RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W YLR146W-AQ2V2P1 62 aa3.36□□□□□ -1.87
SSO1YPL232W YIL059CP40520 121 aa3.35□□□□□ -1.87
SSO1YPL232W ATC1Q04005 294 aa3.35□□□□□ -1.87
SSO1YPL232W AVO2Q04749 426 aa3.35□□□□□ -1.87
SSO1YPL232W DDR48P18899 430 aaKnown RBP3.34□□□□□ -1.87
SSO1YPL232W AHT1P29589 182 aa3.34□□□□□ -1.87
SSO1YPL232W MRPL50P53724 139 aa3.34□□□□□ -1.87
SSO1YPL232W CAF40P53829 373 aa3.34□□□□□ -1.87
SSO1YPL232W YMR320WQ04897 101 aa3.34□□□□□ -1.87
SSO1YPL232W YMR122W-AQ3E842 84 aa3.34□□□□□ -1.87
SSO1YPL232W CDC50P25656 391 aa3.33□□□□□ -1.88
SSO1YPL232W TRS20P38334 175 aa3.33□□□□□ -1.88
SSO1YPL232W COX16P47081 118 aa3.33□□□□□ -1.88
SSO1YPL232W RAV2Q03956 351 aa3.33□□□□□ -1.88
SSO1YPL232W BER1Q06688 274 aaKnown RBP3.33□□□□□ -1.88
SSO1YPL232W YLR342W-AQ3E810 57 aa3.33□□□□□ -1.88
SSO1YPL232W RPL31BP0C2H9 113 aaKnown RBP3.32□□□□□ -1.88
SSO1YPL232W SPO13P23624 291 aa3.32□□□□□ -1.88
SSO1YPL232W YEA4P40004 342 aa3.32□□□□□ -1.88
SSO1YPL232W HUA1P40325 198 aa3.32□□□□□ -1.88
SSO1YPL232W RIB4P50861 169 aaPredicted RBP3.32□□□□□ -1.88
SSO1YPL232W PNC1P53184 216 aaKnown RBP3.32□□□□□ -1.88
SSO1YPL232W YDR029WQ12111 104 aa3.32□□□□□ -1.88
SSO1YPL232W RPN13O13563 156 aa3.31□□□□□ -1.88
SSO1YPL232W UBC5P15732 148 aa3.31□□□□□ -1.88
SSO1YPL232W RPL14AP36105 138 aaKnown RBP3.31□□□□□ -1.88
SSO1YPL232W AME1P38313 324 aa3.31□□□□□ -1.88
SSO1YPL232W YBR242WP38331 238 aa3.31□□□□□ -1.88
SSO1YPL232W RPL14BP38754 138 aaKnown RBP3.31□□□□□ -1.88
SSO1YPL232W YHR173CP38864 112 aa3.31□□□□□ -1.88
SSO1YPL232W YKE4P40544 346 aa3.31□□□□□ -1.88
SSO1YPL232W YGL185CP53100 379 aa3.31□□□□□ -1.88
SSO1YPL232W MRPS16Q02608 121 aa3.31□□□□□ -1.88
SSO1YPL232W UTP23Q12339 254 aaKnown RBP3.31□□□□□ -1.88
SSO1YPL232W SEC59P20048 519 aa3.3□□□□□ -1.88
SSO1YPL232W ACP1P32463 125 aa3.3□□□□□ -1.88
SSO1YPL232W DID2P69771 204 aa3.3□□□□□ -1.88
SSO1YPL232W UPS3Q04006 179 aa3.3□□□□□ -1.88
SSO1YPL232W RPL16AP26784 199 aaKnown RBP3.29□□□□□ -1.88
SSO1YPL232W TIM21P53220 239 aa3.29□□□□□ -1.88
SSO1YPL232W DAD4P69851 72 aa3.29□□□□□ -1.88
SSO1YPL232W YLR194CQ05777 254 aa3.29□□□□□ -1.88
SSO1YPL232W DAD1Q12248 94 aa3.29□□□□□ -1.88
SSO1YPL232W HMX1P32339 317 aa3.28□□□□□ -1.88
SSO1YPL232W SMP1P38128 452 aa3.28□□□□□ -1.88
SSO1YPL232W SUR2P38992 349 aa3.28□□□□□ -1.88
SSO1YPL232W POG1P40473 351 aa3.28□□□□□ -1.88
SSO1YPL232W PMP3P87284 55 aa3.28□□□□□ -1.88
SSO1YPL232W TIM22Q12328 207 aa3.28□□□□□ -1.88
SSO1YPL232W TIR1P10863 254 aa3.27□□□□□ -1.89
SSO1YPL232W UTP11P34247 250 aaPredicted RBP3.27□□□□□ -1.89
SSO1YPL232W ERG28P40030 148 aa3.27□□□□□ -1.89
SSO1YPL232W ARC15P40518 154 aaRIP-Chip data3.27□□□□□ -1.89not detected
SSO1YPL232W YJR111CP47148 283 aaKnown RBP3.27□□□□□ -1.89
SSO1YPL232W YBL112CQ3E7Y4 105 aa3.27□□□□□ -1.89
SSO1YPL232W RPL12AP0CX53 165 aaKnown RBP3.26□□□□□ -1.89
SSO1YPL232W RPL12BP0CX54 165 aa3.26□□□□□ -1.89
SSO1YPL232W HYP2P23301 157 aaKnown RBP3.26□□□□□ -1.89
SSO1YPL232W RPS0AP32905 252 aaKnown RBP3.26□□□□□ -1.89
SSO1YPL232W RPL32P38061 130 aaKnown RBP3.26□□□□□ -1.89
SSO1YPL232W YPT10P38146 199 aa3.26□□□□□ -1.89
SSO1YPL232W MIX23P38162 196 aa3.26□□□□□ -1.89
SSO1YPL232W TEM1P38987 245 aa3.26□□□□□ -1.89
SSO1YPL232W AIM19P40502 157 aa3.26□□□□□ -1.89
SSO1YPL232W YNR066CP53752 436 aa3.26□□□□□ -1.89
SSO1YPL232W DIA1P54005 336 aa3.26□□□□□ -1.89
SSO1YPL232W ATG33Q06485 197 aa3.26□□□□□ -1.89
SSO1YPL232W MHR1Q06630 226 aa3.26□□□□□ -1.89
SSO1YPL232W PCC1Q3E833 88 aa3.26□□□□□ -1.89
SSO1YPL232W MRP49P32388 137 aa3.25□□□□□ -1.89
SSO1YPL232W PGD1P40356 397 aa3.25□□□□□ -1.89
SSO1YPL232W SNA2P56508 79 aa3.25□□□□□ -1.89
SSO1YPL232W POF1P25576 258 aa3.24□□□□□ -1.89
SSO1YPL232W YBL081WP38180 368 aaKnown RBP3.24□□□□□ -1.89
SSO1YPL232W LOC1P43586 204 aaPredicted RBP3.24□□□□□ -1.89
SSO1YPL232W PHO23P50947 330 aa3.24□□□□□ -1.89
SSO1YPL232W YGR026WP53217 278 aa3.24□□□□□ -1.89
SSO1YPL232W MRPS17Q03246 237 aaPredicted RBP3.24□□□□□ -1.89
SSO1YPL232W CKS1P20486 150 aaKnown RBP3.23□□□□□ -1.89
SSO1YPL232W YGL117WP53133 265 aa3.23□□□□□ -1.89
SSO1YPL232W FCF2Q12035 217 aaPredicted RBP3.23□□□□□ -1.89
SSO1YPL232W YBR292CP38357 123 aa3.22□□□□□ -1.89
SSO1YPL232W YAL064WP39711 94 aa3.22□□□□□ -1.89
SSO1YPL232W CIN5P40917 295 aa3.22□□□□□ -1.89
SSO1YPL232W HAC1P41546 238 aa3.22□□□□□ -1.89
SSO1YPL232W ACB1P31787 87 aa3.21□□□□□ -1.9
SSO1YPL232W PEX22P39718 180 aa3.21□□□□□ -1.9
SSO1YPL232W RPC10P40422 70 aa3.21□□□□□ -1.9
SSO1YPL232W YFR045WP43617 309 aa3.21□□□□□ -1.9
SSO1YPL232W YOR015WQ12169 119 aa3.21□□□□□ -1.9
SSO1YPL232W FZF1P32805 299 aa3.2□□□□□ -1.9
SSO1YPL232W YIL163CP40448 117 aa3.2□□□□□ -1.9
SSO1YPL232W SMD3P43321 101 aaKnown RBP3.2□□□□□ -1.9
SSO1YPL232W ATP19P81451 68 aa3.2□□□□□ -1.9
SSO1YPL232W YCL001W-AP87012 153 aa3.2□□□□□ -1.9
SSO1YPL232W DXO1Q06349 442 aa3.2□□□□□ -1.9
SSO1YPL232W SNU23Q12368 194 aaPredicted RBP3.2□□□□□ -1.9
SSO1YPL232W RPP2AP05319 106 aaKnown RBP3.19□□□□□ -1.9
SSO1YPL232W YOR105WQ08504 108 aa3.19□□□□□ -1.9
SSO1YPL232W UBI4P0CG63 381 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms