RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 MIIPQ5JXC2 388 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 SDHAF4Q5VUM1 108 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 PHLDB3Q6NSJ2 640 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 MUC3BQ9H195 1237 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 DPH5Q9H2P9 285 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 PRDM10Q9NQV6 1147 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 CACNG4Q9UBN1 327 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 NRP1O14786 923 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 ASS1P00966 412 aaKnown RBP9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 FGGP02679 453 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 USP17L7P0C7H9 530 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 KRT10P13645 584 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 FIGNQ5HY92 759 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 KCNT2Q6UVM3 1135 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 KLHDC9Q8NEP7 349 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 GPR152Q8TDT2 470 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 KRT12Q99456 494 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 AP1M1Q9BXS5 423 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 ZMYND15Q9H091 742 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 ASAH2Q9NR71 780 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 STK39Q9UEW8 545 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 DLEC1Q9Y238 1755 aa9.93□□□□□ -0.82
GAPVD1-219ENST00000495955 EEF2KO00418 725 aaKnown RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 NCK2O43639 380 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 C4BPAP04003 597 aaKnown RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 SLC2A3P11169 496 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 MFSD5Q6N075 450 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 SCUBE3Q8IX30 993 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 RNF10Q8N5U6 811 aaKnown RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 PDCD6IPQ8WUM4 868 aaKnown RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 WNT8AQ9H1J5 351 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 FARP1Q9Y4F1 1045 aaPredicted RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 SQORQ9Y6N5 450 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 PI4K2BG5E9Z4 385 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 CLDN5O00501 218 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 PIGRP01833 764 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 TMEM253P0C7T8 217 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 RBM10P98175 930 aaKnown RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 AP1B1Q10567 949 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 DDR2Q16832 855 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 CLEC16AQ2KHT3 1053 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 SMTNL2Q2TAL5 461 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 LRRC15Q8TF66 581 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 DNAJC7Q99615 494 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 RGS18Q9NS28 235 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 A0A087X0T9 212 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 FAM228BP0C875 321 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 TKTP29401 623 aaKnown RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 MAN1A1P33908 653 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 ST8SIA6P61647 398 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 TRIP13Q15645 432 aaPredicted RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 LRRC26Q2I0M4 334 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 ANO4Q32M45 955 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 ZNF571Q7Z3V5 609 aaPredicted RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 C12orf29Q8N999 325 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 SEMA4DQ92854 862 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 IQCGQ9H095 443 aaKnown RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 KLHL8Q9P2G9 620 aaPredicted RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 FNDC3AQ9Y2H6 1198 aaKnown RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 ARL1P40616 181 aaPredicted RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 LILRA4P59901 499 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 BASP1P80723 227 aaKnown RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 DUSP4Q13115 394 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 NR1H3Q13133 447 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 PRSS55Q6UWB4 352 aaPredicted RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 DENND5BQ6ZUT9 1274 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 DNAAF3Q8N9W5 541 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 ABHD8Q96I13 439 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 CDK5RAP1Q96SZ6 601 aaKnown RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 ACP6Q9NPH0 428 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 OGDHLQ9ULD0 1010 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 COL6A1P12109 1028 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 NPR3P17342 541 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 RPL17P18621 184 aaKnown RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 IL31Q6EBC2 164 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 EFCAB13Q8IY85 973 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 PDCL2Q8N4E4 241 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 B3GALT6Q96L58 329 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 SLC9A7Q96T83 725 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 ERVK-5Q9HDB9 667 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 WDR70Q9NW82 654 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 SAMD15Q9P1V8 674 aa9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 MRPS23Q9Y3D9 190 aaKnown RBP9.92□□□□□ -0.82
GAPVD1-219ENST00000495955 F8VP50 259 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 H0Y626 953 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 APOL1O14791 398 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 BAIAP3O94812 1187 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 FOXR2Q6PJQ5 311 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 RAD9BQ6WBX8 426 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 EMC1Q8N766 993 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 TMEM40Q8WWA1 233 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 ZBTB9Q96C00 473 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 MAD1L1Q9Y6D9 718 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 IGKV6-21A0A0C4DH24 114 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 TLDC2A0PJX2 215 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 TTLL13PA6NNM8 815 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 SYN3O14994 580 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 ECEL1O95672 775 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms