RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	PEP8	P40335	379 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	VMA21	P41806	77 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	EGT2	P42835	1041 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	SFT1	P43682	97 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	YMR090W	Q04304	227 aa	Known RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	YDR114C	Q04597	100 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	POC4	Q12245	148 aa	Predicted RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	YOR192C-C	Q3E736	78 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	MRS1	P07266	363 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	MDM10	P18409	493 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	COX10	P21592	462 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	BUB2	P26448	306 aa	Predicted RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	RPL14A	P36105	138 aa	Known RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	SHB17	P36136	271 aa	Known RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	MRPL24	P36525	258 aa	Predicted RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	RPL14B	P38754	138 aa	Known RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	YIL059C	P40520	121 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	PFS2	P42841	465 aa	Known RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	TAD2	P47058	250 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	TDA4	P47153	279 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	YDR209C	Q03480	137 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	RIM9	Q04734	239 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	NCE102	Q12207	173 aa	RIP-Chip data	1.24	□□□□□ -2.21	not detected
SSK2	YNR031C	YLR118C	Q12354	227 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	TSC3	Q3E790	80 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	HTL1	Q9URQ5	78 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	CYR1	P08678	2026 aa	Known RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	RPL31A	P0C2H8	113 aa	Known RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	RPL31B	P0C2H9	113 aa	Known RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	CKS1	P20486	150 aa	Known RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	RPL16B	P26785	198 aa	Known RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	ECM34	P38728	170 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	MPC1	P53157	130 aa	Known RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	THG1	P53215	237 aa	Known RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	YMR252C	Q04814	134 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	YDR029W	Q12111	104 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	Q0255	P03881	472 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	TIR1	P10863	254 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	MXR2	P25566	168 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	FMT1	P32785	401 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	ZRT3	P34240	503 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	PHO89	P38361	574 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	YAR029W	P39549	74 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	ARP3	P47117	449 aa	Known RBP	1.23	□□□□□ -2.21
SSK2	YNR031C	MMS2	P53152	137 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	SDS23	P53172	527 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	PDR17	P53844	350 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	GPI19	Q04082	140 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	SPG4	Q04438	115 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	NMA1	Q06178	401 aa	Known RBP	1.23	□□□□□ -2.21
SSK2	YNR031C	ATO3	Q12359	275 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	YLR111W	Q12528	110 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	YOR020W-A	Q3E824	90 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	SIR2	P06700	562 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	RPL2A	P0CX45	254 aa	Known RBP	1.23	□□□□□ -2.21
SSK2	YNR031C	RPL2B	P0CX46	254 aa	Known RBP	1.23	□□□□□ -2.21
SSK2	YNR031C	HYP2	P23301	157 aa	Known RBP	1.23	□□□□□ -2.21
SSK2	YNR031C	YBL059W	P34224	193 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	PAN3	P36102	679 aa	Predicted RBP	1.23	□□□□□ -2.21
SSK2	YNR031C	UMP1	P38293	148 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	MPC2	P38857	129 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	CPD1	P53314	239 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	HST4	P53688	370 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	DAD4	P69851	72 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	CYT2	Q00873	224 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	YML079W	Q03629	201 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	YML018C	Q03730	393 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	YOR105W	Q08504	108 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	YLR126C	Q12288	251 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	YCL021W-A	Q96VH3	125 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	YJL197C-A	P0C5P0	93 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	MRP17	P28778	131 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	AHT1	P29589	182 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	HSP10	P38910	106 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	SPC25	P40014	221 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	NCE101	Q02820	53 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	VPS71	Q03433	280 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	YOR015W	Q12169	119 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	YPS3	Q12303	508 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	HUT1	Q12520	339 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	ODC2	Q99297	307 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	Q0297	Q9ZZV8	51 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	CDC39	P25655	2108 aa	Known RBP	1.23	□□□□□ -2.21
SSK2	YNR031C	YCR006C	P25350	157 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	RPB7	P34087	171 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	YNL198C	P40166	100 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	YGL230C	P53074	147 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	YPL264C	Q08980	353 aa		1.23	□□□□□ -2.21
SSK2	YNR031C	YER145C-A	A0A023PYF4	145 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	SEC4	P07560	215 aa	Known RBP	1.22	□□□□□ -2.21
SSK2	YNR031C	MTR2	P34232	184 aa	Known RBP	1.22	□□□□□ -2.21
SSK2	YNR031C	FLO5	P38894	1075 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	VTC1	P40046	129 aa	RIP-Chip data	1.22	□□□□□ -2.21	not detected
SSK2	YNR031C	YFR045W	P43617	309 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	VPS55	P47111	140 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	YOR186W	Q08560	144 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	TIM18	Q08749	192 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	DAD1	Q12248	94 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	VMA9	Q3E7B6	73 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	UBC5	P15732	148 aa		1.22	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 87.7 ms