□□□ -0.48
DDB1-224ENST00000545894 TMEM191BP0C7N4 346 aa12.03□□□□□ -0.48
DDB1-224ENST00000545894 TCF4P15884 667 aa12.03□□□□□ -0.48
DDB1-224ENST00000545894 PHBP35232 272 aa12.03□□□□□ -0.48
DDB1-224ENST00000545894 PTDSS1P48651 473 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms