RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE4	YOR035C	RRT1	P38192	103 aa		0.9	□□□□□ -2.27
SHE4	YOR035C	FMP32	P43557	207 aa		0.9	□□□□□ -2.27
SHE4	YOR035C	GRX5	Q02784	150 aa		0.9	□□□□□ -2.27
SHE4	YOR035C	AIM36	Q03798	255 aa		0.9	□□□□□ -2.27
SHE4	YOR035C	YHR214C-D	P0CX93	97 aa		0.89	□□□□□ -2.27
SHE4	YOR035C	SEC14	P24280	304 aa	Known RBP	0.89	□□□□□ -2.27
SHE4	YOR035C	TRS20	P38334	175 aa		0.89	□□□□□ -2.27
SHE4	YOR035C	NSE4	P43124	402 aa		0.89	□□□□□ -2.27
SHE4	YOR035C	YFR035C	P43608	114 aa		0.89	□□□□□ -2.27
SHE4	YOR035C	SED1	Q01589	338 aa		0.89	□□□□□ -2.27
SHE4	YOR035C	UPS1	Q05776	175 aa		0.89	□□□□□ -2.27
SHE4	YOR035C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.89	□□□□□ -2.27	not detected
SHE4	YOR035C	UBC8	P28263	218 aa		0.89	□□□□□ -2.27
SHE4	YOR035C	CLG1	P35190	452 aa		0.89	□□□□□ -2.27
SHE4	YOR035C	YET3	Q07451	203 aa		0.89	□□□□□ -2.27
SHE4	YOR035C	YSF3	P0C074	85 aa	Predicted RBP	0.88	□□□□□ -2.27
SHE4	YOR035C	ATP7	P30902	174 aa		0.88	□□□□□ -2.27
SHE4	YOR035C	YKR041W	P36134	250 aa		0.88	□□□□□ -2.27
SHE4	YOR035C	VPS28	Q02767	242 aa		0.88	□□□□□ -2.27
SHE4	YOR035C	GPI17	Q04080	534 aa		0.88	□□□□□ -2.27
SHE4	YOR035C	MAK5	P38112	773 aa	Predicted RBP	0.88	□□□□□ -2.27
SHE4	YOR035C	MPM1	P40364	252 aa		0.88	□□□□□ -2.27
SHE4	YOR035C	SOL1	P50278	321 aa		0.88	□□□□□ -2.27
SHE4	YOR035C	DML1	Q03652	475 aa		0.88	□□□□□ -2.27
SHE4	YOR035C	EFG1	Q3E705	233 aa	Known RBP	0.88	□□□□□ -2.27
SHE4	YOR035C	YBL010C	P32788	280 aa		0.87	□□□□□ -2.27
SHE4	YOR035C	YBR242W	P38331	238 aa		0.87	□□□□□ -2.27
SHE4	YOR035C	YER121W	P40076	114 aa		0.87	□□□□□ -2.27
SHE4	YOR035C	YIP3	P53633	176 aa		0.87	□□□□□ -2.27
SHE4	YOR035C	HHT1	P61830	136 aa		0.87	□□□□□ -2.27
SHE4	YOR035C	ELP6	Q04868	273 aa		0.87	□□□□□ -2.27
SHE4	YOR035C	YPR203W	Q08994	102 aa		0.87	□□□□□ -2.27
SHE4	YOR035C	ATG41	Q12048	136 aa		0.87	□□□□□ -2.27
SHE4	YOR035C	YMR030W-A	Q3E760	96 aa		0.87	□□□□□ -2.27
SHE4	YOR035C	SUI1	P32911	108 aa	Known RBP	0.86	□□□□□ -2.27
SHE4	YOR035C	NVJ1	P38881	321 aa		0.86	□□□□□ -2.27
SHE4	YOR035C	SEC72	P39742	193 aa	Known RBP	0.86	□□□□□ -2.27
SHE4	YOR035C	RFC2	P40348	353 aa		0.86	□□□□□ -2.27
SHE4	YOR035C	POG1	P40473	351 aa		0.86	□□□□□ -2.27
SHE4	YOR035C	GLR1	P41921	483 aa	Known RBP	0.86	□□□□□ -2.27
SHE4	YOR035C	YHP1	Q04116	353 aa		0.86	□□□□□ -2.27
SHE4	YOR035C	HSP30	P25619	332 aa		0.86	□□□□□ -2.27
SHE4	YOR035C	FIP1	P45976	327 aa		0.86	□□□□□ -2.27
SHE4	YOR035C	TIM13	P53299	105 aa		0.86	□□□□□ -2.27
SHE4	YOR035C	FIT1	Q04433	528 aa		0.86	□□□□□ -2.27
SHE4	YOR035C	LCL2	Q08045	131 aa		0.86	□□□□□ -2.27
SHE4	YOR035C	ROX3	P25046	220 aa		0.85	□□□□□ -2.27
SHE4	YOR035C	ETR1	P38071	380 aa		0.85	□□□□□ -2.27
SHE4	YOR035C	TLG1	Q03322	224 aa		0.85	□□□□□ -2.27
SHE4	YOR035C	HPT1	Q04178	221 aa	Known RBP	0.85	□□□□□ -2.27
SHE4	YOR035C	SUA7	P29055	345 aa	Predicted RBP	0.85	□□□□□ -2.27
SHE4	YOR035C	CPR5	P35176	225 aa		0.85	□□□□□ -2.27
SHE4	YOR035C	EGD2	P38879	174 aa	Known RBP	0.85	□□□□□ -2.27
SHE4	YOR035C	APS3	P47064	194 aa		0.85	□□□□□ -2.27
SHE4	YOR035C	RPL35A	P0CX84	120 aa	Known RBP	0.84	□□□□□ -2.27
SHE4	YOR035C	RPL35B	P0CX85	120 aa	Known RBP	0.84	□□□□□ -2.27
SHE4	YOR035C	FYV4	P38783	130 aa	Predicted RBP	0.84	□□□□□ -2.27
SHE4	YOR035C	JAC1	P53193	184 aa		0.84	□□□□□ -2.27
SHE4	YOR035C	YPR127W	Q06494	345 aa		0.84	□□□□□ -2.27
SHE4	YOR035C	YCL048W-A	Q2V2Q2	79 aa		0.84	□□□□□ -2.27
SHE4	YOR035C	HSP150	P32478	413 aa		0.84	□□□□□ -2.28
SHE4	YOR035C	SRP14	P38985	146 aa		0.84	□□□□□ -2.28
SHE4	YOR035C	CCS1	P40202	249 aa	Known RBP	0.84	□□□□□ -2.28
SHE4	YOR035C	LSM3	P57743	89 aa	Known RBP	0.84	□□□□□ -2.28
SHE4	YOR035C	YKR005C	Q02203	525 aa		0.84	□□□□□ -2.28
SHE4	YOR035C	YOR214C	Q12282	236 aa		0.84	□□□□□ -2.28
SHE4	YOR035C	YOR381W-A	Q3E804	55 aa		0.84	□□□□□ -2.28
SHE4	YOR035C	TRR1	P29509	319 aa	Known RBP	0.83	□□□□□ -2.28
SHE4	YOR035C	AIM18	P38884	321 aa		0.83	□□□□□ -2.28
SHE4	YOR035C	SIP18	P50263	79 aa		0.83	□□□□□ -2.28
SHE4	YOR035C	YNL140C	P53910	189 aa		0.83	□□□□□ -2.28
SHE4	YOR035C	GIM5	Q04493	163 aa		0.83	□□□□□ -2.28
SHE4	YOR035C	RAD51	P25454	400 aa		0.82	□□□□□ -2.28
SHE4	YOR035C	YAR064W	P39563	99 aa		0.82	□□□□□ -2.28
SHE4	YOR035C	YNL200C	P40165	246 aa	Known RBP	0.82	□□□□□ -2.28
SHE4	YOR035C	APQ12	P40532	138 aa		0.82	□□□□□ -2.28
SHE4	YOR035C	TTI2	P47168	421 aa		0.82	□□□□□ -2.28
SHE4	YOR035C	CCC1	P47818	322 aa		0.82	□□□□□ -2.28
SHE4	YOR035C	RAD6	P06104	172 aa		0.81	□□□□□ -2.28
SHE4	YOR035C	CSH1	P38287	376 aa		0.81	□□□□□ -2.28
SHE4	YOR035C	YIL102C	P40488	101 aa		0.81	□□□□□ -2.28
SHE4	YOR035C	NKP2	Q06162	153 aa		0.81	□□□□□ -2.28
SHE4	YOR035C	YNR064C	P53750	290 aa		0.81	□□□□□ -2.28
SHE4	YOR035C	HRD1	Q08109	551 aa		0.81	□□□□□ -2.28
SHE4	YOR035C	DCV1	P43595	202 aa		0.8	□□□□□ -2.28
SHE4	YOR035C	GEP7	P53171	287 aa		0.8	□□□□□ -2.28
SHE4	YOR035C	HSK3	P69852	69 aa		0.8	□□□□□ -2.28
SHE4	YOR035C	YLR050C	Q12155	161 aa	Known RBP	0.8	□□□□□ -2.28
SHE4	YOR035C	CMC2	Q3E7A4	109 aa		0.8	□□□□□ -2.28
SHE4	YOR035C	UGX2	P32772	223 aa		0.79	□□□□□ -2.28
SHE4	YOR035C	FES1	P38260	290 aa		0.79	□□□□□ -2.28
SHE4	YOR035C	MHF1	Q3E835	90 aa		0.79	□□□□□ -2.28
SHE4	YOR035C	VPS51	P36116	164 aa		0.79	□□□□□ -2.28
SHE4	YOR035C	XPT1	P47165	209 aa		0.79	□□□□□ -2.28
SHE4	YOR035C	AVO2	Q04749	426 aa		0.79	□□□□□ -2.28
SHE4	YOR035C	CCW12	Q12127	133 aa		0.79	□□□□□ -2.28
SHE4	YOR035C	SRL3	P36167	246 aa		0.78	□□□□□ -2.28
SHE4	YOR035C	YDL157C	Q12082	118 aa		0.78	□□□□□ -2.28
SHE4	YOR035C	NUF2	P33895	451 aa		0.78	□□□□□ -2.28
SHE4	YOR035C	NCE101	Q02820	53 aa		0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms