RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 BIN1O00499 593 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 NRP1O14786 923 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 PIP5K1CO60331 668 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 TMEM127O75204 238 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 SKAP2O75563 359 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 COL6A1P12109 1028 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 GYPEP15421 78 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 ABCB4P21439 1286 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 GLRBP48167 497 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 MAPK10P53779 464 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 MXRA7P84157 204 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 ZNF200P98182 395 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 CD69Q07108 199 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 DMWDQ09019 674 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 SNAPC2Q13487 334 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 HLFQ16534 295 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 ZNF792Q3KQV3 632 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 MMS22LQ6ZRQ5 1243 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 B3GNT8Q7Z7M8 397 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 SDR16C5Q8N3Y7 309 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 CCDC33Q8N5R6 958 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 ZNF527Q8NB42 609 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 TMX3Q96JJ7 454 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 SOX7Q9BT81 388 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 PAGR1Q9BTK6 254 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 ATP6V0A4Q9HBG4 840 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 MOCS1Q9NZB8 636 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 FNIP2Q9P278 1114 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 PCDHA3Q9Y5H8 950 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 AK9Q5TCS8 1911 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 PSME4Q14997 1843 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 A0A087WV62 115 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 GRXCR1A8MXD5 290 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 APOL1O14791 398 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 FYB1O15117 783 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 FFAR2O15552 330 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 MTSS1O43312 755 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 C8BP07358 591 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 GAAP10253 952 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 MALP21145 153 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 ADSLP30566 484 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 MAN1A1P33908 653 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 CHKAP35790 457 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 MEOX1P50221 254 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 FMO1Q01740 532 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 TLE1Q04724 770 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 PPFIA1Q13136 1202 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 CNGB1Q14028 1251 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 EIF4A2Q14240 407 aaKnown RBP5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 HABP2Q14520 560 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 PUM1Q14671 1186 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 SEPT2Q15019 361 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 EIF4HQ15056 248 aaKnown RBP5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 CCDC38Q502W7 563 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 KHDC1LQ5JSQ8 128 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 EMC10Q5UCC4 262 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 SPTY2D1Q68D10 685 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 GPR155Q7Z3F1 870 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 ATG4DQ86TL0 474 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 PQLC1Q8N2U9 271 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 NGEFQ8N5V2 710 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 STPG3Q8N7X2 389 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 FANCBQ8NB91 859 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 KYQ8NBH2 561 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 OR2I1PQ8NGU4 316 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 OR6B3Q8NGW1 331 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 PLBD2Q8NHP8 589 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 NMD3Q96D46 503 aaKnown RBP5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 PARK7Q99497 189 aaKnown RBP5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 VEZTQ9HBM0 779 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 TLR9Q9NR96 1032 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 SIRT5Q9NXA8 310 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 POLLQ9UGP5 575 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 DNAI1Q9UI46 699 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 ADAMTS6Q9UKP5 1117 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 ZDHHC8Q9ULC8 765 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 TRIOO75962 3097 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 CHD9Q3L8U1 2897 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 MYO18BQ8IUG5 2567 aa5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 MYBBP1AQ9BQG0 1328 aaKnown RBP5.47□□□□□ -1.53
HMGB1P23-201ENST00000518743 TECTAO75443 2155 aa5.46□□□□□ -1.53
HMGB1P23-201ENST00000518743 NUP98P52948 1817 aa5.46□□□□□ -1.53
HMGB1P23-201ENST00000518743 GOLGA6L3A6NEY3 463 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 RNMTO43148 476 aaKnown RBP5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 THAP12O43422 761 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 GPR32O75388 356 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 IL18BPO95998 194 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 GLI1P08151 1106 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 GNAI3P08754 354 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 TSHRP16473 764 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 DDCP20711 480 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 CASP2P42575 452 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 ITGA1P56199 1179 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 CTXN1P60606 82 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 GNAI1P63096 354 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 FPGSQ05932 587 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 GRAPQ13588 217 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 VGLL4Q14135 290 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 UBE3CQ15386 1083 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 PUM3Q15397 648 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms