RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeastyeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP1YOL006C ECM31P38122 312 aa2.47□□□□□ -2.01
TOP1YOL006C YHR180WP38868 163 aa2.47□□□□□ -2.01
TOP1YOL006C YNR077CP53758 84 aa2.47□□□□□ -2.01
TOP1YOL006C UPS3Q04006 179 aa2.47□□□□□ -2.01
TOP1YOL006C SOM1Q05676 74 aa2.47□□□□□ -2.01
TOP1YOL006C KSH1Q8TGJ3 72 aa2.47□□□□□ -2.01
TOP1YOL006C LYS2P07702 1392 aa2.47□□□□□ -2.01
TOP1YOL006C RPS19AP07280 144 aaKnown RBP2.46□□□□□ -2.02
TOP1YOL006C RPS19BP07281 144 aaPredicted RBP2.46□□□□□ -2.02
TOP1YOL006C UBC4P15731 148 aa2.46□□□□□ -2.02
TOP1YOL006C MIG1P27705 504 aa2.46□□□□□ -2.02
TOP1YOL006C QCR10P37299 77 aa2.46□□□□□ -2.02
TOP1YOL006C PIR1Q03178 341 aa2.46□□□□□ -2.02
TOP1YOL006C RAF1Q06891 181 aa2.46□□□□□ -2.02
TOP1YOL006C YOR015WQ12169 119 aa2.46□□□□□ -2.02
TOP1YOL006C YLR365WQ7LIF2 110 aa2.46□□□□□ -2.02
TOP1YOL006C YSP2Q06681 1438 aa2.46□□□□□ -2.02
TOP1YOL006C EMP24P32803 203 aaKnown RBP2.46□□□□□ -2.02
TOP1YOL006C IPT1P38954 527 aa2.46□□□□□ -2.02
TOP1YOL006C SPO73P40031 143 aa2.46□□□□□ -2.02
TOP1YOL006C RPL13BP40212 199 aaKnown RBP2.46□□□□□ -2.02
TOP1YOL006C YDL241WQ07738 123 aa2.46□□□□□ -2.02
TOP1YOL006C FIT3Q08907 204 aa2.46□□□□□ -2.02
TOP1YOL006C YDR029WQ12111 104 aa2.46□□□□□ -2.02
TOP1YOL006C PIR5P46999 287 aa2.45□□□□□ -2.02
TOP1YOL006C ERV14P53173 138 aa2.45□□□□□ -2.02
TOP1YOL006C YCL001W-AP87012 153 aa2.45□□□□□ -2.02
TOP1YOL006C ATG40Q99325 256 aa2.45□□□□□ -2.02
TOP1YOL006C TIR3P40552 269 aa2.45□□□□□ -2.02
TOP1YOL006C GTT1P40582 234 aa2.45□□□□□ -2.02
TOP1YOL006C YML079WQ03629 201 aa2.45□□□□□ -2.02
TOP1YOL006C GPI19Q04082 140 aa2.45□□□□□ -2.02
TOP1YOL006C IRC19Q07843 230 aa2.45□□□□□ -2.02
TOP1YOL006C ATG41Q12048 136 aa2.45□□□□□ -2.02
TOP1YOL006C TY1B-DR1Q03855 1755 aa2.44□□□□□ -2.02
TOP1YOL006C TY1B-DR3Q99231 1755 aa2.44□□□□□ -2.02
TOP1YOL006C FYV5P25585 152 aa2.44□□□□□ -2.02
TOP1YOL006C SRB6P32570 121 aa2.44□□□□□ -2.02
TOP1YOL006C PHO88P38264 188 aaPredicted RBP2.44□□□□□ -2.02
TOP1YOL006C COA6Q3E846 104 aa2.44□□□□□ -2.02
TOP1YOL006C MIC10Q96VH5 97 aa2.44□□□□□ -2.02
TOP1YOL006C TY1B-NL2Q99337 1749 aaKnown RBP2.44□□□□□ -2.02
TOP1YOL006C YPK9Q12697 1472 aa2.44□□□□□ -2.02
TOP1YOL006C RPS23AP0CX29 145 aaKnown RBP2.43□□□□□ -2.02
TOP1YOL006C RPS23BP0CX30 145 aa2.43□□□□□ -2.02
TOP1YOL006C HMRA1P0CY11 126 aa2.43□□□□□ -2.02
TOP1YOL006C MRPL11P36521 249 aaPredicted RBP2.43□□□□□ -2.02
TOP1YOL006C YEL067CP39978 195 aa2.43□□□□□ -2.02
TOP1YOL006C RPL33BP41056 107 aaKnown RBP2.43□□□□□ -2.02
TOP1YOL006C YOS1Q3E834 85 aa2.43□□□□□ -2.02
TOP1YOL006C YMR082CQ04276 118 aa2.43□□□□□ -2.02
TOP1YOL006C YLR236CA0A023PZG4 107 aa2.42□□□□□ -2.02
TOP1YOL006C MRPL44P19956 98 aa2.42□□□□□ -2.02
TOP1YOL006C YGR269WP40326 108 aa2.42□□□□□ -2.02
TOP1YOL006C MSL1P40567 111 aaPredicted RBP2.42□□□□□ -2.02
TOP1YOL006C YPR013CQ12145 317 aa2.42□□□□□ -2.02
TOP1YOL006C YEL045CP32616 141 aa2.42□□□□□ -2.02
TOP1YOL006C YJL027CP47063 138 aaPredicted RBP2.42□□□□□ -2.02
TOP1YOL006C NMA1Q06178 401 aaKnown RBP2.42□□□□□ -2.02
TOP1YOL006C TOR1P35169 2470 aa2.42□□□□□ -2.02
TOP1YOL006C EMC5P40540 141 aa2.41□□□□□ -2.02
TOP1YOL006C BOL2P53082 120 aa2.41□□□□□ -2.02
TOP1YOL006C GPI11Q06636 219 aa2.41□□□□□ -2.02
TOP1YOL006C MSB2P32334 1306 aa2.41□□□□□ -2.02
TOP1YOL006C YRF1-2P40105 1681 aa2.41□□□□□ -2.02
TOP1YOL006C ECM12O13529 151 aa2.41□□□□□ -2.02
TOP1YOL006C HUR1P45820 110 aa2.41□□□□□ -2.02
TOP1YOL006C YPL067CQ02754 198 aa2.41□□□□□ -2.02
TOP1YOL006C SEN15Q04675 128 aa2.41□□□□□ -2.02
TOP1YOL006C ATG2P53855 1592 aa2.41□□□□□ -2.02
TOP1YOL006C PAU21P0CE86 164 aa2.4□□□□□ -2.02
TOP1YOL006C PAU22P0CE87 164 aa2.4□□□□□ -2.02
TOP1YOL006C MIX14Q04341 121 aa2.4□□□□□ -2.02
TOP1YOL006C ELP6Q04868 273 aa2.4□□□□□ -2.02
TOP1YOL006C YPR195CQ06594 109 aa2.4□□□□□ -2.02
TOP1YOL006C VPS15P22219 1454 aa2.4□□□□□ -2.03
TOP1YOL006C FMT1P32785 401 aa2.4□□□□□ -2.03
TOP1YOL006C YER187WP40102 141 aa2.4□□□□□ -2.03
TOP1YOL006C PEP8P40335 379 aa2.4□□□□□ -2.03
TOP1YOL006C YFL012WP43580 148 aa2.4□□□□□ -2.03
TOP1YOL006C YPI1P43587 155 aa2.4□□□□□ -2.03
TOP1YOL006C CIS3P47001 227 aa2.4□□□□□ -2.03
TOP1YOL006C CUE4Q04201 117 aaPredicted RBP2.4□□□□□ -2.03
TOP1YOL006C HSP10P38910 106 aa2.39□□□□□ -2.03
TOP1YOL006C HPA3P39979 161 aa2.39□□□□□ -2.03
TOP1YOL006C VMA21P41806 77 aa2.39□□□□□ -2.03
TOP1YOL006C IGO1P53897 168 aa2.39□□□□□ -2.03
TOP1YOL006C YMR230W-AQ3E7B5 62 aa2.39□□□□□ -2.03
TOP1YOL006C YLR296WQ05898 108 aa2.39□□□□□ -2.03
TOP1YOL006C YPR153WQ06537 140 aa2.39□□□□□ -2.03
TOP1YOL006C HRT1Q08273 121 aa2.39□□□□□ -2.03
TOP1YOL006C YBR209WP38311 105 aa2.38□□□□□ -2.03
TOP1YOL006C TMC1Q08422 150 aaPredicted RBP2.38□□□□□ -2.03
TOP1YOL006C NAT5Q08689 176 aa2.38□□□□□ -2.03
TOP1YOL006C YPL261CQ08976 102 aa2.38□□□□□ -2.03
TOP1YOL006C YDL157CQ12082 118 aa2.38□□□□□ -2.03
TOP1YOL006C DAD1Q12248 94 aa2.38□□□□□ -2.03
TOP1YOL006C HSP26P15992 214 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
TOP1YOL006C BRP1P53194 125 aa2.37□□□□□ -2.03
TOP1YOL006C FAS1P07149 2051 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms