RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeastyeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT1YOR166C YNL277W-AQ3E7Z0 62 aa0.55□□□□□ -2.32
SWT1YOR166C SLH1P53327 1967 aaKnown RBP0.54□□□□□ -2.32
SWT1YOR166C RAD50P12753 1312 aa0.54□□□□□ -2.32
SWT1YOR166C RPO41P13433 1351 aaKnown RBP0.54□□□□□ -2.32
SWT1YOR166C MRP49P32388 137 aa0.54□□□□□ -2.32
SWT1YOR166C HYM1P32464 399 aa0.54□□□□□ -2.32
SWT1YOR166C RPL14AP36105 138 aaKnown RBP0.54□□□□□ -2.32
SWT1YOR166C RPL14BP38754 138 aaKnown RBP0.54□□□□□ -2.32
SWT1YOR166C YMR141CP40211 102 aa0.54□□□□□ -2.32
SWT1YOR166C HPM1P40481 377 aa0.54□□□□□ -2.32
SWT1YOR166C SFT1P43682 97 aa0.54□□□□□ -2.32
SWT1YOR166C YGR017WP53210 297 aa0.54□□□□□ -2.32
SWT1YOR166C ELC1Q03071 99 aa0.54□□□□□ -2.32
SWT1YOR166C SDH7Q04401 133 aa0.54□□□□□ -2.32
SWT1YOR166C SPC24Q04477 213 aa0.54□□□□□ -2.32
SWT1YOR166C NKP2Q06162 153 aa0.54□□□□□ -2.32
SWT1YOR166C FRQ1Q06389 190 aa0.54□□□□□ -2.32
SWT1YOR166C WIP1Q2V2P8 89 aa0.54□□□□□ -2.32
SWT1YOR166C KTI11Q3E840 82 aa0.54□□□□□ -2.32
SWT1YOR166C SCS22Q6Q595 175 aa0.54□□□□□ -2.32
SWT1YOR166C Q0144Q9ZZW2 109 aa0.54□□□□□ -2.32
SWT1YOR166C MDS3P53094 1487 aa0.53□□□□□ -2.32
SWT1YOR166C PFY1P07274 126 aa0.53□□□□□ -2.32
SWT1YOR166C RPS1BP23248 255 aaKnown RBP0.53□□□□□ -2.32
SWT1YOR166C RPS1AP33442 255 aaKnown RBP0.53□□□□□ -2.32
SWT1YOR166C VMA7P39111 118 aa0.53□□□□□ -2.32
SWT1YOR166C LSM8P47093 109 aaKnown RBP0.53□□□□□ -2.32
SWT1YOR166C MYO2P19524 1574 aaKnown RBP0.53□□□□□ -2.33
SWT1YOR166C COX5BP00425 151 aa0.52□□□□□ -2.33
SWT1YOR166C MRPL44P19956 98 aa0.52□□□□□ -2.33
SWT1YOR166C FYV5P25585 152 aa0.52□□□□□ -2.33
SWT1YOR166C YCR050CP25630 102 aa0.52□□□□□ -2.33
SWT1YOR166C SFT2P38166 215 aa0.52□□□□□ -2.33
SWT1YOR166C HHY1P39982 102 aa0.52□□□□□ -2.33
SWT1YOR166C GAT4P40569 121 aa0.52□□□□□ -2.33
SWT1YOR166C PHS1P40857 217 aa0.52□□□□□ -2.33
SWT1YOR166C DIE2P50076 525 aa0.52□□□□□ -2.33
SWT1YOR166C AIM11P87275 137 aa0.52□□□□□ -2.33
SWT1YOR166C APS2Q00381 147 aa0.52□□□□□ -2.33
SWT1YOR166C TVP18Q04767 167 aa0.52□□□□□ -2.33
SWT1YOR166C SOM1Q05676 74 aa0.52□□□□□ -2.33
SWT1YOR166C NAT5Q08689 176 aa0.52□□□□□ -2.33
SWT1YOR166C YOR385WQ08909 290 aa0.52□□□□□ -2.33
SWT1YOR166C YLR118CQ12354 227 aa0.52□□□□□ -2.33
SWT1YOR166C YIR021W-AQ3E739 70 aa0.52□□□□□ -2.33
SWT1YOR166C YLR099W-AQ3E798 87 aa0.52□□□□□ -2.33
SWT1YOR166C CMC4Q3E7A9 73 aa0.52□□□□□ -2.33
SWT1YOR166C DDP1Q99321 188 aaKnown RBP0.52□□□□□ -2.33
SWT1YOR166C YAL064WP39711 94 aa0.51□□□□□ -2.33
SWT1YOR166C YCL001W-AP87012 153 aa0.51□□□□□ -2.33
SWT1YOR166C SAE3P89114 91 aa0.51□□□□□ -2.33
SWT1YOR166C ARL3Q02804 198 aa0.51□□□□□ -2.33
SWT1YOR166C YOR304C-AO14468 76 aa0.5□□□□□ -2.33
SWT1YOR166C QCR10P37299 77 aa0.5□□□□□ -2.33
SWT1YOR166C MPC1P53157 130 aaKnown RBP0.5□□□□□ -2.33
SWT1YOR166C BRP1P53194 125 aa0.5□□□□□ -2.33
SWT1YOR166C RUB1Q03919 77 aa0.5□□□□□ -2.33
SWT1YOR166C LDB18Q07887 179 aa0.5□□□□□ -2.33
SWT1YOR166C SPP41P38904 1435 aa0.5□□□□□ -2.33
SWT1YOR166C ADK1P07170 222 aaKnown RBP0.49□□□□□ -2.33
SWT1YOR166C PAU21P0CE86 164 aa0.49□□□□□ -2.33
SWT1YOR166C PAU22P0CE87 164 aa0.49□□□□□ -2.33
SWT1YOR166C YKL044WP36092 106 aa0.49□□□□□ -2.33
SWT1YOR166C RPB11P38902 120 aa0.49□□□□□ -2.33
SWT1YOR166C YER137CP40083 148 aaKnown RBP0.49□□□□□ -2.33
SWT1YOR166C YGL149WP53116 101 aa0.49□□□□□ -2.33
SWT1YOR166C YPL067CQ02754 198 aa0.49□□□□□ -2.33
SWT1YOR166C FCF2Q12035 217 aaPredicted RBP0.49□□□□□ -2.33
SWT1YOR166C YOR097CQ12274 175 aaPredicted RBP0.49□□□□□ -2.33
SWT1YOR166C GTT2Q12390 233 aa0.49□□□□□ -2.33
SWT1YOR166C YOR376W-AQ3E805 51 aa0.49□□□□□ -2.33
SWT1YOR166C UBR1P19812 1950 aa0.49□□□□□ -2.33
SWT1YOR166C SNT2P53127 1403 aa0.49□□□□□ -2.33
SWT1YOR166C TRM732Q03496 1420 aa0.49□□□□□ -2.33
SWT1YOR166C RTC6O14464 93 aa0.48□□□□□ -2.33
SWT1YOR166C YGL014C-AP0C5N1 53 aa0.48□□□□□ -2.33
SWT1YOR166C YER039C-AP0CD97 72 aa0.48□□□□□ -2.33
SWT1YOR166C HAP3P13434 144 aa0.48□□□□□ -2.33
SWT1YOR166C NMT1P14743 455 aa0.48□□□□□ -2.33
SWT1YOR166C SEC59P20048 519 aa0.48□□□□□ -2.33
SWT1YOR166C YCR099CP25657 155 aa0.48□□□□□ -2.33
SWT1YOR166C GSP1P32835 219 aaKnown RBP0.48□□□□□ -2.33
SWT1YOR166C LHP1P33399 275 aaKnown RBP0.48□□□□□ -2.33
SWT1YOR166C ATG8P38182 117 aaRIP-Chip data0.48□□□□□ -2.33not detected
SWT1YOR166C HSP10P38910 106 aa0.48□□□□□ -2.33
SWT1YOR166C SNF11P38956 169 aa0.48□□□□□ -2.33
SWT1YOR166C YAR029WP39549 74 aa0.48□□□□□ -2.33
SWT1YOR166C RGI1P40043 161 aaPredicted RBP0.48□□□□□ -2.33
SWT1YOR166C YFR035CP43608 114 aa0.48□□□□□ -2.33
SWT1YOR166C ERV14P53173 138 aa0.48□□□□□ -2.33
SWT1YOR166C YLR042CQ07990 161 aa0.48□□□□□ -2.33
SWT1YOR166C RTR2Q12378 196 aa0.48□□□□□ -2.33
SWT1YOR166C MHF1Q3E835 90 aa0.48□□□□□ -2.33
SWT1YOR166C RPL40AP0CH08 128 aaKnown RBP0.47□□□□□ -2.33
SWT1YOR166C RPL40BP0CH09 128 aaKnown RBP0.47□□□□□ -2.33
SWT1YOR166C YHR213WP0CI67 198 aa0.47□□□□□ -2.33
SWT1YOR166C RPL43AP0CX25 92 aaKnown RBP0.47□□□□□ -2.33
SWT1YOR166C RPL43BP0CX26 92 aa0.47□□□□□ -2.33
SWT1YOR166C EMP24P32803 203 aaKnown RBP0.47□□□□□ -2.33
SWT1YOR166C MRPL11P36521 249 aaPredicted RBP0.47□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 33.9 ms