RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 DPP1Q05521 289 aa1.69□□□□□ -2.14
snR43snR43 CTR3Q06686 241 aa1.69□□□□□ -2.14
snR43snR43 RRT7Q07829 113 aa1.69□□□□□ -2.14
snR43snR43 YLR146W-AQ2V2P1 62 aa1.69□□□□□ -2.14
snR43snR43 HTB2P02294 131 aa1.68□□□□□ -2.14
snR43snR43 GCN3P14741 305 aa1.68□□□□□ -2.14
snR43snR43 QCR9P22289 66 aa1.68□□□□□ -2.14
snR43snR43 HSP12P22943 109 aaKnown RBP1.68□□□□□ -2.14
snR43snR43 RPL16BP26785 198 aaKnown RBP1.68□□□□□ -2.14
snR43snR43 AHT1P29589 182 aa1.68□□□□□ -2.14
snR43snR43 ACP1P32463 125 aa1.68□□□□□ -2.14
snR43snR43 UTP11P34247 250 aaPredicted RBP1.68□□□□□ -2.14
snR43snR43 KTI12P34253 313 aaKnown RBP1.68□□□□□ -2.14
snR43snR43 MRPL28P36527 147 aa1.68□□□□□ -2.14
snR43snR43 DER1P38307 211 aa1.68□□□□□ -2.14
snR43snR43 YEA4P40004 342 aa1.68□□□□□ -2.14
snR43snR43 EMC5P40540 141 aa1.68□□□□□ -2.14
snR43snR43 KEG1P43614 200 aa1.68□□□□□ -2.14
snR43snR43 AIM34Q03673 198 aa1.68□□□□□ -2.14
snR43snR43 YMR007WQ03675 126 aa1.68□□□□□ -2.14
snR43snR43 AVO2Q04749 426 aa1.68□□□□□ -2.14
snR43snR43 YBR200W-AQ3E755 54 aa1.68□□□□□ -2.14
snR43snR43 YBR298C-AQ8TGK4 73 aa1.68□□□□□ -2.14
snR43snR43 YPR010C-AA5Z2X5 72 aa1.67□□□□□ -2.14
snR43snR43 YCR023CP25351 611 aa1.67□□□□□ -2.14
snR43snR43 TIP1P27654 210 aaPredicted RBP1.67□□□□□ -2.14
snR43snR43 YBR013CP38215 129 aa1.67□□□□□ -2.14
snR43snR43 AME1P38313 324 aa1.67□□□□□ -2.14
snR43snR43 YBR242WP38331 238 aa1.67□□□□□ -2.14
snR43snR43 YKE4P40544 346 aa1.67□□□□□ -2.14
snR43snR43 COX16P47081 118 aa1.67□□□□□ -2.14
snR43snR43 PNC1P53184 216 aaKnown RBP1.67□□□□□ -2.14
snR43snR43 MRPL50P53724 139 aa1.67□□□□□ -2.14
snR43snR43 ERI1P62651 68 aaKnown RBP1.67□□□□□ -2.14
snR43snR43 LCL1Q02786 101 aa1.67□□□□□ -2.14
snR43snR43 BET5Q03630 159 aa1.67□□□□□ -2.14
snR43snR43 ATC1Q04005 294 aa1.67□□□□□ -2.14
snR43snR43 BER1Q06688 274 aaKnown RBP1.67□□□□□ -2.14
snR43snR43 UTP23Q12339 254 aaKnown RBP1.67□□□□□ -2.14
snR43snR43 YLR342W-AQ3E810 57 aa1.67□□□□□ -2.14
snR43snR43 RRT15Q3E811 62 aa1.67□□□□□ -2.14
snR43snR43 RPL31BP0C2H9 113 aaKnown RBP1.66□□□□□ -2.14
snR43snR43 UBC5P15732 148 aa1.66□□□□□ -2.14
snR43snR43 CDC50P25656 391 aa1.66□□□□□ -2.14
snR43snR43 YHR173CP38864 112 aa1.66□□□□□ -2.14
snR43snR43 YMR141CP40211 102 aa1.66□□□□□ -2.14
snR43snR43 RIB4P50861 169 aaPredicted RBP1.66□□□□□ -2.14
snR43snR43 MGA1P53050 456 aa1.66□□□□□ -2.14
snR43snR43 YGR017WP53210 297 aa1.66□□□□□ -2.14
snR43snR43 SDO1Q07953 250 aaKnown RBP1.66□□□□□ -2.14
snR43snR43 PPT2Q12036 173 aa1.66□□□□□ -2.14
snR43snR43 YLR307C-AQ3E825 87 aa1.66□□□□□ -2.14
snR43snR43 CPR1P14832 162 aaKnown RBP1.65□□□□□ -2.15
snR43snR43 YCR007CP25354 239 aa1.65□□□□□ -2.15
snR43snR43 TRS20P38334 175 aa1.65□□□□□ -2.15
snR43snR43 SVP26P38869 228 aa1.65□□□□□ -2.15
snR43snR43 YIL059CP40520 121 aa1.65□□□□□ -2.15
snR43snR43 YGL185CP53100 379 aa1.65□□□□□ -2.15
snR43snR43 TIM21P53220 239 aa1.65□□□□□ -2.15
snR43snR43 YNR066CP53752 436 aa1.65□□□□□ -2.15
snR43snR43 CAF40P53829 373 aa1.65□□□□□ -2.15
snR43snR43 DID2P69771 204 aa1.65□□□□□ -2.15
snR43snR43 FCF1Q05498 189 aaPredicted RBP1.65□□□□□ -2.15
snR43snR43 DGA1Q08650 418 aa1.65□□□□□ -2.15
snR43snR43 YMR122W-AQ3E842 84 aa1.65□□□□□ -2.15
snR43snR43 YAR023CD6VPM8 179 aa1.64□□□□□ -2.15
snR43snR43 RPL12AP0CX53 165 aaKnown RBP1.64□□□□□ -2.15
snR43snR43 RPL12BP0CX54 165 aa1.64□□□□□ -2.15
snR43snR43 CKS1P20486 150 aaKnown RBP1.64□□□□□ -2.15
snR43snR43 SPO13P23624 291 aa1.64□□□□□ -2.15
snR43snR43 DAD4P69851 72 aa1.64□□□□□ -2.15
snR43snR43 RAV2Q03956 351 aa1.64□□□□□ -2.15
snR43snR43 YMR320WQ04897 101 aa1.64□□□□□ -2.15
snR43snR43 YLR194CQ05777 254 aa1.64□□□□□ -2.15
snR43snR43 YCL021W-AQ96VH3 125 aa1.64□□□□□ -2.15
snR43snR43 TAL1P15019 335 aaKnown RBP1.63□□□□□ -2.15
snR43snR43 SEC59P20048 519 aa1.63□□□□□ -2.15
snR43snR43 RPL16AP26784 199 aaKnown RBP1.63□□□□□ -2.15
snR43snR43 HMX1P32339 317 aa1.63□□□□□ -2.15
snR43snR43 MRP49P32388 137 aa1.63□□□□□ -2.15
snR43snR43 TEM1P38987 245 aa1.63□□□□□ -2.15
snR43snR43 SUR2P38992 349 aa1.63□□□□□ -2.15
snR43snR43 ERG28P40030 148 aa1.63□□□□□ -2.15
snR43snR43 HUA1P40325 198 aa1.63□□□□□ -2.15
snR43snR43 LOC1P43586 204 aaPredicted RBP1.63□□□□□ -2.15
snR43snR43 YJR111CP47148 283 aaKnown RBP1.63□□□□□ -2.15
snR43snR43 YGR149WP48236 432 aa1.63□□□□□ -2.15
snR43snR43 MMS2P53152 137 aa1.63□□□□□ -2.15
snR43snR43 PMP3P87284 55 aa1.63□□□□□ -2.15
snR43snR43 MRPS17Q03246 237 aaPredicted RBP1.63□□□□□ -2.15
snR43snR43 UPS3Q04006 179 aa1.63□□□□□ -2.15
snR43snR43 YDR029WQ12111 104 aa1.63□□□□□ -2.15
snR43snR43 DAD1Q12248 94 aa1.63□□□□□ -2.15
snR43snR43 TIM22Q12328 207 aa1.63□□□□□ -2.15
snR43snR43 YDR010CQ12426 110 aa1.63□□□□□ -2.15
snR43snR43 ACB1P31787 87 aa1.62□□□□□ -2.15
snR43snR43 RPS0AP32905 252 aaKnown RBP1.62□□□□□ -2.15
snR43snR43 RPL14AP36105 138 aaKnown RBP1.62□□□□□ -2.15
snR43snR43 MIX23P38162 196 aa1.62□□□□□ -2.15
snR43snR43 YBR292CP38357 123 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 115.3 ms