RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	YHR140W	P38842	239 aa		5.95	□□□□□ -1.46
MSB3	YNL293W	YAR029W	P39549	74 aa		5.95	□□□□□ -1.46
MSB3	YNL293W	YNR071C	P53757	342 aa		5.95	□□□□□ -1.46
MSB3	YNL293W	YPS3	Q12303	508 aa		5.95	□□□□□ -1.46
MSB3	YNL293W	YLR149C	Q99296	730 aa		5.95	□□□□□ -1.46
MSB3	YNL293W	STT4	P37297	1900 aa		5.95	□□□□□ -1.46
MSB3	YNL293W	YIL014C-A	Q02598	104 aa		5.95	□□□□□ -1.46
MSB3	YNL293W	ROT1	Q03691	256 aa		5.95	□□□□□ -1.46
MSB3	YNL293W	YPL038W-A	Q3E7B4	63 aa		5.95	□□□□□ -1.46
MSB3	YNL293W	RPS2	P25443	254 aa	Known RBP	5.94	□□□□□ -1.46
MSB3	YNL293W	SDS23	P53172	527 aa		5.94	□□□□□ -1.46
MSB3	YNL293W	CPD1	P53314	239 aa		5.94	□□□□□ -1.46
MSB3	YNL293W	MCH4	Q08268	501 aa		5.94	□□□□□ -1.46
MSB3	YNL293W	QCR9	P22289	66 aa		5.93	□□□□□ -1.46
MSB3	YNL293W	SMP1	P38128	452 aa		5.93	□□□□□ -1.46
MSB3	YNL293W	OM14	P38325	134 aa		5.93	□□□□□ -1.46
MSB3	YNL293W	MBB1	P39534	108 aa		5.93	□□□□□ -1.46
MSB3	YNL293W	YPL073C	P40323	161 aa		5.93	□□□□□ -1.46
MSB3	YNL293W	SKI6	P46948	246 aa	Predicted RBP	5.93	□□□□□ -1.46
MSB3	YNL293W	CSL4	P53859	292 aa	Predicted RBP	5.93	□□□□□ -1.46
MSB3	YNL293W	BNI1	P41832	1953 aa		5.93	□□□□□ -1.46
MSB3	YNL293W	FIG2	P25653	1609 aa		5.93	□□□□□ -1.46
MSB3	YNL293W	BUD8	P41698	603 aa		5.93	□□□□□ -1.46
MSB3	YNL293W	CIS3	P47001	227 aa		5.93	□□□□□ -1.46
MSB3	YNL293W	YHR139C-A	O13536	103 aa		5.92	□□□□□ -1.46
MSB3	YNL293W	QRI5	P32344	111 aa		5.92	□□□□□ -1.46
MSB3	YNL293W	FZF1	P32805	299 aa		5.92	□□□□□ -1.46
MSB3	YNL293W	YIL163C	P40448	117 aa		5.92	□□□□□ -1.46
MSB3	YNL293W	VPS55	P47111	140 aa		5.92	□□□□□ -1.46
MSB3	YNL293W	MST27	P53176	234 aa		5.92	□□□□□ -1.46
MSB3	YNL293W	SPG3	Q04398	127 aa	Predicted RBP	5.92	□□□□□ -1.46
MSB3	YNL293W	YLR281C	Q05863	155 aa		5.92	□□□□□ -1.46
MSB3	YNL293W	GAT3	Q07928	141 aa		5.92	□□□□□ -1.46
MSB3	YNL293W	MIM1	Q08176	113 aa		5.92	□□□□□ -1.46
MSB3	YNL293W	YMR316C-A	I2HB70	103 aa		5.91	□□□□□ -1.46
MSB3	YNL293W	GAL2	P13181	574 aa		5.91	□□□□□ -1.46
MSB3	YNL293W	DAT1	P13483	248 aa	Known RBP	5.91	□□□□□ -1.46
MSB3	YNL293W	VEL1	P53058	206 aa		5.91	□□□□□ -1.46
MSB3	YNL293W	YMR175W-A	Q3E766	64 aa		5.91	□□□□□ -1.46
MSB3	YNL293W	TDA7	P53882	636 aa	Predicted RBP	5.91	□□□□□ -1.46
MSB3	YNL293W	YPL062W	Q02781	134 aa		5.91	□□□□□ -1.46
MSB3	YNL293W	CSR2	Q12734	1121 aa		5.91	□□□□□ -1.46
MSB3	YNL293W	LAA1	P39526	2014 aa		5.91	□□□□□ -1.46
MSB3	YNL293W	CSE2	P33308	149 aa		5.9	□□□□□ -1.46
MSB3	YNL293W	ERG2	P32352	222 aa		5.89	□□□□□ -1.47
MSB3	YNL293W	ECM15	P35195	104 aa		5.89	□□□□□ -1.47
MSB3	YNL293W	YEL073C	P39974	107 aa		5.89	□□□□□ -1.47
MSB3	YNL293W	FIP1	P45976	327 aa		5.89	□□□□□ -1.47
MSB3	YNL293W	YPR011C	Q12251	326 aa		5.89	□□□□□ -1.47
MSB3	YNL293W	Q0255	P03881	472 aa		5.89	□□□□□ -1.47
MSB3	YNL293W	APS1	P35181	156 aa		5.89	□□□□□ -1.47
MSB3	YNL293W	RRT13	P40042	185 aa		5.89	□□□□□ -1.47
MSB3	YNL293W	IST3	P40565	148 aa	Predicted RBP	5.89	□□□□□ -1.47
MSB3	YNL293W	YFR054C	P43622	192 aa		5.89	□□□□□ -1.47
MSB3	YNL293W	HTL1	Q9URQ5	78 aa		5.89	□□□□□ -1.47
MSB3	YNL293W	AQY1	P0CD91	305 aa		5.88	□□□□□ -1.47
MSB3	YNL293W	RPL18A	P0CX49	186 aa	Known RBP	5.88	□□□□□ -1.47
MSB3	YNL293W	RPL18B	P0CX50	186 aa	Known RBP	5.88	□□□□□ -1.47
MSB3	YNL293W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	5.88	□□□□□ -1.47	not detected
MSB3	YNL293W	YGR269W	P40326	108 aa		5.88	□□□□□ -1.47
MSB3	YNL293W	YOR186W	Q08560	144 aa		5.88	□□□□□ -1.47
MSB3	YNL293W	MET32	Q12041	191 aa		5.88	□□□□□ -1.47
MSB3	YNL293W	RPL23A	P0CX41	137 aa	Known RBP	5.87	□□□□□ -1.47
MSB3	YNL293W	RPL23B	P0CX42	137 aa	Known RBP	5.87	□□□□□ -1.47
MSB3	YNL293W	BET1	P22804	142 aa		5.87	□□□□□ -1.47
MSB3	YNL293W	PCL2	P25693	308 aa		5.87	□□□□□ -1.47
MSB3	YNL293W	YMR007W	Q03675	126 aa		5.87	□□□□□ -1.47
MSB3	YNL293W	LSM6	Q06406	86 aa	Known RBP	5.87	□□□□□ -1.47
MSB3	YNL293W	SUT2	Q12286	268 aa		5.87	□□□□□ -1.47
MSB3	YNL293W	IGO2	Q9P305	131 aa		5.87	□□□□□ -1.47
MSB3	YNL293W	UBC4	P15731	148 aa		5.87	□□□□□ -1.47
MSB3	YNL293W	IMP1	P28627	190 aa		5.87	□□□□□ -1.47
MSB3	YNL293W	REC114	P32841	428 aa		5.87	□□□□□ -1.47
MSB3	YNL293W	YDR209C	Q03480	137 aa		5.87	□□□□□ -1.47
MSB3	YNL293W	SPO24	Q3E752	67 aa		5.87	□□□□□ -1.47
MSB3	YNL293W	FLO9	P39712	1322 aa		5.86	□□□□□ -1.47
MSB3	YNL293W	PIS1	P06197	220 aa	Known RBP	5.86	□□□□□ -1.47
MSB3	YNL293W	RFA2	P26754	273 aa	Known RBP	5.86	□□□□□ -1.47
MSB3	YNL293W	GGC1	P38988	300 aa		5.86	□□□□□ -1.47
MSB3	YNL293W	GLO1	P50107	326 aa		5.86	□□□□□ -1.47
MSB3	YNL293W	YMR317W	Q04893	1140 aa		5.86	□□□□□ -1.47
MSB3	YNL293W	YOR387C	Q08910	206 aa		5.86	□□□□□ -1.47
MSB3	YNL293W	SHH4	Q06236	168 aa		5.85	□□□□□ -1.47
MSB3	YNL293W	YDR381C-A	Q3E6R5	114 aa		5.85	□□□□□ -1.47
MSB3	YNL293W	MRPL31	P14063	131 aa	Predicted RBP	5.84	□□□□□ -1.47
MSB3	YNL293W	SRX1	P36077	127 aa		5.84	□□□□□ -1.47
MSB3	YNL293W	SFT2	P38166	215 aa		5.84	□□□□□ -1.47
MSB3	YNL293W	CSH1	P38287	376 aa		5.84	□□□□□ -1.47
MSB3	YNL293W	DSE2	P38844	325 aa		5.84	□□□□□ -1.47
MSB3	YNL293W	OST1	P41543	476 aa	Known RBP	5.84	□□□□□ -1.47
MSB3	YNL293W	YPI1	P43587	155 aa		5.84	□□□□□ -1.47
MSB3	YNL293W	HAL1	Q01766	294 aa		5.84	□□□□□ -1.47
MSB3	YNL293W	TIM18	Q08749	192 aa		5.84	□□□□□ -1.47
MSB3	YNL293W	RLM1	Q12224	676 aa		5.84	□□□□□ -1.47
MSB3	YNL293W	EMC6	Q12431	108 aa		5.84	□□□□□ -1.47
MSB3	YNL293W	USV1	Q12132	391 aa		5.84	□□□□□ -1.48
MSB3	YNL293W	RPL30	P14120	105 aa	Known RBP	5.83	□□□□□ -1.48
MSB3	YNL293W	LST8	P41318	303 aa		5.83	□□□□□ -1.48
MSB3	YNL293W	FPR2	P32472	135 aa		5.82	□□□□□ -1.48
MSB3	YNL293W	RPP1	P38786	293 aa		5.82	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms