RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C YBL112CQ3E7Y4 105 aa3.11□□□□□ -1.91
SNF8YPL002C KTI11Q3E840 82 aa3.11□□□□□ -1.91
SNF8YPL002C RAD6P06104 172 aa3.1□□□□□ -1.91
SNF8YPL002C CAP2P13517 287 aa3.1□□□□□ -1.91
SNF8YPL002C YCR007CP25354 239 aa3.1□□□□□ -1.91
SNF8YPL002C SHB17P36136 271 aaKnown RBP3.1□□□□□ -1.91
SNF8YPL002C UTP30P36144 274 aaKnown RBP3.1□□□□□ -1.91
SNF8YPL002C YBR090CP38253 122 aa3.1□□□□□ -1.91
SNF8YPL002C ERV15P38312 142 aa3.1□□□□□ -1.91
SNF8YPL002C YFR035CP43608 114 aa3.1□□□□□ -1.91
SNF8YPL002C KEG1P43614 200 aa3.1□□□□□ -1.91
SNF8YPL002C LCB3P47013 409 aa3.1□□□□□ -1.91
SNF8YPL002C SBH1P52870 82 aa3.1□□□□□ -1.91
SNF8YPL002C ERG25P53045 309 aa3.1□□□□□ -1.91
SNF8YPL002C YGL230CP53074 147 aa3.1□□□□□ -1.91
SNF8YPL002C HST4P53688 370 aa3.1□□□□□ -1.91
SNF8YPL002C YLR042CQ07990 161 aa3.1□□□□□ -1.91
SNF8YPL002C RAD28Q12021 506 aa3.1□□□□□ -1.91
SNF8YPL002C YGK3Q12222 375 aaPredicted RBP3.1□□□□□ -1.91
SNF8YPL002C UTP23Q12339 254 aaKnown RBP3.1□□□□□ -1.91
SNF8YPL002C TFC7Q12415 435 aa3.1□□□□□ -1.91
SNF8YPL002C BOL1Q3E793 110 aa3.1□□□□□ -1.91
SNF8YPL002C SEC4P07560 215 aaKnown RBP3.09□□□□□ -1.91
SNF8YPL002C RPL16BP26785 198 aaKnown RBP3.09□□□□□ -1.91
SNF8YPL002C LDS1P31379 325 aa3.09□□□□□ -1.91
SNF8YPL002C SWD3P38123 315 aa3.09□□□□□ -1.91
SNF8YPL002C RPL14BP38754 138 aaKnown RBP3.09□□□□□ -1.91
SNF8YPL002C GEP4P38812 185 aa3.09□□□□□ -1.91
SNF8YPL002C HPA3P39979 161 aa3.09□□□□□ -1.91
SNF8YPL002C SPC25P40014 221 aa3.09□□□□□ -1.91
SNF8YPL002C WWM1P43582 211 aaKnown RBP3.09□□□□□ -1.91
SNF8YPL002C YGR219WP53307 113 aa3.09□□□□□ -1.91
SNF8YPL002C LPP1Q04396 274 aa3.09□□□□□ -1.91
SNF8YPL002C YPL119C-AQ3E751 87 aa3.09□□□□□ -1.91
SNF8YPL002C YNL277W-AQ3E7Z0 62 aa3.09□□□□□ -1.91
SNF8YPL002C YCL021W-AQ96VH3 125 aa3.09□□□□□ -1.91
SNF8YPL002C ADH1P00330 348 aaKnown RBP3.08□□□□□ -1.92
SNF8YPL002C RPL9AP05738 191 aaKnown RBP3.08□□□□□ -1.92
SNF8YPL002C COX9P07255 59 aa3.08□□□□□ -1.92
SNF8YPL002C SPO13P23624 291 aa3.08□□□□□ -1.92
SNF8YPL002C FMT1P32785 401 aa3.08□□□□□ -1.92
SNF8YPL002C ALK2P32789 676 aaPredicted RBP3.08□□□□□ -1.92
SNF8YPL002C SPT4P32914 102 aaPredicted RBP3.08□□□□□ -1.92
SNF8YPL002C SSS1P35179 80 aa3.08□□□□□ -1.92
SNF8YPL002C APS1P35181 156 aa3.08□□□□□ -1.92
SNF8YPL002C POP8P38208 133 aa3.08□□□□□ -1.92
SNF8YPL002C TRS20P38334 175 aa3.08□□□□□ -1.92
SNF8YPL002C LAG1P38703 411 aa3.08□□□□□ -1.92
SNF8YPL002C RPB11P38902 120 aa3.08□□□□□ -1.92
SNF8YPL002C CRH1P53301 507 aa3.08□□□□□ -1.92
SNF8YPL002C PAU12P53343 120 aa3.08□□□□□ -1.92
SNF8YPL002C LSM7P53905 115 aaKnown RBP3.08□□□□□ -1.92
SNF8YPL002C THI74Q04083 370 aa3.08□□□□□ -1.92
SNF8YPL002C SHH3Q04487 196 aa3.08□□□□□ -1.92
SNF8YPL002C MEU1Q07938 337 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
SNF8YPL002C DGA1Q08650 418 aa3.08□□□□□ -1.92
SNF8YPL002C RPL13AQ12690 199 aaPredicted RBP3.08□□□□□ -1.92
SNF8YPL002C YOR192C-CQ3E736 78 aa3.08□□□□□ -1.92
SNF8YPL002C YEL009C-AA0A023PZF2 135 aa3.07□□□□□ -1.92
SNF8YPL002C TIR1P10863 254 aa3.07□□□□□ -1.92
SNF8YPL002C ATR1P13090 542 aa3.07□□□□□ -1.92
SNF8YPL002C HAP3P13434 144 aa3.07□□□□□ -1.92
SNF8YPL002C FUN14P18411 198 aa3.07□□□□□ -1.92
SNF8YPL002C ROX3P25046 220 aa3.07□□□□□ -1.92
SNF8YPL002C YCR022CP25620 114 aa3.07□□□□□ -1.92
SNF8YPL002C PAU24P38155 120 aa3.07□□□□□ -1.92
SNF8YPL002C LSM2P38203 95 aaKnown RBP3.07□□□□□ -1.92
SNF8YPL002C MBA1P38300 278 aa3.07□□□□□ -1.92
SNF8YPL002C RPL13BP40212 199 aaKnown RBP3.07□□□□□ -1.92
SNF8YPL002C YIL059CP40520 121 aa3.07□□□□□ -1.92
SNF8YPL002C SFT1P43682 97 aa3.07□□□□□ -1.92
SNF8YPL002C AIM25P47140 327 aa3.07□□□□□ -1.92
SNF8YPL002C YMR181CQ03231 154 aa3.07□□□□□ -1.92
SNF8YPL002C YLR412C-AQ3E742 68 aa3.07□□□□□ -1.92
SNF8YPL002C MRPL38P35996 138 aaPredicted RBP3.06□□□□□ -1.92
SNF8YPL002C ATG18P43601 500 aa3.06□□□□□ -1.92
SNF8YPL002C YFR045WP43617 309 aa3.06□□□□□ -1.92
SNF8YPL002C DAN1P47178 298 aa3.06□□□□□ -1.92
SNF8YPL002C YPS5P53057 165 aa3.06□□□□□ -1.92
SNF8YPL002C VHT1P53241 593 aa3.06□□□□□ -1.92
SNF8YPL002C NMA1Q06178 401 aaKnown RBP3.06□□□□□ -1.92
SNF8YPL002C PRR2Q12310 699 aa3.06□□□□□ -1.92
SNF8YPL002C ISD11Q6Q560 94 aa3.06□□□□□ -1.92
SNF8YPL002C ATP5P09457 212 aa3.05□□□□□ -1.92
SNF8YPL002C UBC5P15732 148 aa3.05□□□□□ -1.92
SNF8YPL002C RPB3P16370 318 aaKnown RBP3.05□□□□□ -1.92
SNF8YPL002C SRP21P32342 167 aa3.05□□□□□ -1.92
SNF8YPL002C EMP24P32803 203 aaKnown RBP3.05□□□□□ -1.92
SNF8YPL002C NRG2P38082 220 aa3.05□□□□□ -1.92
SNF8YPL002C YBR013CP38215 129 aa3.05□□□□□ -1.92
SNF8YPL002C BUD25P85052 153 aa3.05□□□□□ -1.92
SNF8YPL002C YMR252CQ04814 134 aa3.05□□□□□ -1.92
SNF8YPL002C YPS3Q12303 508 aa3.05□□□□□ -1.92
SNF8YPL002C MRS4P23500 304 aa3.04□□□□□ -1.92
SNF8YPL002C PAU2P32612 120 aa3.04□□□□□ -1.92
SNF8YPL002C YEL045CP32616 141 aa3.04□□□□□ -1.92
SNF8YPL002C RPL14AP36105 138 aaKnown RBP3.04□□□□□ -1.92
SNF8YPL002C YKR070WP36151 352 aaKnown RBP3.04□□□□□ -1.92
SNF8YPL002C TEM1P38987 245 aa3.04□□□□□ -1.92
SNF8YPL002C PRM5P40476 318 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms